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KJC3_008119-T1, KJC3_008119-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008119-T1
Unique NameKJC3_008119-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1023882..1025428-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008119-T1 ID=KJC3_008119-T1|Name=KJC3_008119-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1547bp|location=Sequence derived from alignment at ch6:1023882..1025428- (Aspergillus niger KJC3)
CGCCGCCGTCTCCCCTTACCATCGCGATTCGAGAACCGTTGGTTCAAGCA
ACATTGTCCGAACAGGGAAACCCCTCCAGCAACCTACACAATGACCCTCG
AAAACGACGCGGTCGCTGGTGCCACCATTGAGCTCCTCGAGACCCGTCTC
CGGCGCCTCACATACCTCTTGACCGGCGATGCAAACTGGACTGGCAATCC
CACGCCGCCCGCAAAGCCCGCATCTCTGGACGACAGCGTCTCGCGCCGTC
TTCTTCGCCTAGAGAGGGACCTGGAAAAGCTGAGCAGAAACATCCCCGCC
GTCCGGGACGTTCTCAGTCTTCGTATGCTGACCTTCTTAATGTACGGGTT
GATCAATAGCTAAACTGTTTTCGTCCAGACGACCGCTTCCCCGACCTCTT
CCGCCAAACACCTTCCAAATCACTCCCTGAAAGTCTATCGACGCAAAATC
TCGCCTCGATTGTCTTATCCTACGCTTCCGCATTCCCCGAAACCGCGTCT
CGACTTACTTCATTGAATGACCTCCCCATCCCGAATGCCGAGACTTCGGC
GTCGCTTATCCAGCTCCAACCACGACTTGACCAGTTGGCGCAGACTCAGG
ATGACCAGGCCAAACAAATCTCCGAGCTACGTGTACGGTCTGCTCGAGTC
TTGCAGCGATGGTATGAAGTGGCGCTGGTTAGTGGCGGTGAATGCTGGGC
CGAATGGGAAGGAAGACTTGAGGATGTGGAAAGGGAGGTCAAACGGGAGG
AAGTGGTGAGGGAGCGGCGAGCGAAGGAGCTGTGAAGATGAGGCAGTTGC
TTTTTCTTTTGGATCCCTCTTCCTTTCAGCGTGCTTGGCTTGTGATATGA
TATGATACCTCTTTGTTTGCTCTGGTCATGATTAAAGGTGGACGTTGCAG
GTGAGAATGGGGTGTAGTAAGTAATCTTTTCTTCTATGTAGACGAACGGG
CCCTTCATCCATTGAGAGACATAGTCTTGTGTGGCAATGATTACTTAGTG
GACAAAAAGGTCGTTGAAAATCATCAGTCCTTTCTTTTCTTTCTTTTGGT
TGGATATGAAACAGACCGACCGGCCTTTGGTCTTGCTCCCTTCGGGATCG
AACAAAGAGCGGCAGCCGGGTTGCAGTATACCGACGCACGGAGAGGATCT
GGACTCCCGGCAGAACTGATCGACCACGCCGGAACCCGAAGGGAAGAATG
GGCATACCTATCTGGTCGCAGTGATTCGTGTGTACTCCATAGCTAGTGGG
GTATTTACAATACCTGCTGAAAGTAAAGGTACCTGCTCATTTCGAGGACA
CAAGTCACCTTACCTTACGGAGTACATACATTGTACATATTGGAGACGAA
GACCCACGGGGAAGAGTCCCGACCGGGTACTTTTGTTTTTCTCGTGATGT
CGACCCTTGCATGAGAAGCATGAACATGCGTTGTGATTGTGATTGTGATG
CGAAGAAGAGCCCGTGTGAAATATCCTTTGTTTGGCCCTACTTGAAACTC
CTCCATGTATATATTGAGTAATGCTTGGACAGAGAAGGGAGAGCGCA
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Coding sequence (CDS) from alignment at ch6:1023882..1025428-

>KJC3_008119-T1 ID=KJC3_008119-T1|Name=KJC3_008119-T1|organism=Aspergillus niger KJC3|type=CDS|length=1278bp|location=Sequence derived from alignment at ch6:1023882..1025428- (Aspergillus niger KJC3)
