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KJC3_008330-T1, KJC3_008330-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008330-T1
Unique NameKJC3_008330-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1725414..1727358+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008330-T1 ID=KJC3_008330-T1|Name=KJC3_008330-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1945bp|location=Sequence derived from alignment at ch6:1725414..1727358+ (Aspergillus niger KJC3)
GGACGACAAGCCTCCACACCTTTGACAGTTCATACAGGTTTGCACGCAAG
GTATTTCTTTTATATCTCTGTGCACCTTGATATTGGGAGCGATACAGCCA
TGCTGCCTCTCACCGGTCGCGCCATTCCAGGCGCCATCCCAAACGCTCTT
CATGGTAAGTGTTCTCCTCATTGTTACCACTAAGTTGCTAAAGTCAGGTA
GTGCGACCGCGTATCACATCTTGCCAATTCCGAATCCAGCCAGTTTCATT
CCTTTCGTCCTCTTCAGTCAAGTCGGCAACAGCAATCGAACAGCGGGGAC
AGTCTGGCCAAGCACTCACTGCTTCTGGAAAGGTGCGGAAAGAGGTGCCC
TTGCCGAGCCAGGAGAAAAAGGAGGGTGCTATGCAATATGTCCTGTTCGT
TACCTGAGACGCATGAGACGAATATCTTTTGTACTGATTCATCTGTAGTA
CCACGCTTGACCAAGTCGCTAACTGGGCACGCCAAAGTTCTTTGTGGCCT
ATGACTTTTGGCCTCGCCTGTTGTGCAGTTGAGATGATGCATCTTTCGAC
CCCCAGATATGACCAGGATCGTCTAGGAATCATTTTCAGAGCGTCACCGC
GGCAATCGGATGTGATGATCGTGGCAGGCACATTGACAAATAAGATGGCT
CCCGCTCTCAGACAGGTGTATGACCAAATGCCTGACCCTCGTTGGGTTGT
CAGTATGGGGAGTTGCGCAAATGGTGGTGGTTATTACCATTACAGTTATT
CTGTTGTTCGCGGATGCGACAGAATTGTACCCGTGGATGTCTACGTTCCC
GGATGTTCGTATACCCTTCATCATCTCTGCAGTAACGGCGGCTAACGGGA
ACAACTCAAGGTCCGCCAACCTCCGAAGCATTGATGTACGGCATCTTTCA
ACTTCAAAAGAAGATGCGGCACACAAGGATCACCCGCATGTGGTATCGCC
GTTAAGCTCAACTTCAAATTGACTACCTCCCTATATTCTCAAGGGTTGGA
AGGGACAGGTTCGGACGCAGACTATATAAGAAGTCTCATCCTGCAAATCA
AGTGTGCGCTCTCATGGATTACCGAACCCTACCGGCGCACAATGGGAGGC
TTTACTTCGAACAGACACATTAGGTGTGTCATGTTATGGTTGAGCAAAGA
AATCTGGCCAACATGTATTGTATGCAATAATTGCAAGCCACTTTCCTAGG
TATATTAGAACGGGGTTAGGTACTAAACTGCAAATTCACTCCTATGTTAC
TCTGCGCTGTTGTACGGCTCACACTAGACTGTATTGTATCGTGGTGTTAA
TAATACTTCAACAGATCTTAAAAAACCACCACTGTTTGGCTCATGCTGCT
AGAATGCTTCCTCGCTTTCATCAAAATATATACTTAGGGACTGCAGGGTC
AAGGACTATCCAATGACAAGTCACTTCTCAACATTTTCATTAGGGGCGCA
AATTTTTGGCATGCCCACGCATGAAAGGACTCCAATCATCAGTAACGGTG
GAGGTGGAAGGGTAGCTTTTCAAAACGTGTCGTCTTTCCGCAAGGCTCAT
ATTCATGTAGAGTATGCCCACCGACCCAATATCACAAGCCATCAATAGCG
GTGGTATCTCTACGATTAGAGAGAGTAATATTAGGGGCTTTTGAGCGAGA
TTTCATATGTCCAGCAGGGTTTCTCGTAGTGCTTTAGAATCATATTTTGC
