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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1092369..1094951+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008144-T1 ID=KJC3_008144-T1|Name=KJC3_008144-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2583bp|location=Sequence derived from alignment at ch6:1092369..1094951+ (Aspergillus niger KJC3)
CCCCGATTGGTCCGTGCACCGCGGCCAAAGCTGTCCTCCGATCCGACTAT
CACCAAGTAGACCATCTATCATCATCAACAATCCACCCCCACAGCAAACG
CAACCCATTCTACTCCCCCGCACGCGCATTCCCGCAATTCTCACACAATG
GCGGATGACGAAGAGCGCATCAAAGCTGAGAAGCTAGCTGCCGCGAAGAA
AAGGGTACGCATCTCATCTCCCCTATGAATGCACACTAGCTACCTACCTA
CCCCGAACTATGTATCTGTTCTCTGCGTGTCTGTTGGAACGATACATTCA
TGCGCAGCGCCAAAATCTAAACATACTAATGCGGTGAATAATAGGTAGCC
CAGCTCCAGAAACAGAAAAAGAAAGCAAATAAGAAGGCCGCCAGCGTTGA
TACCTCCAAAGATACTACCCCCGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGAGCCATCAGAACCGGCCAAGGAAGATGCGCCCGCGACGTCGTCCCCG
GAACCTGCACCTGCACCGGTTACAGAAAAGGAGGGAAGAGAGGAAGGAAG
TAGCGCTGTGCCGGAGGTAGAGGAGACACAGACAGAGACAGAGAAGGCGA
CAGAGCCAGAAACGAAGACAGAAGCTCAAGCCGAAACTACCACATCGGAC
GAGAAAGCGGAGAAGGACGAAGATAAGGAACAAGAACAACCTCAGGTTGA
GAAGAAAGAAGTCGAATCCCCCGCAGAAGAAGAGACCGAGCCCATGCCCG
ACGCACCCACCTCGCCTGGTCCCGAAACCCCCGCACAACCCGCCATGAAG
CCCGAGTCATCCGGAAGACAGTCCACACACGGTCGACAACCCTCTCTATC
CATCCAGTCGAAGATGCGGTCATCATCGTTCCGGAAGGGATCCGTGTCGC
AGGGAAGCAGTGGGTCGCCGTCGCCGGCGGCGAGTGCGATGCTGAAGTCG
CCTTCGTTGCCGCCGCTGAGCGCGGATGGTGAGGCAGTGCAGGAAGTGTA
TCGGAAGCAGTCGACGCGGATTGAGGAGCTGGAGAAGGACAATAAGCGGC
TAGAAAAGGAGCTGGAGGAGGGTAAGGGACGGTGGAAGAAGACGGAGGAG
CAGTTGGAGGATCTCCGGGAAGCCAGTGTGGATGTTGCGGAGTTGAAGGT
GAAGTTGCAGGATGCGGAGGCGAAGGTGGGGGAGATTGAGGAGTTGGTGA
GTTGACCTTTTCACCTTCATACGATCCTGAAAGGGCTCTATCGGGGACTT
CAAGACTAATGGTCTACTGGGTATGTAGAAAGCAGAAATCGCATCCCTCC
AGAGACAAAATTCGCACCTGCAAACCCGCACGCATCGAAGCACCGCGAGC
GTCTCCGTGCCTGGCCCATCGGAGTCTTCGCCGGCGGACCTGATGCAGCA
ATTGGAGTCCAAGTCAGCGACGATCGAAGCGATGGAATTGGAGATTTCGA
ATCTGCGCGCACAGCTTGCATCGAGCAGCGCACATGAGACCCAAATAGCA
GCGCTCGAGGAGAAGCTATCCGGCAGTGAATCTGCGCTCGAGAAGGCCCA
GCGCGAGCTTACTGATACCAAGAGCGCGCTGACCCGCGCCTCAGAAAAGG
CCGTCAAAGAGGGCGTGGACAAGACCTCCACAGAGACGCTAATTAAGAAC
