You are here

Home

KJC3_008213-T1, KJC3_008213-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008213-T1
Unique NameKJC3_008213-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1287480..1288490-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008213-T1 ID=KJC3_008213-T1|Name=KJC3_008213-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1011bp|location=Sequence derived from alignment at ch6:1287480..1288490- (Aspergillus niger KJC3)
ATGAGCATCCGGCGTAGTACGTTGCTATGGCGGAGGATGTAATTACGGTG
CTACCCCATGGAATCGCCCCGACACAGGAATACTATGTATCAGAACAGAA
CACTCAGCTATCATAACCACGGAAGAGATAGTTAAAGCAGTGCGTATTTA
CATTATTGCCGCCACTGCCGTCAAGCCAACGCTCAAGGGAGATAGTAAGT
TAGATATGCCAAATAAGCCTACAGTAAGTTGCCGTCCCGTCTTGCCTCAG
TGATAAAAATAGTTGAGGTTAATCTATATGTTTCGGGGCAAAAATGGAAT
AGAAAGGAGTCAAAGTGAAAATAGAGAGAAAGAAGCCAATAGCATTCACA
GATTTCCTCACGGGAGCCAAGTATCAGATTCTACAGTATGATCTGCGGTC
ATCGGAAGAGAAAGTTTCTACGCCGAGTATAGATGGAACTATCGGCCTAA
AATTGGCCGGCTTACTGAATACTAGTAACAGATACAATGTCTCAATACTA
TCATAGGCCTATACTTAAGTGCAGGGTTGAGCTCCCTGACCACAGTGAGT
ACAATGCCCCAAACAATACACGAACACGGTAGAGACACATATTCTTCTGC
AACTATCCGCAATAATTCCGACCGACATGTCCAGCCTGCGAGCTGACACA
GCCCACCCTGTCATCGGCCAAGATTTGATCAATCACTATTGTGGGTTACA
GAAACGAGGTGTGAAACATCACGAGGACTCCAAAAGCACTATTGAATGTC
TGTGTAGCCTCTGCTTATTCCGCCGCAGAGTTCCGCTTCCCCGGTGTTGC
ACAACATCTTAGTGTTCCACATTGCTCCCGGTACAGGCTGGATGGCGCAG
CCATGGGAGCAACAGGCGGATAGTCACTACGCCTGGGGGAGTGTGCCTCT
ACCACTAACGTTCAAAGTAGCTGGGAAATGCTCATACTATTGCTCAGACT
TGGTAGATCACTGATCAAAACAGGCATGAGGGAGAGAAAGAAAGAAAGAG
TACCTAAATGA
back to top

