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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1544891..1546586+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008303-T1 ID=KJC3_008303-T1|Name=KJC3_008303-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1696bp|location=Sequence derived from alignment at ch6:1544891..1546586+ (Aspergillus niger KJC3)
CCTCAGCACTTCCTCGCCTCAACTTAGATCGCGTTGCTTTCTTTCCCTTG
TCTTTTCTGCATGCGGGTTTTATTTCCTGGAGTTTCCGTCCTGAAACTCA
CCTCCTCCGCAACATGTACACTCTGCCCGTCTTGATTGCGGCTTTATTTT
TACATGTCAAGTTCCCCTTGCTTCCGGGTCTGAGAGACACCCTCTATGGC
ATCATTGTCCTCAGCGCCTGCAGCGCCATTTTCTACCCGCCGGATACCAG
GGACTTTATCAGATATACCAACGCATTTCTGTCTACTTCCTTTGTCATCC
GCGCTGTGGAACTTCTCCTGGTCCAAGATCTGAGTCACTTAAAGCGCCTA
CAAAGAGTGTCTTACCTATCCTCTTCACCCGTATATACATGGGAGCCCAT
ATCTCCCACGCTAGGCTGGAAGCGCTTTGTCCAGGTCTGCGATCTGATCA
TCAATCCACGCGCCGTGGGTTGGAGCTACGGCTCTCCCAAGTACCAGCCT
CCCGTCCGGAAGCTCGAGGCTGCCTCAGCCCCGGATGGCGCAAATGGCTG
CGTTCCTAAACGTGAGGACATCGTCCTGGTAGCGGGTGATGACCGCTTCA
CGTTCCTGATAGGCAAGCTCTGTCGAGCTCTCGTAGCCTATTTCATCATC
GACTCGTACCAGACAGCGATTGGGCGGAACTACTCCAGCGTCAGCAACTT
CGTAGAGACATTCCTGACAAATGTGCTGGGCATCCAAGCATCCCCGGCCA
AAACTGAGGGCGTGATCCGGTTGTTCGTCCTCCCACCAGTACACTGGATG
GCCTCATACGCCTTCGTAGACGGAATCCACGCCGCTACCGGCGTATTTTC
CGTCGGAGTGCTGCGGATCATCTCTCCGCAGCTCGCAGCGGAACCGTGGA
TGTATCCTCCTGTCTTCGGGGCAATCCGATACATGTTCACCTTTAGCCTA
CGAGGCAAGTCACCTAACCCCCCTTCTTACTCGTCCAAGGGCAACAGTCT
AACAAAAGAAAAATCCAGACATCTGGGGCAAAATGTGGCACGATCTCTGC
CGTCGGCCATTCCTGGCCCTTTCCCTCTCCCTTGTACCAGAAGCATGCCC
CTTAGGCCTCAAACGGCTCCTCATCGTCTGCCTCTCCTTCATGGTATCTG
GCATCGTCCACGCAGCAGGGACCTACGCCGTCTCGAAGGACTGGTACGCC
GCGTTCATGATGATGTTCTTCTTCTGCGTCCTGCCAACCTGTGTGGTCGT
GCAGCAAATCATCTCCGATCAGATCTTGCCGCGTGTCCTTCCCGCGAAAA
GTACTATCTCTCGGGTTGTTATTTGGCTCGTAAATGCGGCATTCGTGGCA
GCGTGGGGCTATTATACTAGTCCGTGGTTTTTGAATTACAGTAAGCTCCC
GGAGGCGATTGAGTCGATTCCGATGCCGGTTAGTTTTTGGGGGGTGGTGC
TTGGGGTTTAGGTTTGGTTCGATATTGGCGGCGGTTGGTATATATAGATC
GTGTTCTTACAAAGGAGGGGGAAGGGGTGTGATGTTGTGTGAGGTTGTTA
AACGGTTCCTAGTTTGTTTGTTTTGGCATAGCGTTATGATACCATCTTAT
ACATTTGCGTCTTTATAGGTATTGGATTGGATACTGATAGGGTTTCGGTT
GTTAGCTAGGAGTTGAATACCATACATAGATTGTGTTCAGCTGGTA back to topCoding sequence (CDS) from alignment at ch6:1544891..1546586+ >KJC3_008303-T1 ID=KJC3_008303-T1|Name=KJC3_008303-T1|organism=Aspergillus niger KJC3|type=CDS|length=2568bp|location=Sequence derived from alignment at ch6:1544891..1546586+ (Aspergillus niger KJC3)
ATGTACACTCTGCCCGTCTTGATTGCGGCTTTATTTTTACATGTCAAGTT
CCCCTTGCTTCCGGGTCTGAGAGACACCCTCTATGGCATCATTGTCCTCA
GCGCCTGCAGCGCCATTTTCTACCCGCCGGATACCAGGGACTTTATCAGA
TATACCAACGCATTTCTGTCTACTTCCTTTGTCATCCGCGCTGTGGAACT
TCTCCTGGTCCAAGATCTGAGTCACTTAAAGCGCCTACAAAGAGTGTCTT
ACCTATCCTCTTCACCCGTATATACATGGGAGCCCATATCTCCCACGCTA
