You are here

KJC3_008148-T1, KJC3_008148-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008148-T1
Unique NameKJC3_008148-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1105045..1107432+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008148-T1 ID=KJC3_008148-T1|Name=KJC3_008148-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2388bp|location=Sequence derived from alignment at ch6:1105045..1107432+ (Aspergillus niger KJC3)
GTGAGGGCCCGATAAGCTCCCGCGGCTCTCTCTGCATGTGCTTCTCGGAC TTACCAGCCAACCGAGCTACTTGCTTTCTTCTTCCCTGAGTTGGCCTTCT GCCATCAGATATGCACCCTCGCCTCATGCGACTCGCATCATCTTGGATGG GACATCATGGAAGATCACACTACGGACGCCCTCGTCAATCGTGACGAGCC TGTCCCGGTCATCGCCGCTGGGAAGCACAATGACGATGCCGAAAGATCAA AACCTGGGGTATTGAAGAGATCAGTGTCCAAGGCCGGTCGCTCTCTACAA GATAGGATTCTCTCCAAGTAGGCAACTATAAATATCCCCTTCTTATATTA ATGTCGCATGAATCGCCTTGGCTGACTGGGTCCGTTTCAGGATCTTGGAG CAAGTTATGCCCGTCGAAGACGTCGATGCTGAATCAGTGTCAGTCGGCGA CAAGCCAATTCCCATCGACAGTAAACGGCCGGCGTTTAGTCTACCTCTGA TGGCCAACAATTTCCGTCGGTTTAATGCAAGGTGAAAAAACACTCTTCCC AGTATCTGGCTACTTCAAATGCTGATGTATTTGGTAGGATTGGCATTGTT TTTCTGTTTCAAACCCGTGTGGAGCGTCTGCTCAGTTGGAAACAGACCTC TCACACAGTCTCCTTTCTCTTCGTATATTCCTTCATATGCTTAGATCCCC ATCTTCTTGTCATTATTCCGTTCGCCGTACTCTTGTTCTTTGTTATGGTA CCTGCGTTCCTCGCACGCCACCCTCCACCTCCCTCGACGTCCACTTCCAG CATCACCCCCTACTACTCATACGAAGGCCCAGCCCTTGCTCCTGCCAAAA CCATTAAACCAGCGTCGGAGACGTCTAAGGATTTCTTTCGGAATATGAGA GACTTGCAAAACTGCATGGCAGATTATTCCGATGTACATGATGCGACAGT GTCCGCGTTTGCGCCCTTGACAAACTTCTCGAATGAGAAACTATCATCGA CAGTATTTCTTACATGCACGCTCATGGCAGCTCTATTATTCTTAACCGCT CACCTTCTCCCGTGGCGACTGATTTTCCTTGTTGGTGGCAATGCAGCCAT TTTGTCAATGCACCCAAGCTTTCCAGATCTAGTACAGAGTCTTGCAGAGG ATATGTTGGATAACACAGCGGAAGAAGGTCCGGCGGCTGATAAAAAGGGC CAGGAATCTTTCAACCTTGGGGGTCTGGCCATGCCTGCTTCGCCCTCAAA AGCCGTGTCTTTAATGGAATCACTGGCCAATATCTCCTTGGACTCCTCCC CAGAGGAGCGGGAGGTTGAGGTATTCGAGATCCAATACCGCTCCCTTGCT CCTTACTCGGAATCTCAATGGGAACATTTTCTGTTCAGTCCTATGCCATA CGATCCGCTCTCTCCCTCACGCATTGCCGGTGATCGTCCCAAGGGTTGTC GATTCTTCGAGGATGTCCAACCCCCGTCTGGATGGGCGTGGAAAGGCAAG AAGTGGGAATTAGATTTAGACTGTCGCGAGTGGGTTGTGGAGCGCATGAT CACCGGAGTTGGCTTCGAGGTCTCCGGCAGTCCATCGGAAAGTGGCATGA CCAGTGGTGAGATTGGGGGTTGGGTCTGGGACCTGCCTCCAGCCTCCAGC AGATATGAGGAGGCAGTGTCTACGCTAGCATATGATGTCCTAGACTCGAT AAACCCATCAAAAGGACATGATTGGAAAGGCAGAAAGAAAGGGAAAGAAA