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KJC3_008216-T1, KJC3_008216-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008216-T1
Unique NameKJC3_008216-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1295989..1298110+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008216-T1 ID=KJC3_008216-T1|Name=KJC3_008216-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2122bp|location=Sequence derived from alignment at ch6:1295989..1298110+ (Aspergillus niger KJC3)
AGCAACCTGAGACACCTTGACTAACAGTTATTCTACCCCCCTACCATGCA
CAGGATGTATTGTCCCATTTTCGGTCAACGGCCGAGAACGCTTCCGAACC
GTCGGAATTACAGTGCCACTCAAACTATGGAAATAGACTCCGGCACCCCG
ACCGAGGCAGCTTCCGTTGTGCACAACCGTGCATTCAAATCTGAGCACAG
AGACAACGCACATACCCTGTAGCACCATGAAGGATCATACAGCCTCCTCG
GAGCCGAGCCAGCAGGGTCAATATGCCGAGTGACATCACGGACACGAGAA
TGGCGCCGCTACTCCGTACCCCAAGCTGACTTCGCTACCAAACTGTCAGG
CTAACCTCGGGGTATTCCCGTCTCATATAGAGCAAGTGGTCGCAGGGGCA
CGATGATGGCACAGACAGTCATCTCCACAGTCGATGCAGTCGGTTGAAGG
ATCATCCCCACGGCCAGCCATCGGCCGTAGCTTATCTGGCAATCCGGCTC
TCTCACTGGCCGATCAATTCGAGTCGACAGAAAGATTTTGCAAATAATTT
CTAGAAGCCTTCTTTATCTCGGCTAAACGACCCACAATTCTGCGGCGCCC
CCGAGTTTGCCGACCGACCATCACCATTTCTTCGTCCCGTTCCATCCCGA
TCGCGCCTCCAAGCCCTAGACCGGGGCCTCCCGATCACAAAAACGTCCCC
TTGACCACGCGATCAATTGCATGCAATGTTTTCTTATCTTTTCTGACATG
CTGCAGCCACAAACCACTTATCTTGATAGCAGCAGCAGCAGCAGTCATCG
CACCCAATCACCCAAACGAACCATGGTGGTCACTTATCTCCCCGAATATG
AAAGCGATGAAACACACCCCCAGCACCATGGGCTCGAGCCCGCCATCCCG
CCCTTCGCGGGCCGCATGGGCGGAAACCAGGATTTCGTGGTTGACAGGAC
GGACCCTAAGAACTCAAAGGTGTTAGAGAGGGTGCCCGACGCAGCACCGT
GCATGACACTAAAAGAGATATTCGATTTACGGGGGTTCCTGAGCGTGGAT
CTATGGAAGTTCGCAGTGCTAGAATGCATAGGTAATTTCCCCGCCTTCTC
CGAAACCCTAAACAATGCCATGAATGGTTCCCGAGCTAATAAGTATATAA
CCAACAGCAAGCATGATGAATGTCTTCATCACCTGCTGGGTAACAACCCA
CCCACTATCCGCAACAACATCCCCCAAAGGCCAAGCCGGCGTCTACGGAA
CAGTCACCTTCTTCTCCCCAACCTTCGGCGGCCTCACCAACCTCCTACTC
ACACCGCTGCTCATCTACACCTTCTCCCCTTCCAGTGGCGGCCATATCAG
CCCCACCATCACCCTCGCCACCTTCTTCGCGCGCATCATTACTTTCCCGC
GCATGATCCTCTACCTCGCGGGCCAAACGCTAGGAGGCGCACTCGCCGGC
TTTGCCATGCACTCCGCGTACGGCACGCGTGAATTCACCGTGGGAGGATG
CCATATCGACACGACCATGGTGTCCGCAGAAGATGGACTGGTCATTGAGT
