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KJC3_008347-T1, KJC3_008347-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008347-T1
Unique NameKJC3_008347-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1758542..1761203-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008347-T1 ID=KJC3_008347-T1|Name=KJC3_008347-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2662bp|location=Sequence derived from alignment at ch6:1758542..1761203- (Aspergillus niger KJC3)
GCACTCAATCTGCAATCAGCAATTCTTCCTCTTCGCCCGGTGGGCCGCTT
GGGGGTCATCAAGTTCTGTTGCCCCCCATGGAACCGGGTCTAACTGTTGC
TAAGAATAAGTAGTTCAATCTCAGGGCATGTCATGTTGGTTATGGACATT
GGAGATTGGAGAACAGGGTATGGAGTATGATTTTAGCTCCGTGAGGATAG
CAGATGAACCCTAGAGACTCCAGATACTACTCCATCGTTCTGGTATCAAT
TGTTATTTGAGGAGGGAGAATGTGATGACGGACGCCCGCTTGCTGACTCC
GGCGGATGCCGATCGCAGCAATTTGGGTTGGCCAAGTGTAACTGGTACCA
TTACTCCGTACATACTGGTTGTACCTGCTCGCTGCTCCGTACTCGTACCT
GGTACTAAGAATAATACCAGGAAAGTCTCATAACCAAGACAAGACTAAGT
CACCCTCAGGAGCACTGAGCCGGTTGCAGAGGCTTGCTTCTGGCCGCAAT
TCGCCCAAACTTCTCCGCTCTCTCGCTCGTTCAATCCATTCGTTCCGTCA
CTCACTCACTCGCTCTTTTCCCTTCCTTCTGTTCGTTCTCTTCTCTTTGG
AGTGTCTTCCCTCAACTCCTCCCACACCCCCTCAAATGGATCTGTCCCAA
TGAGTGTGTTATTTCTGCGCTCTATCTAATATGAGATCGGTGTCTGCTGT
CTCATGGCATCCAGTTTAATTCCGGTGAGTTGCCACTGTGCATACCCTCC
TACTAAATTTTCCTTTCCCGAGAACCCTTTTTTTTTTCTTTCTTAATTCC
ATAATCTGTTGTTTCCTTCTTTTCTTGCCCGCGTTGGTCTGAGGCGACCG
TGCTTATCCCCTGACCATCCGCTAGGCAGTCCATTATCAGCTTCACCACT
CTACGGGCGCTACAGCTCTTATTCTAGTGAAGCAATTCTCTTTTAATTCC
TATTGGGTATAGAGTCGTACCCTTTATTCAAACCTATATTCGTTCTTTTG
CTATCGCAACATTTTTTCGCTCTTTCGATCGCCTTCCGATCCTTCTATAA
ACGCAATCTTAAGGAGACTCGTGCTTTTGCGAAACTTCCACTCAAAACGT
GTACGACCGGTTACTTCTCGGCTGAATACGTCTTACCCATCTTCGTGGAT
CAGTCATTGACAGCTAGACTTGTGAAATTATCGAATCCCAGTTGAACTCA
CTGACTGATACTACTCGGACCCTGATCCTTCTGGACTCAATTGCCATTTA
AAGATGTCTTCTGGTATGGTGCTACCCCACCACGTCACCCTACCTTGGAG
AGCGTATCGCTGTTCTCTGCTATCCGTTATAAACTATGCGCTTGCGGTAT
ACTGAACTTGCCTACAGGATCGGCTGCGGCGGCTGCAGGAGCAGCGGCAG
CAACATCGGCAAACGCCGCTGATGCAGCTACTGCTACACCCACCGAGACA
CAACCGGAAACCACATCCCAATCGACGACAGAGGCAACTCCTACGTCCCA
GGCGACTACATCGCAAGAAACCTCCGCGGAACCAACGACATCCGTATCCA
CACCCTCTACAACGTCCACGTCGTCGACCTCGGAATCAACTTCTTCTGCT
ACAACGATATCCATACCGTCGACGACAAGTAGCACTTCCACTTCGTCTAC
GAGTAGCACCACCGAGGCTCCCCCAACCACTACTTCTACTACCTCTCACA
CTACTGCGACTCCAGTTGTCACCACAGTGGTTACTACACAGACACCAACC
GATGGATCGACCGGCGTGGAGACGCTGACGATAACATCCACCGACACAAC
