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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1058271..1059702+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008133-T1 ID=KJC3_008133-T1|Name=KJC3_008133-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1432bp|location=Sequence derived from alignment at ch6:1058271..1059702+ (Aspergillus niger KJC3)
AGAATGGCGATTGAGCAGGCGAGCACTGCAGTTCATTCACTTTAAACCAA
GCAGCATCCCCAACGCCACCCTCTGCTCCAGTTCCATCCTCTTCCTCCAC
CCATCCAGTCGGCGTGACTTTCTCATCTCAATCCTCCAATCCACTCTGTA
TGCATCATTCGCAATTATGAAATTCTTCGAGAATGTCTTCACCTACGACT
ACTCCTTCCCGGCCGTGTCGCTGGCCTACTTCCTTCGCTATCCCAACCCT
TATTCTCGCCATGTGTTGACCACCGATGTCATTGACCGTTACGTCGACCC
GACGACCCAGCGTCTCCACACCACTCGTCTCCTTCTCAAGAAATCCAAGG
TTCCCTCGGGAATCCTCAAACTCCTTCCCAAGGGGATTGGCGGCTCAGAC
AATTCCGGCCAGAGCTATATCCTCGAAACGACTGTCGTCGACGCCAAAGA
GGGTTGGATGCAGACGGAATCTCGTAACATGGAATGGACCGGGATATTGA
GCGTGGTCGAGAGACAATTCTATCAACGCCAGCCCCATGAAGGTCCACTC
GGCACGCTGGAAGGGCTTTCGCTCGATGACAAAAAAAGCGAACAGACTAC
GGTGCGCACCACAGTCACTTTCCGCTCCAAATTCGGGCAAGGAAAATTGC
TAGGTAGAAGGAAGACCGAGCCGAGTAGCGACCACACCGGGGATTATGAA
GAAGAAGCTCCGAAAAGAGGCCTTTTCACCTCCCTGTCCACTGCGGGAAT
CCAACGCACAATTGAGCTGATTGGATTGAACCGCACCCGGGATGCCGTGC
TCAAGAGCAAGCAGGGCATGAATGTGGTTCTCGAGCGCTTGCGTAAAGGC
GGTATTGTGGGTGTTCTTGAAGGGATGCGTCAAGATCGAGAGGCAGCGTT
CGGACCGGAGGGTGGTCCCTGGAAGCGAGTTTGGCTATCCGGCCATGGGC
ATGCGTCTATTCAAGATGACGACAATTGACTTCGAGCTTCTCATCGAACT
GGAGAATAAGGCGACCAACACGGGAAATATATATGCGACATTCAAGCGTG
GAGCTCTGGCGTTTTTGGGGGTTCTCCTTTCTTTTTTGCTTTTGACGGAC
ACTCTCCTACCCTTCTGAACCTTTCTTTTCCTTCCTTTCACGGTCACACT
CTGAAATTTCGGACCACTTTGACACCTGCATATGATCTCACCATGTATAC
AACGAGAAACGTCACGGATCAGAACATTGTGTATATTAGGAAAGGGCGGC
CGGTCGGATACTCTTACTGAATTCGGCTGCACCTCTGTACAATATCGATG
CAATTCACATCTACTTCTTTCACTTGCTTCTATTTATTGTAGTCGCATGT
TCCATGACTACCATAGTGGCTCTTATATGAAAAGCCCTCTTTGGTTTTAC
GCTTCTCTCACTGATACCTCATCTTGACTTCC back to topCoding sequence (CDS) from alignment at ch6:1058271..1059702+ >KJC3_008133-T1 ID=KJC3_008133-T1|Name=KJC3_008133-T1|organism=Aspergillus niger KJC3|type=CDS|length=813bp|location=Sequence derived from alignment at ch6:1058271..1059702+ (Aspergillus niger KJC3)
ATGAAATTCTTCGAGAATGTCTTCACCTACGACTACTCCTTCCCGGCCGT
GTCGCTGGCCTACTTCCTTCGCTATCCCAACCCTTATTCTCGCCATGTGT
TGACCACCGATGTCATTGACCGTTACGTCGACCCGACGACCCAGCGTCTC
CACACCACTCGTCTCCTTCTCAAGAAATCCAAGGTTCCCTCGGGAATCCT
CAAACTCCTTCCCAAGGGGATTGGCGGCTCAGACAATTCCGGCCAGAGCT
ATATCCTCGAAACGACTGTCGTCGACGCCAAAGAGGGTTGGATGCAGACG
GAATCTCGTAACATGGAATGGACCGGGATATTGAGCGTGGTCGAGAGACA
ATTCTATCAACGCCAGCCCCATGAAGGTCCACTCGGCACGCTGGAAGGGC
TTTCGCTCGATGACAAAAAAAGCGAACAGACTACGGTGCGCACCACAGTC
ACTTTCCGCTCCAAATTCGGGCAAGGAAAATTGCTAGGTAGAAGGAAGAC
CGAGCCGAGTAGCGACCACACCGGGGATTATGAAGAAGAAGCTCCGAAAA
GAGGCCTTTTCACCTCCCTGTCCACTGCGGGAATCCAACGCACAATTGAG
CTGATTGGATTGAACCGCACCCGGGATGCCGTGCTCAAGAGCAAGCAGGG
CATGAATGTGGTTCTCGAGCGCTTGCGTAAAGGCGGTATTGTGGGTGTTC
TTGAAGGGATGCGTCAAGATCGAGAGGCAGCGTTCGGACCGGAGGGTGGT
CCCTGGAAGCGAGTTTGGCTATCCGGCCATGGGCATGCGTCTATTCAAGA
TGACGACAATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008133-T1.utr5p1 | KJC3_008133-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008133-T1.utr3p1 | KJC3_008133-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006797 |
| DBxref | PFAM:PF04707 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1058271..1059702 + |
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