CTCCAGCGGGAGCTCGAAGAGCTCAAACAGGAGAAGACCGCATCGGACAA
GAAAGCCGAGACCCTAGAAAAGAAACTCGAAGCCATGGGCAACCTGCACA
AGGAATCCGAAGCCCGCCACCAAACCCGTCTACGCGAGACCGAGAAGATC
GAAAAAGAAGCCGCGGTCCTCCGCAAGAGACTCGCAGACGTAGAGAACGA
GAACCTCCGCCTCAAAGAAGAACAAGAATCCCTCCGTAAACGACACGCCA
CGGACGGCGGCGCCGGTGCCGACGACGACGCCCTCGACGAACTCGAAGAC
GAAGAACGCTCCCGTCTGCACCGCCGCATCCGCGATCTCGAAGGCGAAGT
CTTCGACCTCCGCCGCGGCGTCTGGAAAGAACGTCGCGAGGAACTCGCCG
CAGATCATGCCCAGCACCTCCACTCCCCGGACGCCTTCCCGCCCACATCC
TCAACATCTGCCTCCGCAGCAGCAGCAGCAAACACCTTCGACGACGTCGA
CCTCATCGGCGGAACTCCCGACCATGCCCGTCGTCGCAGCATGGCTGCCA
ACAACCACAAGTCCCAGCAGCAGCATTCCTCCTTCTCGACCGTCCTGTCC
TCCGGAATTGCCGCTTTCACCGGCGGAAACACCTTCTACGGCAGCGGCGG
CGGCGGCGGTAACCGCGGCCGCGCTTCTTCAAACCAGCAGCACCATCCGC
CCGCAGCACGGGGCAGTCTCGAGCTCCTTTCTGAGGAGAACTTCGATGAT
GAGTTCGATGAGGCAGAGTTTGCGCGCGCGCAGGCTGAAGAGGAGGCACG
GAAGAGGGTGGAATGGGTGCGCGAGATCAAGAGGAAGCTTAAGGATTGGC
ATGGCTGGCGGTTGGATTTAGTGGATAGTAGGGCTGGGGCTGAGGGGGCG
GGTGTGGGGATGGGAGAGATATTCCAGATTTAA back to topCoding sequence (CDS) from alignment at ch6:1092369..1094951+ >KJC3_008144-T1 ID=KJC3_008144-T1|Name=KJC3_008144-T1|organism=Aspergillus niger KJC3|type=CDS|length=6642bp|location=Sequence derived from alignment at ch6:1092369..1094951+ (Aspergillus niger KJC3)
ATGGCGGATGACGAAGAGCGCATCAAAGCTGAGAAGCTAGCTGCCGCGAA
GAAAAGGGTAGCCCAGCTCCAGAAACAGAAAAAGAAAGCAAATAAGAAGG
CCGCCAGCGTTGATACCTCCAAAGATACTACCCCCGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGAGCCATCAGAACCGGCCAAGGAAGATGCGCCCGC
GACGTCGTCCCCGGAACCTGCACCTGCACCGGTTACAGAAAAGGAGGGAA
GAGAGGAAGGAAGTAGCGCTGTGCCGGAGGTAGAGGAGACACAGACAGAG
ACAGAGAAGGCGACAGAGCCAGAAACGAAGACAGAAGCTCAAGCCGAAAC
TACCACATCGGACGAGAAAGCGGAGAAGGACGAAGATAAGGAACAAGAAC
AACCTCAGGTTGAGAAGAAAGAAGTCGAATCCCCCGCAGAAGAAGAGACC
GAGCCCATGCCCGACGCACCCACCTCGCCTGGTCCCGAAACCCCCGCACA
ACCCGCCATGAAGCCCGAGTCATCCGGAAGACAGTCCACACACGGTCGAC
AACCCTCTCTATCCATCCAGTCGAAGATGCGGTCATCATCGTTCCGGAAG
GGATCCGTGTCGCAGGGAAGCAGTGGGTCGCCGTCGCCGGCGGCGAGTGC
GATGCTGAAGTCGCCTTCGTTGCCGCCGCTGAGCGCGGATGGTGAGGCAG
TGCAGGAAGTGTATCGGAAGCAGTCGACGCGGATTGAGGAGCTGGAGAAG
GACAATAAGCGGCTAGAAAAGGAGCTGGAGGAGGGTAAGGGACGGTGGAA