ACGACCGCTTCCCCGACCTCTTCCGCCAAACACCTTCCAAATCACTCCCT
GAAAGTCTATCGACGCAAAATCTCGCCTCGATTGTCTTATCCTACGCTTC
CGCATTCCCCGAAACCGCGTCTCGACTTACTTCATTGAATGACCTCCCCA
TCCCGAATGCCGAGACTTCGGCGTCGCTTATCCAGCTCCAACCACGACTT
GACCAGTTGGCGCAGACTCAGGATGACCAGGCCAAACAAATCTCCGAGCT
ACGTGTACGGTCTGCTCGAGTCTTGCAGCGATGGTATGAAGTGGCGCTGG
TTAGTGGCGGTGAATGCTGGGCCGAATGGGAAGGAAGACTTGAGGATGTG
GAAAGGGAGGTCAAACGGGAGGAAGTGGTGAGGGAGCGGCGAGCGAAGGA
GCTGTGAATGACCCTCGAAAACGACGCGGTCGCTGGTGCCACCATTGAGC
TCCTCGAGACCCGTCTCCGGCGCCTCACATACCTCTTGACCGGCGATGCA
AACTGGACTGGCAATCCCACGCCGCCCGCAAAGCCCGCATCTCTGGACGA
CAGCGTCTCGCGCCGTCTTCTTCGCCTAGAGAGGGACCTGGAAAAGCTGA
GCAGAAACATCCCCGCCGTCCGGGACGTTCTCAGTCTTCACGACCGCTTC
CCCGACCTCTTCCGCCAAACACCTTCCAAATCACTCCCTGAAAGTCTATC
GACGCAAAATCTCGCCTCGATTGTCTTATCCTACGCTTCCGCATTCCCCG
AAACCGCGTCTCGACTTACTTCATTGAATGACCTCCCCATCCCGAATGCC
GAGACTTCGGCGTCGCTTATCCAGCTCCAACCACGACTTGACCAGTTGGC
GCAGACTCAGGATGACCAGGCCAAACAAATCTCCGAGCTACGTGTACGGT
CTGCTCGAGTCTTGCAGCGATGGTATGAAGTGGCGCTGGTTAGTGGCGGT
GAATGCTGGGCCGAATGGGAAGGAAGACTTGAGGATGTGGAAAGGGAGGT
CAAACGGGAGGAAGTGGTGAGGGAGCGGCGAGCGAAGGAGCTGTGAATGA
CCCTCGAAAACGACGCGGTCGCTGGTGCCACCATTGAGCTCCTCGAGACC
CGTCTCCGGCGCCTCACATACCTCTTGACCGGCGATGCAAACTGGACTGG
CAATCCCACGCCGCCCGCAAAGCCCGCATCTCTGGACGACAGCGTCTCGC
GCCGTCTTCTTCGCCTAGAGAGGGACCTGGAAAAGCTGAGCAGAAACATC
CCCGCCGTCCGGGACGTTCTCAGTCTTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005869dynactin complex
Vocabulary: Biological Process
TermDefinition
GO:0061640cytoskeleton-dependent cytokinesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008119KJC3_008119Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008119-T1KJC3_008119-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008119-T1.cdsKJC3_008119-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008119-T1.utr3p1KJC3_008119-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008119-T1.exon2KJC3_008119-T1.exon2Aspergillus niger KJC3exon
KJC3_008119-T1.exon1KJC3_008119-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008119-T1.utr5p1KJC3_008119-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009991
DBxrefPFAM:PF07426
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1023882..1025428 -
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