GGCTGGAAGCGCTTTGTCCAGGTCTGCGATCTGATCATCAATCCACGCGC
CGTGGGTTGGAGCTACGGCTCTCCCAAGTACCAGCCTCCCGTCCGGAAGC
TCGAGGCTGCCTCAGCCCCGGATGGCGCAAATGGCTGCGTTCCTAAACGT
GAGGACATCGTCCTGGTAGCGGGTGATGACCGCTTCACGTTCCTGATAGG
CAAGCTCTGTCGAGCTCTCGTAGCCTATTTCATCATCGACTCGTACCAGA
CAGCGATTGGGCGGAACTACTCCAGCGTCAGCAACTTCGTAGAGACATTC
CTGACAAATGTGCTGGGCATCCAAGCATCCCCGGCCAAAACTGAGGGCGT
GATCCGGTTGTTCGTCCTCCCACCAGTACACTGGATGGCCTCATACGCCT
TCGTAGACGGAATCCACGCCGCTACCGGCGTATTTTCCGTCGGAGTGCTG
CGGATCATCTCTCCGCAGCTCGCAGCGGAACCGTGGATGTATCCTCCTGT
CTTCGGGGCAATCCGATACATGTTCACCTTTAGCCTACGAGACATCTGGG
GCAAAATGTGGCACGATCTCTGCCGTCGGCCATTCCTGGCCCTTTCCCTC
TCCCTTGTACCAGAAGCATGCCCCTTAGGCCTCAAACGGCTCCTCATCGT
CTGCCTCTCCTTCATGGTATCTGGCATCGTCCACGCAGCAGGGACCTACG
CCGTCTCGAAGGACTGGTACGCCGCGTTCATGATGATGTTCTTCTTCTGC
GTCCTGCCAACCTGTGTGGTCGTGCAGCAAATCATCTCCGATCAGATCTT
GCCGCGTGTCCTTCCCGCGAAAAGTACTATCTCTCGGGTTGTTATTTGGC
TCGTAAATGCGGCATTCGTGGCAGCGTGGGGCTATTATACTAGTCCGTGG
TTTTTGAATTACAGTAAGCTCCCGGAGGCGATTGAGTCGATTCCGATGCC
GGTTAGTTTTTGGGGGGTGGTGCTTGGGGTTTAGATGTACACTCTGCCCG
TCTTGATTGCGGCTTTATTTTTACATGTCAAGTTCCCCTTGCTTCCGGGT
CTGAGAGACACCCTCTATGGCATCATTGTCCTCAGCGCCTGCAGCGCCAT
TTTCTACCCGCCGGATACCAGGGACTTTATCAGATATACCAACGCATTTC
TGTCTACTTCCTTTGTCATCCGCGCTGTGGAACTTCTCCTGGTCCAAGAT
CTGAGTCACTTAAAGCGCCTACAAAGAGTGTCTTACCTATCCTCTTCACC
CGTATATACATGGGAGCCCATATCTCCCACGCTAGGCTGGAAGCGCTTTG
TCCAGGTCTGCGATCTGATCATCAATCCACGCGCCGTGGGTTGGAGCTAC
GGCTCTCCCAAGTACCAGCCTCCCGTCCGGAAGCTCGAGGCTGCCTCAGC
CCCGGATGGCGCAAATGGCTGCGTTCCTAAACGTGAGGACATCGTCCTGG
TAGCGGGTGATGACCGCTTCACGTTCCTGATAGGCAAGCTCTGTCGAGCT
CTCGTAGCCTATTTCATCATCGACTCGTACCAGACAGCGATTGGGCGGAA
CTACTCCAGCGTCAGCAACTTCGTAGAGACATTCCTGACAAATGTGCTGG
GCATCCAAGCATCCCCGGCCAAAACTGAGGGCGTGATCCGGTTGTTCGTC
CTCCCACCAGTACACTGGATGGCCTCATACGCCTTCGTAGACGGAATCCA
CGCCGCTACCGGCGTATTTTCCGTCGGAGTGCTGCGGATCATCTCTCCGC
AGCTCGCAGCGGAACCGTGGATGTATCCTCCTGTCTTCGGGGCAATCCGA
TACATGTTCACCTTTAGCCTACGAGACATCTGGGGCAAAATGTGGCACGA
TCTCTGCCGTCGGCCATTCCTGGCCCTTTCCCTCTCCCTTGTACCAGAAG
CATGCCCCTTAGGCCTCAAACGGCTCCTCATCGTCTGCCTCTCCTTCATG
GTATCTGGCATCGTCCACGCAGCAGGGACCTACGCCGTCTCGAAGGACTG
GTACGCCGCGTTCATGATGATGTTCTTCTTCTGCGTCCTGCCAACCTGTG
TGGTCGTGCAGCAAATCATCTCCGATCAGATCTTGCCGCGTGTCCTTCCC
GCGAAAAGTACTATCTCTCGGGTTGTTATTTGGCTCGTAAATGCGGCATT
CGTGGCAGCGTGGGGCTATTATACTAGTCCGTGGTTTTTGAATTACAGTA
AGCTCCCGGAGGCGATTGAGTCGATTCCGATGCCGGTTAGTTTTTGGGGG
GTGGTGCTTGGGGTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008303-T1.utr5p1 | KJC3_008303-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008303-T1.utr3p1 | KJC3_008303-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032805 |
| DBxref | PFAM:PF13813 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1544891..1546586 + |
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