GGGTCTCCCAAGATTACGAGGAGAAGGTGCACACCGGATCCCATGTAACG GGGGAATGGAGAAGGAGACGATGGATTCGCATCGTGCACCGTGTTAGTTT ACCGGCTGCCGATAAGTACGATCAAGCAGCTGACGACGATACCAACGATA CCTGAGGACATGTACGATTGAAGAACGATACTGGAGATGAGATGTATCCA CCAAATTTGGATGGCATTCAGATCAACATCGTACATGCCCCGAAGAGCAT CAAGCAAGTGGACATGTATAATCCGACCCACGCTAACCAAGTTGCAATCA CAGCAGTCTCGAGGCCCACCCTGATACCGTACGATTACCATGCTTGTGGC AACCAGGCTCCACAGTGTTGATGGATTCGCTTCGGGCACTATCGGACACT TATCAATTGTTTTTCTTTATTTTTTTTTATCACCTTCTTCTACACAGTGC AGGTTATTCATCGGAGACCCAAGGTAGACTTCACCTTGCTAAAATACCAC CTCACTGTTGAAGATAAAACTTGAGTCCCTGTAAAGACTTCTTTCGTAGT AATAGTAGCCATGTGAAACGACCAGATGCTGGCACTTATGTGGGGAAGTG CCGCATCCGGTAAGTACTGCCTAAGGCAGCAGCGTATG
back to top

Coding sequence (CDS) from alignment at ch6:1105045..1107432+

>KJC3_008148-T1 ID=KJC3_008148-T1|Name=KJC3_008148-T1|organism=Aspergillus niger KJC3|type=CDS|length=4860bp|location=Sequence derived from alignment at ch6:1105045..1107432+ (Aspergillus niger KJC3)
ATGGAAGATCACACTACGGACGCCCTCGTCAATCGTGACGAGCCTGTCCC
GGTCATCGCCGCTGGGAAGCACAATGACGATGCCGAAAGATCAAAACCTG
GGGTATTGAAGAGATCAGTGTCCAAGGCCGGTCGCTCTCTACAAGATAGG
ATTCTCTCCAAGATCTTGGAGCAAGTTATGCCCGTCGAAGACGTCGATGC
TGAATCAGTGTCAGTCGGCGACAAGCCAATTCCCATCGACAGTAAACGGC
CGGCGTTTAGTCTACCTCTGATGGCCAACAATTTCCGTCGGTTTAATGCA
AGGATTGGCATTGTTTTTCTGTTTCAAACCCGTGTGGAGCGTCTGCTCAG
TTGGAAACAGACCTCTCACACAGTCTCCTTTCTCTTCGTATATTCCTTCA
TATGCTTAGATCCCCATCTTCTTGTCATTATTCCGTTCGCCGTACTCTTG
TTCTTTGTTATGGTACCTGCGTTCCTCGCACGCCACCCTCCACCTCCCTC
GACGTCCACTTCCAGCATCACCCCCTACTACTCATACGAAGGCCCAGCCC
TTGCTCCTGCCAAAACCATTAAACCAGCGTCGGAGACGTCTAAGGATTTC
TTTCGGAATATGAGAGACTTGCAAAACTGCATGGCAGATTATTCCGATGT
ACATGATGCGACAGTGTCCGCGTTTGCGCCCTTGACAAACTTCTCGAATG
AGAAACTATCATCGACAGTATTTCTTACATGCACGCTCATGGCAGCTCTA
TTATTCTTAACCGCTCACCTTCTCCCGTGGCGACTGATTTTCCTTGTTGG
TGGCAATGCAGCCATTTTGTCAATGCACCCAAGCTTTCCAGATCTAGTAC
AGAGTCTTGCAGAGGATATGTTGGATAACACAGCGGAAGAAGGTCCGGCG
GCTGATAAAAAGGGCCAGGAATCTTTCAACCTTGGGGGTCTGGCCATGCC
TGCTTCGCCCTCAAAAGCCGTGTCTTTAATGGAATCACTGGCCAATATCT
CCTTGGACTCCTCCCCAGAGGAGCGGGAGGTTGAGGTATTCGAGATCCAA
TACCGCTCCCTTGCTCCTTACTCGGAATCTCAATGGGAACATTTTCTGTT
CAGTCCTATGCCATACGATCCGCTCTCTCCCTCACGCATTGCCGGTGATC
GTCCCAAGGGTTGTCGATTCTTCGAGGATGTCCAACCCCCGTCTGGATGG
GCGTGGAAAGGCAAGAAGTGGGAATTAGATTTAGACTGTCGCGAGTGGGT
TGTGGAGCGCATGATCACCGGAGTTGGCTTCGAGGTCTCCGGCAGTCCAT
