You are here

Home

KJC3_008242-T1, KJC3_008242-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008242-T1
Unique NameKJC3_008242-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1367375..1368945+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008242-T1 ID=KJC3_008242-T1|Name=KJC3_008242-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1571bp|location=Sequence derived from alignment at ch6:1367375..1368945+ (Aspergillus niger KJC3)
CCAAAGATAGCACACAACAGAGAGTGGGTGGGTATTACTTTGGACTTATT
CCTATTCTTCTGCTTATGAATGTTTACACTGTATGCCCAAAAGGCTTTTG
AAATTTCAACAGCCTAGCCAGGAACACGTCTTGCCCCCACCAGACTGAAA
TAAACTTGCTGGGGAGAGCCCTCGGCAACCAATGGCCTTCATGGAGCAAA
GCGATAACGAAAACGAGACAATTATTTGACGGGCTCCGTGTCATTTAAAG
ACGCGTATACTATCATAGGCAAGATGAGAATAGTGCTGGGTCTAAAAATG
GAGTCTATCGAGTTTGATGACATAAATTAATCATATATTCTTGAAAGTAT
GCCAGGTTGAGCAGAAAGGCTGTCAATCAACGAAAGAACTGGACAAGCAA
TCATTAGTCCATCGCATAGCAGCCCTTTCAGCAAGGCTCTTGGAAGCTGC
CTTGAGAGCACCTGCTTTATCTATAAAAGGGTTCTCCATGCCCAATGTCT
TCTTCATACGAGCTTTATCGCTACACCCCGTCCTTGGGGGCTGCAATCCT
CTTCTTAGTATTGTTCATATTCATAACAGCATACCATGTCTATCAAATGG
CCCAGGCGCGAGCCTGGTATTTTACCTGCTTTGTGCTGGGCGGAATTTGT
TCGTGAAGCCACCTGCTGAATTCCCGGCTTATGCTGACTTAGTTTATAGT
CCAGATAATCGGATACATTACACGTGCGTTAGCGCATAGCAACACCCAAA
GCGTAACCATATACGCTATACAAGATATCCTGATTCTACTCGCGCCACCC
CTCTACGCTGCGACAATCTACATGACCCTTGGGCGGCTTATTACTTTCCT
CGACGCAGAAAGGCAGAGCCTTATCCCAATCAGGTGGCTTACAACAATCT
TCGTTACCGGCGATGTACTATCTTTTCTTCTGCAGGGAGCTGGTATGATA
TACGCCTGATGAATATGCCTCTATTATACTAATATAGTGCTAGGCGGCGG
CATCATGGCCAGTGGCACTCTCAGCGGAATGACCACCGGTGAGAACGTTG
TTATGGGCGGACTAGCTGTCCAGCTCATCTTCTTCAGTGTCTTTGTGATT
GTTGCGACGCTTTTCCACTTTCGTATCCATCAGAACCCTACAGAAAAGTC
GTTGTCTACGTGCATTGCGCGTAGTGGTTGGCGCAACCCAAATTGGGAGA
CGACCATAGTAGGTTTATATATCGCCAGTATGCTTATCTTGATACGGTCG
GTCTTTCGCATGATTGAGTATGCTGGTGGGAATGATGGGTATCTTATGAG
TCATGAGGCTTTTAGCTATGTCTTTGATGCGGTGTTGATGTTTTTTGCGA
TGGTTGTGATTAGCGTGCTTCATCCGTCTAAGGTTCTGGGTTCGGGCAAA
GCGGGGGAGATGAATAAGAGGGAGAGTGTGCAGTTGCAGAGGTTATATTC
TAGGTGAAATATCCACTAAATATACAAGTACGGAATTTAGGTATTCAGGG
CTCCTTCGTTTTGTTTGCTCACGCATCTATTGTGATCTGCACTTGTTGTT
GAGAATACTAGAACGGCTGGC
back to top