TCTTTGCGTGCCTGATTTTGATTTTCTTGGCGTTCGGTGTCGCGTTGGAC
CCTAGACAGGCGAAGGTGTTTGGACATGCTGTTTCGCCGTGGTTGGTGGG
TGTTGTATTGGGAATTGTTACGTGGGGAACGGCGTTTACGAGGGAGGGGT
ATATTGGTGCTAGTGAGTATTCTAGTTTCTCTATTGAAGTGAATGAGAAG
ATGACTAACGAAGTGTTAGGCGTTAATCCTGCGAGGTGTTTCGGTGCTTA
TGTGGCGAGTGATTTTCCCACATATCATTGGATTCATTGGGTGAGTTTCG
TGTCTGGTTCTTCTGCTTGATGTCGAATATGATACTAATAATCACAGGTT
GGTCCCCTGGCTGCGGCGGTAGCGCATGGGTTAGTTTATTTTGTTGATCC
GCTCTGGAAGGATCCTCGCGCGGAGTAAATATTTTCTTAAAAGTCATGGA
AACGGAGTGTCGGATTGTAAATAGAAGTGATGGATTTGTACAAAACATAT
TATAGACCTGTGAATACTACCAAGAAGTTCTTCGGAACGTCTGTCATGTT
GAAGTGACAGTTGCGATGACCC
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Coding sequence (CDS) from alignment at ch6:1295989..1298110+

>KJC3_008216-T1 ID=KJC3_008216-T1|Name=KJC3_008216-T1|organism=Aspergillus niger KJC3|type=CDS|length=4272bp|location=Sequence derived from alignment at ch6:1295989..1298110+ (Aspergillus niger KJC3)
ATGCAATGTTTTCTTATCTTTTCTGACATGCTGCAGCCACAAACCACTTA
TCTTGATAGCAGCAGCAGCAGCAGTCATCGCACCCAATCACCCAAACGAA
CCATGGTGGTCACTTATCTCCCCGAATATGAAAGCGATGAAACACACCCC
CAGCACCATGGGCTCGAGCCCGCCATCCCGCCCTTCGCGGGCCGCATGGG
CGGAAACCAGGATTTCGTGGTTGACAGGACGGACCCTAAGAACTCAAAGG
TGTTAGAGAGGGTGCCCGACGCAGCACCGTGCATGACACTAAAAGAGATA
TTCGATTTACGGGGGTTCCTGAGCGTGGATCTATGGAAGTTCGCAGTGCT
AGAATGCATAGCAAGCATGATGAATGTCTTCATCACCTGCTGGGTAACAA
CCCACCCACTATCCGCAACAACATCCCCCAAAGGCCAAGCCGGCGTCTAC
GGAACAGTCACCTTCTTCTCCCCAACCTTCGGCGGCCTCACCAACCTCCT
ACTCACACCGCTGCTCATCTACACCTTCTCCCCTTCCAGTGGCGGCCATA
TCAGCCCCACCATCACCCTCGCCACCTTCTTCGCGCGCATCATTACTTTC
CCGCGCATGATCCTCTACCTCGCGGGCCAAACGCTAGGAGGCGCACTCGC
CGGCTTTGCCATGCACTCCGCGTACGGCACGCGTGAATTCACCGTGGGAG
GATGCCATATCGACACGACCATGGTGTCCGCAGAAGATGGACTGGTCATT
GAGTTCTTTGCGTGCCTGATTTTGATTTTCTTGGCGTTCGGTGTCGCGTT
GGACCCTAGACAGGCGAAGGTGTTTGGACATGCTGTTTCGCCGTGGTTGG
TGGGTGTTGTATTGGGAATTGTTACGTGGGGAACGGCGTTTACGAGGGAG
GGGTATATTGGTGCTAGCGTTAATCCTGCGAGGTGTTTCGGTGCTTATGT
GGCGAGTGATTTTCCCACATATCATTGGATTCATTGGGTTGGTCCCCTGG
CTGCGGCGGTAGCGCATGGGTTAGTTTATTTTGTTGATCCGCTCTGGAAG
GATCCTCGCGCGGAGTAAATGCAATGTTTTCTTATCTTTTCTGACATGCT
GCAGCCACAAACCACTTATCTTGATAGCAGCAGCAGCAGCAGTCATCGCA