CGGAAAGTGGCATGACCAGTGGTGAGATTGGGGGTTGGGTCTGGGACCTG
CCTCCAGCCTCCAGCAGATATGAGGAGGCAGTGTCTACGCTAGCATATGA
TGTCCTAGACTCGATAAACCCATCAAAAGGACATGATTGGAAAGGCAGAA
AGAAAGGGAAAGAAAGGGTCTCCCAAGATTACGAGGAGAAGGTGCACACC
GGATCCCATGTAACGGGGGAATGGAGAAGGAGACGATGGATTCGCATCGT
GCACCGTGTTAGTTTACCGGCTGCCGATAAGTACGATCAAGCAGCTGACG
ACGATACCAACGATACCTGAATGGAAGATCACACTACGGACGCCCTCGTC
AATCGTGACGAGCCTGTCCCGGTCATCGCCGCTGGGAAGCACAATGACGA
TGCCGAAAGATCAAAACCTGGGGTATTGAAGAGATCAGTGTCCAAGGCCG
GTCGCTCTCTACAAGATAGGATTCTCTCCAAGATCTTGGAGCAAGTTATG
CCCGTCGAAGACGTCGATGCTGAATCAGTGTCAGTCGGCGACAAGCCAAT
TCCCATCGACAGTAAACGGCCGGCGTTTAGTCTACCTCTGATGGCCAACA
ATTTCCGTCGGTTTAATGCAAGGATTGGCATTGTTTTTCTGTTTCAAACC
CGTGTGGAGCGTCTGCTCAGTTGGAAACAGACCTCTCACACAGTCTCCTT
TCTCTTCGTATATTCCTTCATATGCTTAGATCCCCATCTTCTTGTCATTA
TTCCGTTCGCCGTACTCTTGTTCTTTGTTATGGTACCTGCGTTCCTCGCA
CGCCACCCTCCACCTCCCTCGACGTCCACTTCCAGCATCACCCCCTACTA
CTCATACGAAGGCCCAGCCCTTGCTCCTGCCAAAACCATTAAACCAGCGT
CGGAGACGTCTAAGGATTTCTTTCGGAATATGAGAGACTTGCAAAACTGC
ATGGCAGATTATTCCGATGTACATGATGCGACAGTGTCCGCGTTTGCGCC
CTTGACAAACTTCTCGAATGAGAAACTATCATCGACAGTATTTCTTACAT
GCACGCTCATGGCAGCTCTATTATTCTTAACCGCTCACCTTCTCCCGTGG
CGACTGATTTTCCTTGTTGGTGGCAATGCAGCCATTTTGTCAATGCACCC
AAGCTTTCCAGATCTAGTACAGAGTCTTGCAGAGGATATGTTGGATAACA
CAGCGGAAGAAGGTCCGGCGGCTGATAAAAAGGGCCAGGAATCTTTCAAC
CTTGGGGGTCTGGCCATGCCTGCTTCGCCCTCAAAAGCCGTGTCTTTAAT
GGAATCACTGGCCAATATCTCCTTGGACTCCTCCCCAGAGGAGCGGGAGG
TTGAGGTATTCGAGATCCAATACCGCTCCCTTGCTCCTTACTCGGAATCT
CAATGGGAACATTTTCTGTTCAGTCCTATGCCATACGATCCGCTCTCTCC
CTCACGCATTGCCGGTGATCGTCCCAAGGGTTGTCGATTCTTCGAGGATG
TCCAACCCCCGTCTGGATGGGCGTGGAAAGGCAAGAAGTGGGAATTAGAT
TTAGACTGTCGCGAGTGGGTTGTGGAGCGCATGATCACCGGAGTTGGCTT
CGAGGTCTCCGGCAGTCCATCGGAAAGTGGCATGACCAGTGGTGAGATTG
GGGGTTGGGTCTGGGACCTGCCTCCAGCCTCCAGCAGATATGAGGAGGCA
GTGTCTACGCTAGCATATGATGTCCTAGACTCGATAAACCCATCAAAAGG
ACATGATTGGAAAGGCAGAAAGAAAGGGAAAGAAAGGGTCTCCCAAGATT
ACGAGGAGAAGGTGCACACCGGATCCCATGTAACGGGGGAATGGAGAAGG
AGACGATGGATTCGCATCGTGCACCGTGTTAGTTTACCGGCTGCCGATAA
GTACGATCAAGCAGCTGACGACGATACCAACGATACCTGAATGGAAGATC
ACACTACGGACGCCCTCGTCAATCGTGACGAGCCTGTCCCGGTCATCGCC
GCTGGGAAGCACAATGACGATGCCGAAAGATCAAAACCTGGGGTATTGAA
GAGATCAGTGTCCAAGGCCGGTCGCTCTCTACAAGATAGGATTCTCTCCA
AGATCTTGGAGCAAGTTATGCCCGTCGAAGACGTCGATGCTGAATCAGTG
TCAGTCGGCGACAAGCCAATTCCCATCGACAGTAAACGGCCGGCGTTTAG
TCTACCTCTGATGGCCAACAATTTCCGTCGGTTTAATGCAAGGATTGGCA
