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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1523912..1525805- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008294-T1 ID=KJC3_008294-T1|Name=KJC3_008294-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1894bp|location=Sequence derived from alignment at ch6:1523912..1525805- (Aspergillus niger KJC3)
ATGAACACCTACAAAGACACCTTCCACCTCCCCCACATCAAGGGTCAACC
CCTGCACGTTCTAATCGTCGGCGCCGGCATCGCAGGCCTCTCGGCCGCCC
TGGCGATACACAAGACCGGCCACAAAGTCACCATTCTCGAGCGGGTGCGG
GAAATCGCCGAGGTCGGGGCAGGCATCCAGATGGCGCCGAATGCAGCGCG
GATTCTCGGTCGCTTGGGTTTGCTGGAAAAGGTCATGGAGAAGGCGAATG
CGCTAGAGATGAATTCTCTCCGCAGGTATAAGAACGATGAGGAATTGGGG
AAGGCGGAGTTGATGCCTTCCGTATGTTATGCCTTACCTTGCGTCATTGC
GGGGGTTCTGTGGAAGCTAATGTGGTGTAGGTCGGAGAAAAGTATCACGC
TCCCCTTGCAGTCATCCATCGTGGCGACTTACAAAGTATCCTGCTTGAGG
CGGTACGGTCGGAAAATATCCCCATTCGAACTGATTCGCGAGTCGTCTGT
GCGGCGCCCGATTTCTCTGCGCGCGTGCAACTTCATACCGGGGAATGGGT
ATCCGGGGATGTTGTCATCGGGGCGGATGGGATCAAGTCCGATCTGCGAC
ACCAGATGGCGGCGCATCATGGAGTGAAGGATATTTGTCAGCCGACCGGG
GATGCGGCGTACCGGATCCAGATCCCTGAGGACAAGATGAAAGGGGATCC
GCGGGCGCGGGAACTATTGAAGAAGAATGTTGGGATGCGGTGGATGGGAC
CGGAAGGCCATATTATGGCGTACCCGATGAAGAACAATACCGTGTATAAT
ATGGTGTTGCTGCATCCGCAGAAAGAAGGCGCGGAGACGGAGGAAAGCTG
GACGAATAAGGGAGATAAGCGGGAGATGGAGGAATTTTATTCCGATTGGA
ATGGACTCGTTCGCGATTTATTGAGTTATGTTCCTGACGGGGAGGTGATG
GAGTGGACGCTGAATTCGCATTTCCCGCTGCCGACGTGGATTGAGAATCG
CGTGGTTTTGATGGGCGATGCGTGCCATCCTATGCTGCCGTATGTGGCGC
AGGGAGCGGCGCAGGCGATCGAGGATGCTGGGGTGCTCGGGTGTGTGTTG
GCTTTGACGGACGATATCGATAGCGCATTGGCGGTTTATGAGCGGGTACG
AAAGGAACGCGCCGAACGGATCCAGAAGAGCGCAGCGGTTACGCGGAAAG
CGCTGCATTTGCCCGATGGCGAGGAACAGCGCAAGCGCGATGAGGCTATT
CGCGGCCCTGGGAAGAATCCGGATCTTTGGGCGGATAAATCCTGGCAGGA
TTTCATGTGGGGTGAGTTTGTGCCATTCTGATTTATGCGGCGGTCTTGAA
GGTGCGATACTGACGGTGGTTATGTTACTGTAGGTACGGATGTCATGAAG
GAGACGGTCGATAACTTCGACGATTTAGTTGCTCGCAGTCACGGATACCA
CCCACATGCGTTGAATGCGGTGGCTTATTAGGGTGCTTGATTTTGTGATA
TATCCGACCGAGCAACCTGTCATTCATTGTTGTTGATAATGTGAGATCCG
GCGACTCCGTGGAATTGTACATCCAACAACACAATTATACACCTAGTAAA
GAATCAAACGAGCTTGTCGGCATCTAGACCGGGCGATCAGCCAGCCAACC
AGCCCGGGGTTTAGCATCCATCCTAAGCACCTTGGTGCCCCGAAGGTCCA
ACCATTCATCCAGCTGATTGCGCCTCCCGCGGTGATGCCGGCCAGAGTGA
CACGTCAAGGCAGCCACCAAGCATAACACTGCTACACGGCGAGAAATTGA
GATTCGCAGGTTGAATGGATTCGAATTCCGAAAAAAGCCCGTCTGGTGGA