Coding sequence (CDS) from alignment at ch6:1287480..1288490-

>KJC3_008213-T1 ID=KJC3_008213-T1|Name=KJC3_008213-T1|organism=Aspergillus niger KJC3|type=CDS|length=1875bp|location=Sequence derived from alignment at ch6:1287480..1288490- (Aspergillus niger KJC3)
GCATGAGGGAGAGAAAGAAAGAAAGAGTACCTAAATGACCTCTGCTTATT
CCGCCGCAGAGTTCCGCTTCCCCGGTGTTGCACAACATCTTAGTGTTCCA
CATTGCTCCCGGTACAGGCTGGATGGCGCAGCCATGGGAGCAACAGGCGG
ATAGTCACTACGCCTGGGGGAATACAATGTCTCAATACTATCATAGGCCT
ATACTTAAGTGCAGGGTTGAGCTCCCTGACCACAAACACTCAGCTATCAT
AACCACGGAAGAGATAGTTAAAGCAGTGCGTATTTACATTATTGCCGCCA
CTGCCGTCAAGCCAACGCTCAAGGGAGATAGTAAGTTAGATATGCCAAAT
AAGCCTACAATGAGCATCCGGCGTAGCATGAGGGAGAGAAAGAAAGAAAG
AGTACCTAAATGACCTCTGCTTATTCCGCCGCAGAGTTCCGCTTCCCCGG
TGTTGCACAACATCTTAGTGTTCCACATTGCTCCCGGTACAGGCTGGATG
GCGCAGCCATGGGAGCAACAGGCGGATAGTCACTACGCCTGGGGGAATAC
AATGTCTCAATACTATCATAGGCCTATACTTAAGTGCAGGGTTGAGCTCC
CTGACCACAAACACTCAGCTATCATAACCACGGAAGAGATAGTTAAAGCA
GTGCGTATTTACATTATTGCCGCCACTGCCGTCAAGCCAACGCTCAAGGG
AGATAGTAAGTTAGATATGCCAAATAAGCCTACAATGAGCATCCGGCGTA
GCATGAGGGAGAGAAAGAAAGAAAGAGTACCTAAATGACCTCTGCTTATT
CCGCCGCAGAGTTCCGCTTCCCCGGTGTTGCACAACATCTTAGTGTTCCA
CATTGCTCCCGGTACAGGCTGGATGGCGCAGCCATGGGAGCAACAGGCGG
ATAGTCACTACGCCTGGGGGAATACAATGTCTCAATACTATCATAGGCCT
ATACTTAAGTGCAGGGTTGAGCTCCCTGACCACAAACACTCAGCTATCAT
AACCACGGAAGAGATAGTTAAAGCAGTGCGTATTTACATTATTGCCGCCA
CTGCCGTCAAGCCAACGCTCAAGGGAGATAGTAAGTTAGATATGCCAAAT
AAGCCTACAATGAGCATCCGGCGTAGCATGAGGGAGAGAAAGAAAGAAAG
AGTACCTAAATGACCTCTGCTTATTCCGCCGCAGAGTTCCGCTTCCCCGG
TGTTGCACAACATCTTAGTGTTCCACATTGCTCCCGGTACAGGCTGGATG
GCGCAGCCATGGGAGCAACAGGCGGATAGTCACTACGCCTGGGGGAATAC
AATGTCTCAATACTATCATAGGCCTATACTTAAGTGCAGGGTTGAGCTCC
CTGACCACAAACACTCAGCTATCATAACCACGGAAGAGATAGTTAAAGCA
GTGCGTATTTACATTATTGCCGCCACTGCCGTCAAGCCAACGCTCAAGGG
AGATAGTAAGTTAGATATGCCAAATAAGCCTACAATGAGCATCCGGCGTA
GCATGAGGGAGAGAAAGAAAGAAAGAGTACCTAAATGACCTCTGCTTATT
CCGCCGCAGAGTTCCGCTTCCCCGGTGTTGCACAACATCTTAGTGTTCCA
CATTGCTCCCGGTACAGGCTGGATGGCGCAGCCATGGGAGCAACAGGCGG
ATAGTCACTACGCCTGGGGGAATACAATGTCTCAATACTATCATAGGCCT
ATACTTAAGTGCAGGGTTGAGCTCCCTGACCACAAACACTCAGCTATCAT
AACCACGGAAGAGATAGTTAAAGCAGTGCGTATTTACATTATTGCCGCCA
CTGCCGTCAAGCCAACGCTCAAGGGAGATAGTAAGTTAGATATGCCAAAT
AAGCCTACAATGAGCATCCGGCGTA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008213KJC3_008213Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008213-T1KJC3_008213-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008213-T1.cdsKJC3_008213-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008213-T1.exon5KJC3_008213-T1.exon5Aspergillus niger KJC3exon
KJC3_008213-T1.exon4KJC3_008213-T1.exon4Aspergillus niger KJC3exon
KJC3_008213-T1.exon3KJC3_008213-T1.exon3Aspergillus niger KJC3exon
KJC3_008213-T1.exon2KJC3_008213-T1.exon2Aspergillus niger KJC3exon
KJC3_008213-T1.exon1KJC3_008213-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_6.10
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1287480..1288490 -
Powered by Drupal