TTGTTTTTCTGTTTCAAACCCGTGTGGAGCGTCTGCTCAGTTGGAAACAG
ACCTCTCACACAGTCTCCTTTCTCTTCGTATATTCCTTCATATGCTTAGA
TCCCCATCTTCTTGTCATTATTCCGTTCGCCGTACTCTTGTTCTTTGTTA
TGGTACCTGCGTTCCTCGCACGCCACCCTCCACCTCCCTCGACGTCCACT
TCCAGCATCACCCCCTACTACTCATACGAAGGCCCAGCCCTTGCTCCTGC
CAAAACCATTAAACCAGCGTCGGAGACGTCTAAGGATTTCTTTCGGAATA
TGAGAGACTTGCAAAACTGCATGGCAGATTATTCCGATGTACATGATGCG
ACAGTGTCCGCGTTTGCGCCCTTGACAAACTTCTCGAATGAGAAACTATC
ATCGACAGTATTTCTTACATGCACGCTCATGGCAGCTCTATTATTCTTAA
CCGCTCACCTTCTCCCGTGGCGACTGATTTTCCTTGTTGGTGGCAATGCA
GCCATTTTGTCAATGCACCCAAGCTTTCCAGATCTAGTACAGAGTCTTGC
AGAGGATATGTTGGATAACACAGCGGAAGAAGGTCCGGCGGCTGATAAAA
AGGGCCAGGAATCTTTCAACCTTGGGGGTCTGGCCATGCCTGCTTCGCCC
TCAAAAGCCGTGTCTTTAATGGAATCACTGGCCAATATCTCCTTGGACTC
CTCCCCAGAGGAGCGGGAGGTTGAGGTATTCGAGATCCAATACCGCTCCC
TTGCTCCTTACTCGGAATCTCAATGGGAACATTTTCTGTTCAGTCCTATG
CCATACGATCCGCTCTCTCCCTCACGCATTGCCGGTGATCGTCCCAAGGG
TTGTCGATTCTTCGAGGATGTCCAACCCCCGTCTGGATGGGCGTGGAAAG
GCAAGAAGTGGGAATTAGATTTAGACTGTCGCGAGTGGGTTGTGGAGCGC
ATGATCACCGGAGTTGGCTTCGAGGTCTCCGGCAGTCCATCGGAAAGTGG
CATGACCAGTGGTGAGATTGGGGGTTGGGTCTGGGACCTGCCTCCAGCCT
CCAGCAGATATGAGGAGGCAGTGTCTACGCTAGCATATGATGTCCTAGAC
TCGATAAACCCATCAAAAGGACATGATTGGAAAGGCAGAAAGAAAGGGAA
AGAAAGGGTCTCCCAAGATTACGAGGAGAAGGTGCACACCGGATCCCATG
TAACGGGGGAATGGAGAAGGAGACGATGGATTCGCATCGTGCACCGTGTT
AGTTTACCGGCTGCCGATAAGTACGATCAAGCAGCTGACGACGATACCAA
CGATACCTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008148KJC3_008148Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008148-T1KJC3_008148-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008148-T1.utr5p1KJC3_008148-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008148-T1.exon1KJC3_008148-T1.exon1Aspergillus niger KJC3exon
KJC3_008148-T1.exon2KJC3_008148-T1.exon2Aspergillus niger KJC3exon
KJC3_008148-T1.exon3KJC3_008148-T1.exon3Aspergillus niger KJC3exon
KJC3_008148-T1.exon4KJC3_008148-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008148-T1.cdsKJC3_008148-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008148-T1.utr3p1KJC3_008148-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_008148-T1.utr3p2KJC3_008148-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR010482
DBxrefPFAM:PF06398
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1105045..1107432 +