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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1530049..1531171- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008297-T1 ID=KJC3_008297-T1|Name=KJC3_008297-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1123bp|location=Sequence derived from alignment at ch6:1530049..1531171- (Aspergillus niger KJC3)
TTAGAATAGCTTTCCATCATGTCATTCATCCCTCCTGTCGTCCACGAATG
GACTCAAACTGCCCTGGCCAATCTGCCTCCTCCAGTACAGCAGGCATTGC
TGCACCCGCTGGTTCCTAAAGCTCTCGCTGCCATCCTAGCTTTCACTGCA
CTGCGCCAAACCAACCGCGCCTTCAACTCGCTATCCCTTAGCAACTTCAG
CACCCGGAAATGGGACAACGCCCGCGAACTCGTCCTCCTCACGGGCGGAT
GCAGCGGCATCGGTAAACAAATCATGACAGAACTATCCAGCCACGGCGCG
AAAGTCATCATTCTCGACATTAATGAACCCTCCTTTAAGCTCCGTACGTC
CCCCTCCCTATGTAAAACTTCTCAGCTACTAACACAAAATAGCACCCAAC
GTCCACTTCTACAAAGCAGACATCACCTCCTCCGCCGCGCTGCACCCAGT
CGCCGAACAAATCCGGCGCGAACATGGCCACCCCACAGTCCTGGTGAACA
ACGCGGGCGTTGCCAACGACGGGACAATCCTCGACGAAACCGAGGCGAAA
ATCAGATTAACGTTCGAAGTTAACGCGATATCGCACTTTCTCATGGTGAA
GGAGTTCCTCCCCGCTATGATTGAGCGCAATCATGGCCATGTAGTGACAG
TGGCTAGTTTGGCTAGCTTCATGTCTCTCGGGGAAATTGTGGATTATAGT
TGTTCGAAGGCAAGTGCGTTGGCGTTTCATGAGGGGTTGGGGCAGGAGTT
GAAGTATTGGTATAAGGCTACGGGGGTGAAGACTAGGTGAGTTTCCTTCA
GCTCCCTTTTGATGCAGGGAAGAGTGCTAATAGTGTATAGTGTGGTCCAC
CCACTTTGGGTCCGCACACCCATGATCCAGCAGCTTACGGATGCCGGGAA
GCAATTCAAACAGCCCGTTTTGACGGTGGAGAGGGTGGGGAATACGATTG
CGAAGCAGATTCTGTCTGGAAGGAGTGGACAGATTATTCTGCCTGAATCA
TTGTGGTGGATTAGTTTGGTGCGGGCGTGGCCGACGTGGTTGCAGGAGAC
GGCGAGGGGGTTGGCATCGAAGGATTTGGTCAAGTTGAGGGCGTGGCAGA
AGGAGAACGATGTTTGTAAATAG back to topCoding sequence (CDS) from alignment at ch6:1530049..1531171- >KJC3_008297-T1 ID=KJC3_008297-T1|Name=KJC3_008297-T1|organism=Aspergillus niger KJC3|type=CDS|length=3006bp|location=Sequence derived from alignment at ch6:1530049..1531171- (Aspergillus niger KJC3)
TGTGGTCCACCCACTTTGGGTCCGCACACCCATGATCCAGCAGCTTACGG
ATGCCGGGAAGCAATTCAAACAGCCCGTTTTGACGGTGGAGAGGGTGGGG
AATACGATTGCGAAGCAGATTCTGTCTGGAAGGAGTGGACAGATTATTCT
GCCTGAATCATTGTGGTGGATTAGTTTGGTGCGGGCGTGGCCGACGTGGT
TGCAGGAGACGGCGAGGGGGTTGGCATCGAAGGATTTGGTCAAGTTGAGG
GCGTGGCAGAAGGAGAACGATGTTTGTAAATAGCACCCAACGTCCACTTC
TACAAAGCAGACATCACCTCCTCCGCCGCGCTGCACCCAGTCGCCGAACA
AATCCGGCGCGAACATGGCCACCCCACAGTCCTGGTGAACAACGCGGGCG
TTGCCAACGACGGGACAATCCTCGACGAAACCGAGGCGAAAATCAGATTA
ACGTTCGAAGTTAACGCGATATCGCACTTTCTCATGGTGAAGGAGTTCCT
CCCCGCTATGATTGAGCGCAATCATGGCCATGTAGTGACAGTGGCTAGTT
TGGCTAGCTTCATGTCTCTCGGGGAAATTGTGGATTATAGTTGTTCGAAG
GCAAGTGCGTTGGCGTTTCATGAGGGGTTGGGGCAGGAGTTGAAGTATTG
GTATAAGGCTACGGGGGTGAAGACTAGATGTCATTCATCCCTCCTGTCGT
CCACGAATGGACTCAAACTGCCCTGGCCAATCTGCCTCCTCCAGTACAGC