CCCAATCACCCAAACGAACCATGGTGGTCACTTATCTCCCCGAATATGAA
AGCGATGAAACACACCCCCAGCACCATGGGCTCGAGCCCGCCATCCCGCC
CTTCGCGGGCCGCATGGGCGGAAACCAGGATTTCGTGGTTGACAGGACGG
ACCCTAAGAACTCAAAGGTGTTAGAGAGGGTGCCCGACGCAGCACCGTGC
ATGACACTAAAAGAGATATTCGATTTACGGGGGTTCCTGAGCGTGGATCT
ATGGAAGTTCGCAGTGCTAGAATGCATAGCAAGCATGATGAATGTCTTCA
TCACCTGCTGGGTAACAACCCACCCACTATCCGCAACAACATCCCCCAAA
GGCCAAGCCGGCGTCTACGGAACAGTCACCTTCTTCTCCCCAACCTTCGG
CGGCCTCACCAACCTCCTACTCACACCGCTGCTCATCTACACCTTCTCCC
CTTCCAGTGGCGGCCATATCAGCCCCACCATCACCCTCGCCACCTTCTTC
GCGCGCATCATTACTTTCCCGCGCATGATCCTCTACCTCGCGGGCCAAAC
GCTAGGAGGCGCACTCGCCGGCTTTGCCATGCACTCCGCGTACGGCACGC
GTGAATTCACCGTGGGAGGATGCCATATCGACACGACCATGGTGTCCGCA
GAAGATGGACTGGTCATTGAGTTCTTTGCGTGCCTGATTTTGATTTTCTT
GGCGTTCGGTGTCGCGTTGGACCCTAGACAGGCGAAGGTGTTTGGACATG
CTGTTTCGCCGTGGTTGGTGGGTGTTGTATTGGGAATTGTTACGTGGGGA
ACGGCGTTTACGAGGGAGGGGTATATTGGTGCTAGCGTTAATCCTGCGAG
GTGTTTCGGTGCTTATGTGGCGAGTGATTTTCCCACATATCATTGGATTC
ATTGGGTTGGTCCCCTGGCTGCGGCGGTAGCGCATGGGTTAGTTTATTTT
GTTGATCCGCTCTGGAAGGATCCTCGCGCGGAGTAAATGCAATGTTTTCT
TATCTTTTCTGACATGCTGCAGCCACAAACCACTTATCTTGATAGCAGCA
GCAGCAGCAGTCATCGCACCCAATCACCCAAACGAACCATGGTGGTCACT
TATCTCCCCGAATATGAAAGCGATGAAACACACCCCCAGCACCATGGGCT
CGAGCCCGCCATCCCGCCCTTCGCGGGCCGCATGGGCGGAAACCAGGATT
TCGTGGTTGACAGGACGGACCCTAAGAACTCAAAGGTGTTAGAGAGGGTG
CCCGACGCAGCACCGTGCATGACACTAAAAGAGATATTCGATTTACGGGG
GTTCCTGAGCGTGGATCTATGGAAGTTCGCAGTGCTAGAATGCATAGCAA
GCATGATGAATGTCTTCATCACCTGCTGGGTAACAACCCACCCACTATCC
GCAACAACATCCCCCAAAGGCCAAGCCGGCGTCTACGGAACAGTCACCTT
CTTCTCCCCAACCTTCGGCGGCCTCACCAACCTCCTACTCACACCGCTGC
TCATCTACACCTTCTCCCCTTCCAGTGGCGGCCATATCAGCCCCACCATC
ACCCTCGCCACCTTCTTCGCGCGCATCATTACTTTCCCGCGCATGATCCT
CTACCTCGCGGGCCAAACGCTAGGAGGCGCACTCGCCGGCTTTGCCATGC
ACTCCGCGTACGGCACGCGTGAATTCACCGTGGGAGGATGCCATATCGAC
ACGACCATGGTGTCCGCAGAAGATGGACTGGTCATTGAGTTCTTTGCGTG
CCTGATTTTGATTTTCTTGGCGTTCGGTGTCGCGTTGGACCCTAGACAGG
CGAAGGTGTTTGGACATGCTGTTTCGCCGTGGTTGGTGGGTGTTGTATTG
GGAATTGTTACGTGGGGAACGGCGTTTACGAGGGAGGGGTATATTGGTGC
TAGCGTTAATCCTGCGAGGTGTTTCGGTGCTTATGTGGCGAGTGATTTTC
CCACATATCATTGGATTCATTGGGTTGGTCCCCTGGCTGCGGCGGTAGCG
CATGGGTTAGTTTATTTTGTTGATCCGCTCTGGAAGGATCCTCGCGCGGA