ACTCCCAACGGGAACTGCTGGTACTGCAGCAAATGGCGTGACTGCTACGG
GCAGTGGATCGGCAGCATCAGCATCGTCGACCGGTGGAAGTGGAAGTGGT
AGCTCAGGGCTTTCAGCAGGCGGCACCATTGCAGTTGCGGTCGTTGTGCC
AGTCGCTTCAGTGGCCATAATCATCCTCGCAGCCTTGTACTTCTGGAGAA
AATGGAAAGCGAAGAAGGCGGCTGAAGAAGAGCGGAGGAAAGAAGTGGAG
GAATACGGTTTCAATCCGAATAACGATCCCTCCTTACCTCCCATCATGGG
TGGTGGAGCCTTTGAACCCAAGGACGATAACACTTCATCGGGCTACCGTG
GCTGGGGAACGACATCTGCTGGCCGCAAGGCATCTACCAACCTATCGAGC
AGCGCCGGAGTCGGCCTGGCGATGTCCGAGGCTGGAAGCGCTCCTGGTTA
TCACCATGCAGCGACCCCGAGCGATGGGACAATTCAGTACTCCGAAGGGC
AAGGTACACTGGGGGAGACTGAACCAATTGGAGTCCTGGGTGCTGCTCCA
GCAGCCGCCGCGAACAGTCGAAATGTCGATATCCACCGTGGTCCATCGAA
CGCCTCGTCAGCCTACTCTGCGGCCAACCATTCTGAAGCGTCCGAAGAGA
GTCACATGTCTGCCACTCACCCCTCAGGAGGTTTCTACGACGATAATCCG
TACTATAATGATATGCAACCGCAATATGGAGCATATGGTGACGGCCCGTA
TGGTGGAGCTCCGCCTGTCATTCGCGATGTTCAGGCGCGGCGCAATACCC
GCATTGAGAACCCTGCCGTGTTCCCTAGACAAGGGAATGCTGGTATTGCG
CAGAATTTCTGA
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Coding sequence (CDS) from alignment at ch6:1758542..1761203-

>KJC3_008347-T1 ID=KJC3_008347-T1|Name=KJC3_008347-T1|organism=Aspergillus niger KJC3|type=CDS|length=2610bp|location=Sequence derived from alignment at ch6:1758542..1761203- (Aspergillus niger KJC3)
GATCGGCTGCGGCGGCTGCAGGAGCAGCGGCAGCAACATCGGCAAACGCC
GCTGATGCAGCTACTGCTACACCCACCGAGACACAACCGGAAACCACATC
CCAATCGACGACAGAGGCAACTCCTACGTCCCAGGCGACTACATCGCAAG
AAACCTCCGCGGAACCAACGACATCCGTATCCACACCCTCTACAACGTCC
ACGTCGTCGACCTCGGAATCAACTTCTTCTGCTACAACGATATCCATACC
GTCGACGACAAGTAGCACTTCCACTTCGTCTACGAGTAGCACCACCGAGG
CTCCCCCAACCACTACTTCTACTACCTCTCACACTACTGCGACTCCAGTT
GTCACCACAGTGGTTACTACACAGACACCAACCGATGGATCGACCGGCGT
GGAGACGCTGACGATAACATCCACCGACACAACACTCCCAACGGGAACTG
CTGGTACTGCAGCAAATGGCGTGACTGCTACGGGCAGTGGATCGGCAGCA
TCAGCATCGTCGACCGGTGGAAGTGGAAGTGGTAGCTCAGGGCTTTCAGC
AGGCGGCACCATTGCAGTTGCGGTCGTTGTGCCAGTCGCTTCAGTGGCCA
TAATCATCCTCGCAGCCTTGTACTTCTGGAGAAAATGGAAAGCGAAGAAG
GCGGCTGAAGAAGAGCGGAGGAAAGAAGTGGAGGAATACGGTTTCAATCC
GAATAACGATCCCTCCTTACCTCCCATCATGGGTGGTGGAGCCTTTGAAC
CCAAGGACGATAACACTTCATCGGGCTACCGTGGCTGGGGAACGACATCT
GCTGGCCGCAAGGCATCTACCAACCTATCGAGCAGCGCCGGAGTCGGCCT
GGCGATGTCCGAGGCTGGAAGCGCTCCTGGTTATCACCATGCAGCGACCC
CGAGCGATGGGACAATTCAGTACTCCGAAGGGCAAGGTACACTGGGGGAG
ACTGAACCAATTGGAGTCCTGGGTGCTGCTCCAGCAGCCGCCGCGAACAG
TCGAAATGTCGATATCCACCGTGGTCCATCGAACGCCTCGTCAGCCTACT