GGAAGAAGGTGACTAAGTAAGGGGTAAATTCAGCTTAATCTACT back to topCoding sequence (CDS) from alignment at ch6:1523912..1525805- >KJC3_008294-T1 ID=KJC3_008294-T1|Name=KJC3_008294-T1|organism=Aspergillus niger KJC3|type=CDS|length=4050bp|location=Sequence derived from alignment at ch6:1523912..1525805- (Aspergillus niger KJC3)
GTACGGATGTCATGAAGGAGACGGTCGATAACTTCGACGATTTAGTTGCT
CGCAGTCACGGATACCACCCACATGCGTTGAATGCGGTGGCTTATTAGGT
CGGAGAAAAGTATCACGCTCCCCTTGCAGTCATCCATCGTGGCGACTTAC
AAAGTATCCTGCTTGAGGCGGTACGGTCGGAAAATATCCCCATTCGAACT
GATTCGCGAGTCGTCTGTGCGGCGCCCGATTTCTCTGCGCGCGTGCAACT
TCATACCGGGGAATGGGTATCCGGGGATGTTGTCATCGGGGCGGATGGGA
TCAAGTCCGATCTGCGACACCAGATGGCGGCGCATCATGGAGTGAAGGAT
ATTTGTCAGCCGACCGGGGATGCGGCGTACCGGATCCAGATCCCTGAGGA
CAAGATGAAAGGGGATCCGCGGGCGCGGGAACTATTGAAGAAGAATGTTG
GGATGCGGTGGATGGGACCGGAAGGCCATATTATGGCGTACCCGATGAAG
AACAATACCGTGTATAATATGGTGTTGCTGCATCCGCAGAAAGAAGGCGC
GGAGACGGAGGAAAGCTGGACGAATAAGGGAGATAAGCGGGAGATGGAGG
AATTTTATTCCGATTGGAATGGACTCGTTCGCGATTTATTGAGTTATGTT
CCTGACGGGGAGGTGATGGAGTGGACGCTGAATTCGCATTTCCCGCTGCC
GACGTGGATTGAGAATCGCGTGGTTTTGATGGGCGATGCGTGCCATCCTA
TGCTGCCGTATGTGGCGCAGGGAGCGGCGCAGGCGATCGAGGATGCTGGG
GTGCTCGGGTGTGTGTTGGCTTTGACGGACGATATCGATAGCGCATTGGC
GGTTTATGAGCGGGTACGAAAGGAACGCGCCGAACGGATCCAGAAGAGCG
CAGCGGTTACGCGGAAAGCGCTGCATTTGCCCGATGGCGAGGAACAGCGC
AAGCGCGATGAGGCTATTCGCGGCCCTGGGAAGAATCCGGATCTTTGGGC
GGATAAATCCTGGCAGGATTTCATGTGGGATGAACACCTACAAAGACACC
TTCCACCTCCCCCACATCAAGGGTCAACCCCTGCACGTTCTAATCGTCGG
CGCCGGCATCGCAGGCCTCTCGGCCGCCCTGGCGATACACAAGACCGGCC
ACAAAGTCACCATTCTCGAGCGGGTGCGGGAAATCGCCGAGGTCGGGGCA
GGCATCCAGATGGCGCCGAATGCAGCGCGGATTCTCGGTCGCTTGGGTTT
GCTGGAAAAGGTCATGGAGAAGGCGAATGCGCTAGAGATGAATTCTCTCC
GCAGGTATAAGAACGATGAGGAATTGGGGAAGGCGGAGTTGATGCCTTCC
GTACGGATGTCATGAAGGAGACGGTCGATAACTTCGACGATTTAGTTGCT
CGCAGTCACGGATACCACCCACATGCGTTGAATGCGGTGGCTTATTAGGT
CGGAGAAAAGTATCACGCTCCCCTTGCAGTCATCCATCGTGGCGACTTAC
AAAGTATCCTGCTTGAGGCGGTACGGTCGGAAAATATCCCCATTCGAACT
GATTCGCGAGTCGTCTGTGCGGCGCCCGATTTCTCTGCGCGCGTGCAACT
TCATACCGGGGAATGGGTATCCGGGGATGTTGTCATCGGGGCGGATGGGA
TCAAGTCCGATCTGCGACACCAGATGGCGGCGCATCATGGAGTGAAGGAT
ATTTGTCAGCCGACCGGGGATGCGGCGTACCGGATCCAGATCCCTGAGGA
CAAGATGAAAGGGGATCCGCGGGCGCGGGAACTATTGAAGAAGAATGTTG
GGATGCGGTGGATGGGACCGGAAGGCCATATTATGGCGTACCCGATGAAG
AACAATACCGTGTATAATATGGTGTTGCTGCATCCGCAGAAAGAAGGCGC
GGAGACGGAGGAAAGCTGGACGAATAAGGGAGATAAGCGGGAGATGGAGG
AATTTTATTCCGATTGGAATGGACTCGTTCGCGATTTATTGAGTTATGTT
CCTGACGGGGAGGTGATGGAGTGGACGCTGAATTCGCATTTCCCGCTGCC