AAACAGTATCTTTCACGCATGTTTTCTGCCATGGTACCTCGTAGGAATCG
GTAAGGAACCTCTTTAGAGTGTACCAAATCAACGATAGAAACGATCGAGT
TTATCGTTATGGGACAGAAATACCATATCCTATATATATGGCTTGTATGC
CCACATAAGTCAGCTATACGATAAGACTTGCCATGCGACGCTGCATTTAT
CACAAGGAGCATTTTGTAACGAGATGTCCAAAGGACATGGCCATG
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Coding sequence (CDS) from alignment at ch6:1725414..1727358+

>KJC3_008330-T1 ID=KJC3_008330-T1|Name=KJC3_008330-T1|organism=Aspergillus niger KJC3|type=CDS|length=2796bp|location=Sequence derived from alignment at ch6:1725414..1727358+ (Aspergillus niger KJC3)
ATGCTGCCTCTCACCGGTCGCGCCATTCCAGGCGCCATCCCAAACGCTCT
TCATGTGCGACCGCGTATCACATCTTGCCAATTCCGAATCCAGCCAGTTT
CATTCCTTTCGTCCTCTTCAGTCAAGTCGGCAACAGCAATCGAACAGCGG
GGACAGTCTGGCCAAGCACTCACTGCTTCTGGAAAGGTGCGGAAAGAGGT
GCCCTTGCCGAGCCAGGAGAAAAAGGAGGGTGCTATGCAATATGTCCTTA
CCACGCTTGACCAAGTCGCTAACTGGGCACGCCAAAGTTCTTTGTGGCCT
ATGACTTTTGGCCTCGCCTGTTGTGCAGTTGAGATGATGCATCTTTCGAC
CCCCAGATATGACCAGGATCGTCTAGGAATCATTTTCAGAGCGTCACCGC
GGCAATCGGATGTGATGATCGTGGCAGGCACATTGACAAATAAGATGGCT
CCCGCTCTCAGACAGGTGTATGACCAAATGCCTGACCCTCGTTGGGTTGT
CAGTATGGGGAGTTGCGCAAATGGTGGTGGTTATTACCATTACAGTTATT
CTGTTGTTCGCGGATGCGACAGAATTGTACCCGTGGATGTCTACGTTCCC
GGATGTCCGCCAACCTCCGAAGCATTGATGTACGGCATCTTTCAACTTCA
AAAGAAGATGCGGCACACAAGGATCACCCGCATGTGGTATCGCCGTTAAA
TGCTGCCTCTCACCGGTCGCGCCATTCCAGGCGCCATCCCAAACGCTCTT
CATGTGCGACCGCGTATCACATCTTGCCAATTCCGAATCCAGCCAGTTTC
ATTCCTTTCGTCCTCTTCAGTCAAGTCGGCAACAGCAATCGAACAGCGGG
GACAGTCTGGCCAAGCACTCACTGCTTCTGGAAAGGTGCGGAAAGAGGTG
CCCTTGCCGAGCCAGGAGAAAAAGGAGGGTGCTATGCAATATGTCCTTAC
CACGCTTGACCAAGTCGCTAACTGGGCACGCCAAAGTTCTTTGTGGCCTA
TGACTTTTGGCCTCGCCTGTTGTGCAGTTGAGATGATGCATCTTTCGACC
CCCAGATATGACCAGGATCGTCTAGGAATCATTTTCAGAGCGTCACCGCG
GCAATCGGATGTGATGATCGTGGCAGGCACATTGACAAATAAGATGGCTC
CCGCTCTCAGACAGGTGTATGACCAAATGCCTGACCCTCGTTGGGTTGTC
AGTATGGGGAGTTGCGCAAATGGTGGTGGTTATTACCATTACAGTTATTC
TGTTGTTCGCGGATGCGACAGAATTGTACCCGTGGATGTCTACGTTCCCG
GATGTCCGCCAACCTCCGAAGCATTGATGTACGGCATCTTTCAACTTCAA
AAGAAGATGCGGCACACAAGGATCACCCGCATGTGGTATCGCCGTTAAAT
GCTGCCTCTCACCGGTCGCGCCATTCCAGGCGCCATCCCAAACGCTCTTC
ATGTGCGACCGCGTATCACATCTTGCCAATTCCGAATCCAGCCAGTTTCA
TTCCTTTCGTCCTCTTCAGTCAAGTCGGCAACAGCAATCGAACAGCGGGG
ACAGTCTGGCCAAGCACTCACTGCTTCTGGAAAGGTGCGGAAAGAGGTGC
CCTTGCCGAGCCAGGAGAAAAAGGAGGGTGCTATGCAATATGTCCTTACC