CTGCGGCCAACCATTCTGAAGCGTCCGAAGAGAGTCACATGTCTGCCACT
CACCCCTCAGGAGGTTTCTACGACGATAATCCGTACTATAATGATATGCA
ACCGCAATATGGAGCATATGGTGACGGCCCGTATGGTGGAGCTCCGCCTG
TCATTCGCGATGTTCAGGCGCGGCGCAATACCCGCATTGAGAACCCTGCC
GTGTTCCCTAGACAAGGGAATGCTGGTATTGCGCAGAATTTCTGAATGTC
TTCTGGATCGGCTGCGGCGGCTGCAGGAGCAGCGGCAGCAACATCGGCAA
ACGCCGCTGATGCAGCTACTGCTACACCCACCGAGACACAACCGGAAACC
ACATCCCAATCGACGACAGAGGCAACTCCTACGTCCCAGGCGACTACATC
GCAAGAAACCTCCGCGGAACCAACGACATCCGTATCCACACCCTCTACAA
CGTCCACGTCGTCGACCTCGGAATCAACTTCTTCTGCTACAACGATATCC
ATACCGTCGACGACAAGTAGCACTTCCACTTCGTCTACGAGTAGCACCAC
CGAGGCTCCCCCAACCACTACTTCTACTACCTCTCACACTACTGCGACTC
CAGTTGTCACCACAGTGGTTACTACACAGACACCAACCGATGGATCGACC
GGCGTGGAGACGCTGACGATAACATCCACCGACACAACACTCCCAACGGG
AACTGCTGGTACTGCAGCAAATGGCGTGACTGCTACGGGCAGTGGATCGG
CAGCATCAGCATCGTCGACCGGTGGAAGTGGAAGTGGTAGCTCAGGGCTT
TCAGCAGGCGGCACCATTGCAGTTGCGGTCGTTGTGCCAGTCGCTTCAGT
GGCCATAATCATCCTCGCAGCCTTGTACTTCTGGAGAAAATGGAAAGCGA
AGAAGGCGGCTGAAGAAGAGCGGAGGAAAGAAGTGGAGGAATACGGTTTC
AATCCGAATAACGATCCCTCCTTACCTCCCATCATGGGTGGTGGAGCCTT
TGAACCCAAGGACGATAACACTTCATCGGGCTACCGTGGCTGGGGAACGA
CATCTGCTGGCCGCAAGGCATCTACCAACCTATCGAGCAGCGCCGGAGTC
GGCCTGGCGATGTCCGAGGCTGGAAGCGCTCCTGGTTATCACCATGCAGC
GACCCCGAGCGATGGGACAATTCAGTACTCCGAAGGGCAAGGTACACTGG
GGGAGACTGAACCAATTGGAGTCCTGGGTGCTGCTCCAGCAGCCGCCGCG
AACAGTCGAAATGTCGATATCCACCGTGGTCCATCGAACGCCTCGTCAGC
CTACTCTGCGGCCAACCATTCTGAAGCGTCCGAAGAGAGTCACATGTCTG
CCACTCACCCCTCAGGAGGTTTCTACGACGATAATCCGTACTATAATGAT
ATGCAACCGCAATATGGAGCATATGGTGACGGCCCGTATGGTGGAGCTCC
GCCTGTCATTCGCGATGTTCAGGCGCGGCGCAATACCCGCATTGAGAACC
CTGCCGTGTTCCCTAGACAAGGGAATGCTGGTATTGCGCAGAATTTCTGA
ATGTCTTCTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008347KJC3_008347Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008347-T1KJC3_008347-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008347-T1.cdsKJC3_008347-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008347-T1.exon3KJC3_008347-T1.exon3Aspergillus niger KJC3exon
KJC3_008347-T1.exon2KJC3_008347-T1.exon2Aspergillus niger KJC3exon
KJC3_008347-T1.exon1KJC3_008347-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008347-T1.utr5p2KJC3_008347-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008347-T1.utr5p1KJC3_008347-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1758542..1761203 -
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