GTAAATGCAATGTTTTCTTATCTTTTCTGACATGCTGCAGCCACAAACCA
CTTATCTTGATAGCAGCAGCAGCAGCAGTCATCGCACCCAATCACCCAAA
CGAACCATGGTGGTCACTTATCTCCCCGAATATGAAAGCGATGAAACACA
CCCCCAGCACCATGGGCTCGAGCCCGCCATCCCGCCCTTCGCGGGCCGCA
TGGGCGGAAACCAGGATTTCGTGGTTGACAGGACGGACCCTAAGAACTCA
AAGGTGTTAGAGAGGGTGCCCGACGCAGCACCGTGCATGACACTAAAAGA
GATATTCGATTTACGGGGGTTCCTGAGCGTGGATCTATGGAAGTTCGCAG
TGCTAGAATGCATAGCAAGCATGATGAATGTCTTCATCACCTGCTGGGTA
ACAACCCACCCACTATCCGCAACAACATCCCCCAAAGGCCAAGCCGGCGT
CTACGGAACAGTCACCTTCTTCTCCCCAACCTTCGGCGGCCTCACCAACC
TCCTACTCACACCGCTGCTCATCTACACCTTCTCCCCTTCCAGTGGCGGC
CATATCAGCCCCACCATCACCCTCGCCACCTTCTTCGCGCGCATCATTAC
TTTCCCGCGCATGATCCTCTACCTCGCGGGCCAAACGCTAGGAGGCGCAC
TCGCCGGCTTTGCCATGCACTCCGCGTACGGCACGCGTGAATTCACCGTG
GGAGGATGCCATATCGACACGACCATGGTGTCCGCAGAAGATGGACTGGT
CATTGAGTTCTTTGCGTGCCTGATTTTGATTTTCTTGGCGTTCGGTGTCG
CGTTGGACCCTAGACAGGCGAAGGTGTTTGGACATGCTGTTTCGCCGTGG
TTGGTGGGTGTTGTATTGGGAATTGTTACGTGGGGAACGGCGTTTACGAG
GGAGGGGTATATTGGTGCTAGCGTTAATCCTGCGAGGTGTTTCGGTGCTT
ATGTGGCGAGTGATTTTCCCACATATCATTGGATTCATTGGGTTGGTCCC
CTGGCTGCGGCGGTAGCGCATGGGTTAGTTTATTTTGTTGATCCGCTCTG
GAAGGATCCTCGCGCGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015267channel activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008216KJC3_008216Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008216-T1KJC3_008216-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008216-T1.utr5p1KJC3_008216-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008216-T1.exon1KJC3_008216-T1.exon1Aspergillus niger KJC3exon
KJC3_008216-T1.exon2KJC3_008216-T1.exon2Aspergillus niger KJC3exon
KJC3_008216-T1.exon3KJC3_008216-T1.exon3Aspergillus niger KJC3exon
KJC3_008216-T1.exon4KJC3_008216-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008216-T1.cdsKJC3_008216-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008216-T1.utr3p1KJC3_008216-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023271
DBxrefInterPro:IPR000425
DBxrefPFAM:PF00230
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1295989..1298110 +
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