ACGCTTGACCAAGTCGCTAACTGGGCACGCCAAAGTTCTTTGTGGCCTAT
GACTTTTGGCCTCGCCTGTTGTGCAGTTGAGATGATGCATCTTTCGACCC
CCAGATATGACCAGGATCGTCTAGGAATCATTTTCAGAGCGTCACCGCGG
CAATCGGATGTGATGATCGTGGCAGGCACATTGACAAATAAGATGGCTCC
CGCTCTCAGACAGGTGTATGACCAAATGCCTGACCCTCGTTGGGTTGTCA
GTATGGGGAGTTGCGCAAATGGTGGTGGTTATTACCATTACAGTTATTCT
GTTGTTCGCGGATGCGACAGAATTGTACCCGTGGATGTCTACGTTCCCGG
ATGTCCGCCAACCTCCGAAGCATTGATGTACGGCATCTTTCAACTTCAAA
AGAAGATGCGGCACACAAGGATCACCCGCATGTGGTATCGCCGTTAAATG
CTGCCTCTCACCGGTCGCGCCATTCCAGGCGCCATCCCAAACGCTCTTCA
TGTGCGACCGCGTATCACATCTTGCCAATTCCGAATCCAGCCAGTTTCAT
TCCTTTCGTCCTCTTCAGTCAAGTCGGCAACAGCAATCGAACAGCGGGGA
CAGTCTGGCCAAGCACTCACTGCTTCTGGAAAGGTGCGGAAAGAGGTGCC
CTTGCCGAGCCAGGAGAAAAAGGAGGGTGCTATGCAATATGTCCTTACCA
CGCTTGACCAAGTCGCTAACTGGGCACGCCAAAGTTCTTTGTGGCCTATG
ACTTTTGGCCTCGCCTGTTGTGCAGTTGAGATGATGCATCTTTCGACCCC
CAGATATGACCAGGATCGTCTAGGAATCATTTTCAGAGCGTCACCGCGGC
AATCGGATGTGATGATCGTGGCAGGCACATTGACAAATAAGATGGCTCCC
GCTCTCAGACAGGTGTATGACCAAATGCCTGACCCTCGTTGGGTTGTCAG
TATGGGGAGTTGCGCAAATGGTGGTGGTTATTACCATTACAGTTATTCTG
TTGTTCGCGGATGCGACAGAATTGTACCCGTGGATGTCTACGTTCCCGGA
TGTCCGCCAACCTCCGAAGCATTGATGTACGGCATCTTTCAACTTCAAAA
GAAGATGCGGCACACAAGGATCACCCGCATGTGGTATCGCCGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0048038quinone binding
GO:0008137NADH dehydrogenase (ubiquinone) activity
GO:0051536iron-sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008330KJC3_008330Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008330-T1KJC3_008330-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008330-T1.utr5p1KJC3_008330-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008330-T1.exon1KJC3_008330-T1.exon1Aspergillus niger KJC3exon
KJC3_008330-T1.exon2KJC3_008330-T1.exon2Aspergillus niger KJC3exon
KJC3_008330-T1.exon3KJC3_008330-T1.exon3Aspergillus niger KJC3exon
KJC3_008330-T1.exon4KJC3_008330-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008330-T1.cdsKJC3_008330-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008330-T1.utr3p1KJC3_008330-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006138
DBxrefInterPro:IPR006137
DBxrefPFAM:PF01058
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1725414..1727358 +
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