GAAGACGGAGGAGCAGTTGGAGGATCTCCGGGAAGCCAGTGTGGATGTTG
CGGAGTTGAAGGTGAAGTTGCAGGATGCGGAGGCGAAGGTGGGGGAGATT
GAGGAGTTGAAAGCAGAAATCGCATCCCTCCAGAGACAAAATTCGCACCT
GCAAACCCGCACGCATCGAAGCACCGCGAGCGTCTCCGTGCCTGGCCCAT
CGGAGTCTTCGCCGGCGGACCTGATGCAGCAATTGGAGTCCAAGTCAGCG
ACGATCGAAGCGATGGAATTGGAGATTTCGAATCTGCGCGCACAGCTTGC
ATCGAGCAGCGCACATGAGACCCAAATAGCAGCGCTCGAGGAGAAGCTAT
CCGGCAGTGAATCTGCGCTCGAGAAGGCCCAGCGCGAGCTTACTGATACC
AAGAGCGCGCTGACCCGCGCCTCAGAAAAGGCCGTCAAAGAGGGCGTGGA
CAAGACCTCCACAGAGACGCTAATTAAGAACCTCCAGCGGGAGCTCGAAG
AGCTCAAACAGGAGAAGACCGCATCGGACAAGAAAGCCGAGACCCTAGAA
AAGAAACTCGAAGCCATGGGCAACCTGCACAAGGAATCCGAAGCCCGCCA
CCAAACCCGTCTACGCGAGACCGAGAAGATCGAAAAAGAAGCCGCGGTCC
TCCGCAAGAGACTCGCAGACGTAGAGAACGAGAACCTCCGCCTCAAAGAA
GAACAAGAATCCCTCCGTAAACGACACGCCACGGACGGCGGCGCCGGTGC
CGACGACGACGCCCTCGACGAACTCGAAGACGAAGAACGCTCCCGTCTGC
ACCGCCGCATCCGCGATCTCGAAGGCGAAGTCTTCGACCTCCGCCGCGGC
GTCTGGAAAGAACGTCGCGAGGAACTCGCCGCAGATCATGCCCAGCACCT
CCACTCCCCGGACGCCTTCCCGCCCACATCCTCAACATCTGCCTCCGCAG
CAGCAGCAGCAAACACCTTCGACGACGTCGACCTCATCGGCGGAACTCCC
GACCATGCCCGTCGTCGCAGCATGGCTGCCAACAACCACAAGTCCCAGCA
GCAGCATTCCTCCTTCTCGACCGTCCTGTCCTCCGGAATTGCCGCTTTCA
CCGGCGGAAACACCTTCTACGGCAGCGGCGGCGGCGGCGGTAACCGCGGC
CGCGCTTCTTCAAACCAGCAGCACCATCCGCCCGCAGCACGGGGCAGTCT
CGAGCTCCTTTCTGAGGAGAACTTCGATGATGAGTTCGATGAGGCAGAGT
TTGCGCGCGCGCAGGCTGAAGAGGAGGCACGGAAGAGGGTGGAATGGGTG
CGCGAGATCAAGAGGAAGCTTAAGGATTGGCATGGCTGGCGGTTGGATTT
AGTGGATAGTAGGGCTGGGGCTGAGGGGGCGGGTGTGGGGATGGGAGAGA
TATTCCAGATTTAAATGGCGGATGACGAAGAGCGCATCAAAGCTGAGAAG
CTAGCTGCCGCGAAGAAAAGGGTAGCCCAGCTCCAGAAACAGAAAAAGAA
AGCAAATAAGAAGGCCGCCAGCGTTGATACCTCCAAAGATACTACCCCCG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGAGCCATCAGAACCGGCCAAG
GAAGATGCGCCCGCGACGTCGTCCCCGGAACCTGCACCTGCACCGGTTAC
AGAAAAGGAGGGAAGAGAGGAAGGAAGTAGCGCTGTGCCGGAGGTAGAGG
AGACACAGACAGAGACAGAGAAGGCGACAGAGCCAGAAACGAAGACAGAA
GCTCAAGCCGAAACTACCACATCGGACGAGAAAGCGGAGAAGGACGAAGA
TAAGGAACAAGAACAACCTCAGGTTGAGAAGAAAGAAGTCGAATCCCCCG
CAGAAGAAGAGACCGAGCCCATGCCCGACGCACCCACCTCGCCTGGTCCC
GAAACCCCCGCACAACCCGCCATGAAGCCCGAGTCATCCGGAAGACAGTC
CACACACGGTCGACAACCCTCTCTATCCATCCAGTCGAAGATGCGGTCAT
CATCGTTCCGGAAGGGATCCGTGTCGCAGGGAAGCAGTGGGTCGCCGTCG