Coding sequence (CDS) from alignment at ch6:1367375..1368945+

>KJC3_008242-T1 ID=KJC3_008242-T1|Name=KJC3_008242-T1|organism=Aspergillus niger KJC3|type=CDS|length=2583bp|location=Sequence derived from alignment at ch6:1367375..1368945+ (Aspergillus niger KJC3)
ATGTCTTCTTCATACGAGCTTTATCGCTACACCCCGTCCTTGGGGGCTGC
AATCCTCTTCTTAGTATTGTTCATATTCATAACAGCATACCATGTCTATC
AAATGGCCCAGGCGCGAGCCTGGTATTTTACCTGCTTTGTGCTGGGCGGA
ATTTTCCAGATAATCGGATACATTACACGTGCGTTAGCGCATAGCAACAC
CCAAAGCGTAACCATATACGCTATACAAGATATCCTGATTCTACTCGCGC
CACCCCTCTACGCTGCGACAATCTACATGACCCTTGGGCGGCTTATTACT
TTCCTCGACGCAGAAAGGCAGAGCCTTATCCCAATCAGGTGGCTTACAAC
AATCTTCGTTACCGGCGATGTACTATCTTTTCTTCTGCAGGGAGCTGGCG
GCGGCATCATGGCCAGTGGCACTCTCAGCGGAATGACCACCGGTGAGAAC
GTTGTTATGGGCGGACTAGCTGTCCAGCTCATCTTCTTCAGTGTCTTTGT
GATTGTTGCGACGCTTTTCCACTTTCGTATCCATCAGAACCCTACAGAAA
AGTCGTTGTCTACGTGCATTGCGCGTAGTGGTTGGCGCAACCCAAATTGG
GAGACGACCATAGTAGGTTTATATATCGCCAGTATGCTTATCTTGATACG
GTCGGTCTTTCGCATGATTGAGTATGCTGGTGGGAATGATGGGTATCTTA
TGAGTCATGAGGCTTTTAGCTATGTCTTTGATGCGGTGTTGATGTTTTTT
GCGATGGTTGTGATTAGCGTGCTTCATCCGTCTAAGGTTCTGGGTTCGGG
CAAAGCGGGGGAGATGAATAAGAGGGAGAGTGTGCAGTTGCAGAGGTTAT
ATTCTAGGTGAATGTCTTCTTCATACGAGCTTTATCGCTACACCCCGTCC
TTGGGGGCTGCAATCCTCTTCTTAGTATTGTTCATATTCATAACAGCATA
CCATGTCTATCAAATGGCCCAGGCGCGAGCCTGGTATTTTACCTGCTTTG
TGCTGGGCGGAATTTTCCAGATAATCGGATACATTACACGTGCGTTAGCG
CATAGCAACACCCAAAGCGTAACCATATACGCTATACAAGATATCCTGAT
TCTACTCGCGCCACCCCTCTACGCTGCGACAATCTACATGACCCTTGGGC
GGCTTATTACTTTCCTCGACGCAGAAAGGCAGAGCCTTATCCCAATCAGG
TGGCTTACAACAATCTTCGTTACCGGCGATGTACTATCTTTTCTTCTGCA
GGGAGCTGGCGGCGGCATCATGGCCAGTGGCACTCTCAGCGGAATGACCA
CCGGTGAGAACGTTGTTATGGGCGGACTAGCTGTCCAGCTCATCTTCTTC
AGTGTCTTTGTGATTGTTGCGACGCTTTTCCACTTTCGTATCCATCAGAA
CCCTACAGAAAAGTCGTTGTCTACGTGCATTGCGCGTAGTGGTTGGCGCA
ACCCAAATTGGGAGACGACCATAGTAGGTTTATATATCGCCAGTATGCTT
ATCTTGATACGGTCGGTCTTTCGCATGATTGAGTATGCTGGTGGGAATGA
TGGGTATCTTATGAGTCATGAGGCTTTTAGCTATGTCTTTGATGCGGTGT
TGATGTTTTTTGCGATGGTTGTGATTAGCGTGCTTCATCCGTCTAAGGTT
CTGGGTTCGGGCAAAGCGGGGGAGATGAATAAGAGGGAGAGTGTGCAGTT
GCAGAGGTTATATTCTAGGTGAATGTCTTCTTCATACGAGCTTTATCGCT
ACACCCCGTCCTTGGGGGCTGCAATCCTCTTCTTAGTATTGTTCATATTC
ATAACAGCATACCATGTCTATCAAATGGCCCAGGCGCGAGCCTGGTATTT
TACCTGCTTTGTGCTGGGCGGAATTTTCCAGATAATCGGATACATTACAC
GTGCGTTAGCGCATAGCAACACCCAAAGCGTAACCATATACGCTATACAA
GATATCCTGATTCTACTCGCGCCACCCCTCTACGCTGCGACAATCTACAT
GACCCTTGGGCGGCTTATTACTTTCCTCGACGCAGAAAGGCAGAGCCTTA
TCCCAATCAGGTGGCTTACAACAATCTTCGTTACCGGCGATGTACTATCT
TTTCTTCTGCAGGGAGCTGGCGGCGGCATCATGGCCAGTGGCACTCTCAG
CGGAATGACCACCGGTGAGAACGTTGTTATGGGCGGACTAGCTGTCCAGC
TCATCTTCTTCAGTGTCTTTGTGATTGTTGCGACGCTTTTCCACTTTCGT
ATCCATCAGAACCCTACAGAAAAGTCGTTGTCTACGTGCATTGCGCGTAG
TGGTTGGCGCAACCCAAATTGGGAGACGACCATAGTAGGTTTATATATCG
CCAGTATGCTTATCTTGATACGGTCGGTCTTTCGCATGATTGAGTATGCT
GGTGGGAATGATGGGTATCTTATGAGTCATGAGGCTTTTAGCTATGTCTT
TGATGCGGTGTTGATGTTTTTTGCGATGGTTGTGATTAGCGTGCTTCATC
CGTCTAAGGTTCTGGGTTCGGGCAAAGCGGGGGAGATGAATAAGAGGGAG
AGTGTGCAGTTGCAGAGGTTATATTCTAGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008242KJC3_008242Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008242-T1KJC3_008242-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008242-T1.utr5p1KJC3_008242-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008242-T1.exon1KJC3_008242-T1.exon1Aspergillus niger KJC3exon
KJC3_008242-T1.exon2KJC3_008242-T1.exon2Aspergillus niger KJC3exon
KJC3_008242-T1.exon3KJC3_008242-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008242-T1.cdsKJC3_008242-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008242-T1.utr3p1KJC3_008242-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.11
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1367375..1368945 +
Powered by Drupal