AGGCATTGCTGCACCCGCTGGTTCCTAAAGCTCTCGCTGCCATCCTAGCT
TTCACTGCACTGCGCCAAACCAACCGCGCCTTCAACTCGCTATCCCTTAG
CAACTTCAGCACCCGGAAATGGGACAACGCCCGCGAACTCGTCCTCCTCA
CGGGCGGATGCAGCGGCATCGGTAAACAAATCATGACAGAACTATCCAGC
CACGGCGCGAAAGTCATCATTCTCGACATTAATGAACCCTCCTTTAAGCT
CCTGTGGTCCACCCACTTTGGGTCCGCACACCCATGATCCAGCAGCTTAC
GGATGCCGGGAAGCAATTCAAACAGCCCGTTTTGACGGTGGAGAGGGTGG
GGAATACGATTGCGAAGCAGATTCTGTCTGGAAGGAGTGGACAGATTATT
CTGCCTGAATCATTGTGGTGGATTAGTTTGGTGCGGGCGTGGCCGACGTG
GTTGCAGGAGACGGCGAGGGGGTTGGCATCGAAGGATTTGGTCAAGTTGA
GGGCGTGGCAGAAGGAGAACGATGTTTGTAAATAGCACCCAACGTCCACT
TCTACAAAGCAGACATCACCTCCTCCGCCGCGCTGCACCCAGTCGCCGAA
CAAATCCGGCGCGAACATGGCCACCCCACAGTCCTGGTGAACAACGCGGG
CGTTGCCAACGACGGGACAATCCTCGACGAAACCGAGGCGAAAATCAGAT
TAACGTTCGAAGTTAACGCGATATCGCACTTTCTCATGGTGAAGGAGTTC
CTCCCCGCTATGATTGAGCGCAATCATGGCCATGTAGTGACAGTGGCTAG
TTTGGCTAGCTTCATGTCTCTCGGGGAAATTGTGGATTATAGTTGTTCGA
AGGCAAGTGCGTTGGCGTTTCATGAGGGGTTGGGGCAGGAGTTGAAGTAT
TGGTATAAGGCTACGGGGGTGAAGACTAGATGTCATTCATCCCTCCTGTC
GTCCACGAATGGACTCAAACTGCCCTGGCCAATCTGCCTCCTCCAGTACA
GCAGGCATTGCTGCACCCGCTGGTTCCTAAAGCTCTCGCTGCCATCCTAG
CTTTCACTGCACTGCGCCAAACCAACCGCGCCTTCAACTCGCTATCCCTT
AGCAACTTCAGCACCCGGAAATGGGACAACGCCCGCGAACTCGTCCTCCT
CACGGGCGGATGCAGCGGCATCGGTAAACAAATCATGACAGAACTATCCA
GCCACGGCGCGAAAGTCATCATTCTCGACATTAATGAACCCTCCTTTAAG
CTCCTGTGGTCCACCCACTTTGGGTCCGCACACCCATGATCCAGCAGCTT
ACGGATGCCGGGAAGCAATTCAAACAGCCCGTTTTGACGGTGGAGAGGGT
GGGGAATACGATTGCGAAGCAGATTCTGTCTGGAAGGAGTGGACAGATTA
TTCTGCCTGAATCATTGTGGTGGATTAGTTTGGTGCGGGCGTGGCCGACG
TGGTTGCAGGAGACGGCGAGGGGGTTGGCATCGAAGGATTTGGTCAAGTT
GAGGGCGTGGCAGAAGGAGAACGATGTTTGTAAATAGCACCCAACGTCCA
CTTCTACAAAGCAGACATCACCTCCTCCGCCGCGCTGCACCCAGTCGCCG
AACAAATCCGGCGCGAACATGGCCACCCCACAGTCCTGGTGAACAACGCG
GGCGTTGCCAACGACGGGACAATCCTCGACGAAACCGAGGCGAAAATCAG
ATTAACGTTCGAAGTTAACGCGATATCGCACTTTCTCATGGTGAAGGAGT
TCCTCCCCGCTATGATTGAGCGCAATCATGGCCATGTAGTGACAGTGGCT
AGTTTGGCTAGCTTCATGTCTCTCGGGGAAATTGTGGATTATAGTTGTTC
GAAGGCAAGTGCGTTGGCGTTTCATGAGGGGTTGGGGCAGGAGTTGAAGT
ATTGGTATAAGGCTACGGGGGTGAAGACTAGATGTCATTCATCCCTCCTG
TCGTCCACGAATGGACTCAAACTGCCCTGGCCAATCTGCCTCCTCCAGTA
CAGCAGGCATTGCTGCACCCGCTGGTTCCTAAAGCTCTCGCTGCCATCCT
AGCTTTCACTGCACTGCGCCAAACCAACCGCGCCTTCAACTCGCTATCCC
TTAGCAACTTCAGCACCCGGAAATGGGACAACGCCCGCGAACTCGTCCTC
CTCACGGGCGGATGCAGCGGCATCGGTAAACAAATCATGACAGAACTATC
CAGCCACGGCGCGAAAGTCATCATTCTCGACATTAATGAACCCTCCTTTA
AGCTCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008297-T1.utr5p1 | KJC3_008297-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1530049..1531171 - |
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