CCGGCGGCGAGTGCGATGCTGAAGTCGCCTTCGTTGCCGCCGCTGAGCGC
GGATGGTGAGGCAGTGCAGGAAGTGTATCGGAAGCAGTCGACGCGGATTG
AGGAGCTGGAGAAGGACAATAAGCGGCTAGAAAAGGAGCTGGAGGAGGGT
AAGGGACGGTGGAAGAAGACGGAGGAGCAGTTGGAGGATCTCCGGGAAGC
CAGTGTGGATGTTGCGGAGTTGAAGGTGAAGTTGCAGGATGCGGAGGCGA
AGGTGGGGGAGATTGAGGAGTTGAAAGCAGAAATCGCATCCCTCCAGAGA
CAAAATTCGCACCTGCAAACCCGCACGCATCGAAGCACCGCGAGCGTCTC
CGTGCCTGGCCCATCGGAGTCTTCGCCGGCGGACCTGATGCAGCAATTGG
AGTCCAAGTCAGCGACGATCGAAGCGATGGAATTGGAGATTTCGAATCTG
CGCGCACAGCTTGCATCGAGCAGCGCACATGAGACCCAAATAGCAGCGCT
CGAGGAGAAGCTATCCGGCAGTGAATCTGCGCTCGAGAAGGCCCAGCGCG
AGCTTACTGATACCAAGAGCGCGCTGACCCGCGCCTCAGAAAAGGCCGTC
AAAGAGGGCGTGGACAAGACCTCCACAGAGACGCTAATTAAGAACCTCCA
GCGGGAGCTCGAAGAGCTCAAACAGGAGAAGACCGCATCGGACAAGAAAG
CCGAGACCCTAGAAAAGAAACTCGAAGCCATGGGCAACCTGCACAAGGAA
TCCGAAGCCCGCCACCAAACCCGTCTACGCGAGACCGAGAAGATCGAAAA
AGAAGCCGCGGTCCTCCGCAAGAGACTCGCAGACGTAGAGAACGAGAACC
TCCGCCTCAAAGAAGAACAAGAATCCCTCCGTAAACGACACGCCACGGAC
GGCGGCGCCGGTGCCGACGACGACGCCCTCGACGAACTCGAAGACGAAGA
ACGCTCCCGTCTGCACCGCCGCATCCGCGATCTCGAAGGCGAAGTCTTCG
ACCTCCGCCGCGGCGTCTGGAAAGAACGTCGCGAGGAACTCGCCGCAGAT
CATGCCCAGCACCTCCACTCCCCGGACGCCTTCCCGCCCACATCCTCAAC
ATCTGCCTCCGCAGCAGCAGCAGCAAACACCTTCGACGACGTCGACCTCA
TCGGCGGAACTCCCGACCATGCCCGTCGTCGCAGCATGGCTGCCAACAAC
CACAAGTCCCAGCAGCAGCATTCCTCCTTCTCGACCGTCCTGTCCTCCGG
AATTGCCGCTTTCACCGGCGGAAACACCTTCTACGGCAGCGGCGGCGGCG
GCGGTAACCGCGGCCGCGCTTCTTCAAACCAGCAGCACCATCCGCCCGCA
GCACGGGGCAGTCTCGAGCTCCTTTCTGAGGAGAACTTCGATGATGAGTT
CGATGAGGCAGAGTTTGCGCGCGCGCAGGCTGAAGAGGAGGCACGGAAGA
GGGTGGAATGGGTGCGCGAGATCAAGAGGAAGCTTAAGGATTGGCATGGC
TGGCGGTTGGATTTAGTGGATAGTAGGGCTGGGGCTGAGGGGGCGGGTGT
GGGGATGGGAGAGATATTCCAGATTTAAATGGCGGATGACGAAGAGCGCA
TCAAAGCTGAGAAGCTAGCTGCCGCGAAGAAAAGGGTAGCCCAGCTCCAG
AAACAGAAAAAGAAAGCAAATAAGAAGGCCGCCAGCGTTGATACCTCCAA
AGATACTACCCCCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGAGCCAT
CAGAACCGGCCAAGGAAGATGCGCCCGCGACGTCGTCCCCGGAACCTGCA
CCTGCACCGGTTACAGAAAAGGAGGGAAGAGAGGAAGGAAGTAGCGCTGT
GCCGGAGGTAGAGGAGACACAGACAGAGACAGAGAAGGCGACAGAGCCAG
AAACGAAGACAGAAGCTCAAGCCGAAACTACCACATCGGACGAGAAAGCG
GAGAAGGACGAAGATAAGGAACAAGAACAACCTCAGGTTGAGAAGAAAGA