GACGTGGATTGAGAATCGCGTGGTTTTGATGGGCGATGCGTGCCATCCTA
TGCTGCCGTATGTGGCGCAGGGAGCGGCGCAGGCGATCGAGGATGCTGGG
GTGCTCGGGTGTGTGTTGGCTTTGACGGACGATATCGATAGCGCATTGGC
GGTTTATGAGCGGGTACGAAAGGAACGCGCCGAACGGATCCAGAAGAGCG
CAGCGGTTACGCGGAAAGCGCTGCATTTGCCCGATGGCGAGGAACAGCGC
AAGCGCGATGAGGCTATTCGCGGCCCTGGGAAGAATCCGGATCTTTGGGC
GGATAAATCCTGGCAGGATTTCATGTGGGATGAACACCTACAAAGACACC
TTCCACCTCCCCCACATCAAGGGTCAACCCCTGCACGTTCTAATCGTCGG
CGCCGGCATCGCAGGCCTCTCGGCCGCCCTGGCGATACACAAGACCGGCC
ACAAAGTCACCATTCTCGAGCGGGTGCGGGAAATCGCCGAGGTCGGGGCA
GGCATCCAGATGGCGCCGAATGCAGCGCGGATTCTCGGTCGCTTGGGTTT
GCTGGAAAAGGTCATGGAGAAGGCGAATGCGCTAGAGATGAATTCTCTCC
GCAGGTATAAGAACGATGAGGAATTGGGGAAGGCGGAGTTGATGCCTTCC
GTACGGATGTCATGAAGGAGACGGTCGATAACTTCGACGATTTAGTTGCT
CGCAGTCACGGATACCACCCACATGCGTTGAATGCGGTGGCTTATTAGGT
CGGAGAAAAGTATCACGCTCCCCTTGCAGTCATCCATCGTGGCGACTTAC
AAAGTATCCTGCTTGAGGCGGTACGGTCGGAAAATATCCCCATTCGAACT
GATTCGCGAGTCGTCTGTGCGGCGCCCGATTTCTCTGCGCGCGTGCAACT
TCATACCGGGGAATGGGTATCCGGGGATGTTGTCATCGGGGCGGATGGGA
TCAAGTCCGATCTGCGACACCAGATGGCGGCGCATCATGGAGTGAAGGAT
ATTTGTCAGCCGACCGGGGATGCGGCGTACCGGATCCAGATCCCTGAGGA
CAAGATGAAAGGGGATCCGCGGGCGCGGGAACTATTGAAGAAGAATGTTG
GGATGCGGTGGATGGGACCGGAAGGCCATATTATGGCGTACCCGATGAAG
AACAATACCGTGTATAATATGGTGTTGCTGCATCCGCAGAAAGAAGGCGC
GGAGACGGAGGAAAGCTGGACGAATAAGGGAGATAAGCGGGAGATGGAGG
AATTTTATTCCGATTGGAATGGACTCGTTCGCGATTTATTGAGTTATGTT
CCTGACGGGGAGGTGATGGAGTGGACGCTGAATTCGCATTTCCCGCTGCC
GACGTGGATTGAGAATCGCGTGGTTTTGATGGGCGATGCGTGCCATCCTA
TGCTGCCGTATGTGGCGCAGGGAGCGGCGCAGGCGATCGAGGATGCTGGG
GTGCTCGGGTGTGTGTTGGCTTTGACGGACGATATCGATAGCGCATTGGC
GGTTTATGAGCGGGTACGAAAGGAACGCGCCGAACGGATCCAGAAGAGCG
CAGCGGTTACGCGGAAAGCGCTGCATTTGCCCGATGGCGAGGAACAGCGC
AAGCGCGATGAGGCTATTCGCGGCCCTGGGAAGAATCCGGATCTTTGGGC
GGATAAATCCTGGCAGGATTTCATGTGGGATGAACACCTACAAAGACACC
TTCCACCTCCCCCACATCAAGGGTCAACCCCTGCACGTTCTAATCGTCGG
CGCCGGCATCGCAGGCCTCTCGGCCGCCCTGGCGATACACAAGACCGGCC
ACAAAGTCACCATTCTCGAGCGGGTGCGGGAAATCGCCGAGGTCGGGGCA
GGCATCCAGATGGCGCCGAATGCAGCGCGGATTCTCGGTCGCTTGGGTTT
GCTGGAAAAGGTCATGGAGAAGGCGAATGCGCTAGAGATGAATTCTCTCC
GCAGGTATAAGAACGATGAGGAATTGGGGAAGGCGGAGTTGATGCCTTCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008294-T1.utr3p1 | KJC3_008294-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002938 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1523912..1525805 - |
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