AGTCGAATCCCCCGCAGAAGAAGAGACCGAGCCCATGCCCGACGCACCCA
CCTCGCCTGGTCCCGAAACCCCCGCACAACCCGCCATGAAGCCCGAGTCA
TCCGGAAGACAGTCCACACACGGTCGACAACCCTCTCTATCCATCCAGTC
GAAGATGCGGTCATCATCGTTCCGGAAGGGATCCGTGTCGCAGGGAAGCA
GTGGGTCGCCGTCGCCGGCGGCGAGTGCGATGCTGAAGTCGCCTTCGTTG
CCGCCGCTGAGCGCGGATGGTGAGGCAGTGCAGGAAGTGTATCGGAAGCA
GTCGACGCGGATTGAGGAGCTGGAGAAGGACAATAAGCGGCTAGAAAAGG
AGCTGGAGGAGGGTAAGGGACGGTGGAAGAAGACGGAGGAGCAGTTGGAG
GATCTCCGGGAAGCCAGTGTGGATGTTGCGGAGTTGAAGGTGAAGTTGCA
GGATGCGGAGGCGAAGGTGGGGGAGATTGAGGAGTTGAAAGCAGAAATCG
CATCCCTCCAGAGACAAAATTCGCACCTGCAAACCCGCACGCATCGAAGC
ACCGCGAGCGTCTCCGTGCCTGGCCCATCGGAGTCTTCGCCGGCGGACCT
GATGCAGCAATTGGAGTCCAAGTCAGCGACGATCGAAGCGATGGAATTGG
AGATTTCGAATCTGCGCGCACAGCTTGCATCGAGCAGCGCACATGAGACC
CAAATAGCAGCGCTCGAGGAGAAGCTATCCGGCAGTGAATCTGCGCTCGA
GAAGGCCCAGCGCGAGCTTACTGATACCAAGAGCGCGCTGACCCGCGCCT
CAGAAAAGGCCGTCAAAGAGGGCGTGGACAAGACCTCCACAGAGACGCTA
ATTAAGAACCTCCAGCGGGAGCTCGAAGAGCTCAAACAGGAGAAGACCGC
ATCGGACAAGAAAGCCGAGACCCTAGAAAAGAAACTCGAAGCCATGGGCA
ACCTGCACAAGGAATCCGAAGCCCGCCACCAAACCCGTCTACGCGAGACC
GAGAAGATCGAAAAAGAAGCCGCGGTCCTCCGCAAGAGACTCGCAGACGT
AGAGAACGAGAACCTCCGCCTCAAAGAAGAACAAGAATCCCTCCGTAAAC
GACACGCCACGGACGGCGGCGCCGGTGCCGACGACGACGCCCTCGACGAA
CTCGAAGACGAAGAACGCTCCCGTCTGCACCGCCGCATCCGCGATCTCGA
AGGCGAAGTCTTCGACCTCCGCCGCGGCGTCTGGAAAGAACGTCGCGAGG
AACTCGCCGCAGATCATGCCCAGCACCTCCACTCCCCGGACGCCTTCCCG
CCCACATCCTCAACATCTGCCTCCGCAGCAGCAGCAGCAAACACCTTCGA
CGACGTCGACCTCATCGGCGGAACTCCCGACCATGCCCGTCGTCGCAGCA
TGGCTGCCAACAACCACAAGTCCCAGCAGCAGCATTCCTCCTTCTCGACC
GTCCTGTCCTCCGGAATTGCCGCTTTCACCGGCGGAAACACCTTCTACGG
CAGCGGCGGCGGCGGCGGTAACCGCGGCCGCGCTTCTTCAAACCAGCAGC
ACCATCCGCCCGCAGCACGGGGCAGTCTCGAGCTCCTTTCTGAGGAGAAC
TTCGATGATGAGTTCGATGAGGCAGAGTTTGCGCGCGCGCAGGCTGAAGA
GGAGGCACGGAAGAGGGTGGAATGGGTGCGCGAGATCAAGAGGAAGCTTA
AGGATTGGCATGGCTGGCGGTTGGATTTAGTGGATAGTAGGGCTGGGGCT
GAGGGGGCGGGTGTGGGGATGGGAGAGATATTCCAGATTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008144-T1.utr5p1 | KJC3_008144-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.7 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1092369..1094951 + |
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