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KJC3_008350-T1, KJC3_008350-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008350-T1
Unique NameKJC3_008350-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1778264..1780357+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008350-T1 ID=KJC3_008350-T1|Name=KJC3_008350-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2094bp|location=Sequence derived from alignment at ch6:1778264..1780357+ (Aspergillus niger KJC3)
CCCCTTTCCCGAGAACAATCTAGTATACCCCAGATATAGGGTATACCTGG
AAGCTCAAGTCATAACTGTGCCTGGAATGGCTGACATGGATACCCGTATA
GAAGCTATCCAACCTTAAGCCATGAATCGCAGGGACGAAATTGAGCCGTC
TGACCCCAATGCTCCTTTGCTCCCTTCCGAGCCACGGGTAGACCATGAAC
CCCAACATGAAGGTAGCAGGAGGCTGAAGCCTACTACCAACTCGGAACAA
ACAAACGGGTGGTTTATATACGCTCTGACCTTCTCCGCAGGCATAAGTGG
GTTGTTATTTGGTTACGAGTAGGTCCAATCTTGATAGCCTCCCCATCGAC
GACAACTTCATGTAGAGAGGTGATTGCTGTCCTCCGTTATACTGACACTC
CGCCCTTTGAAGCACAGGTGTCATTTCCGCAACCTTAGTATCGATCGGGT
CCGACCTCTCTAACCATCGTCTAACGACATTGGACAAGAGTCTCGTGACA
TCCTGCACCAGCCTGTTCGCTCTGATTGCGAGTCCGCTAGCGGGAATCCT
GGCAGATAAATTCGGTCGCAGAAAGGTCATTCTCGTTGCAGACGTGCTTT
TCACTCTTGGCGCTTTGATACAAGCTGTCACAAGCGCAGTATGGGGCATG
ATAGCTGGAAGAAGCATTGTTGGCCTGGCGGTTGGTGGAGCAAGTCTGGT
GACTCCATTGTATGTTCAATCCTTACTAAGGGTGTCCCTCGAAGGAGTAT
AGTAGGGAGGAATAAAGTTGTCCTTTTGTCTAACATATCTCCAGATATAT
ATCCGAGTTGGCACCTTCTCATGCTAGAGGAAGGCTTGTGACGATACTGA
GTCTTTTTATTACAGGCGGACAAGTCGTTGCTTATATCATCGGCTGGTTA
TTCTCCTCTGTATCTGGGGGCTGGCGCTATATTGTTGGCCTTGGAATGCT
CCCAGCAGTTTTTCAATTTTTCATAGTTCTAGCTCTTCCAGAAACCCCTC
GGTGGCTGGTCCAAGCAGGGTTTGAAGAGAAAGCTACGAAAGTCCTCTCC
CGGGTCTACGGGAGTCATTCCGACAGTGGCCTCATGGCTAAGCAGGTTAT
GCGTGATATCCAGCAAGAAGTGGCTGAGGAGGAGGAAGAGTTGACTCAAA
CCAATAAGCCCTCCACAGGGAATTGGCAGTGGCTGACGAACGTTACGCAG
TGTGCTCGCCACTTAATCCTCGTCGGTGGTAATCGGAGGGCGTTGATTAT
AGCGGTTATGCTGCAAGCCACACAACAATTGTGTGGATTCAATAGTCTCA
TGTATTTCTCGGCGACAATTTTCTCCATGCTGTCGTTTTCATCACCAACA
CTCGTGTCATTGTCGGTGGCGTTGACCAATTTCTTATTCACCTTACTCGC
ATTTGCCTTTATCGATAGGATTGGTCGGCGCCGCATCCTCCTGTACTCAA
TGCCAGTGATGGCTCTCTCACTCATTGCTTGCGCTTTTACGTTCGGCTCA
GTCGAAATGCCGAACCCCGAGTCAAGGGTACGAGCGGAAGATGCCACAAT
TGATAGCGCTTTCCTTCCTATTGTTATCTTGATATGCCTCACCGTTTATG
TGGGAGCTTATGCATTCGGGCTTGGAAACGTGCCCTGGCAGCAATCAGAG
CTCTTCCCCTTGAATGTGCGCTCCTTGGGATCAGCCTTGGCTACTGCCAC
GAATTGGGGGTCAAACTTCGTTGTCGGTCTAACTTTTCTGCCTATGATGG
AATGGCTCTCACCTGGATGGACATTTGCGGCCTATGCGGCCGTATGTGTG
TTCGGTTGGTTTGGTGTATACGCTATCTATCCCGAGATGAGCGGGCTTCG
CTTGGAGGAAGTCAAGGAACTTCTATCAGACGGCTGGGGTGTTCAGGAAA
GTTTAAGAAGACGTCGTGGTCGTCCCGATGTGAGCTAAGGGGCTAGCTTC
TGCTCATACGAGACCCGCGTGCAGACTTTATAGACCTTGTTATCAACTAC
AAGCCAGCGTTTCGGAGTCTATTTTCTGGGCCTAAATCGAAGTATTATAT
ATGCAATAGTTGGCTTATAGAAGCGCACATCTTACCTCCTGTGA
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Coding sequence (CDS) from alignment at ch6:1778264..1780357+

>KJC3_008350-T1 ID=KJC3_008350-T1|Name=KJC3_008350-T1|organism=Aspergillus niger KJC3|type=CDS|length=4914bp|location=Sequence derived from alignment at ch6:1778264..1780357+ (Aspergillus niger KJC3)
ATGAATCGCAGGGACGAAATTGAGCCGTCTGACCCCAATGCTCCTTTGCT
CCCTTCCGAGCCACGGGTAGACCATGAACCCCAACATGAAGGTAGCAGGA
GGCTGAAGCCTACTACCAACTCGGAACAAACAAACGGGTGGTTTATATAC
GCTCTGACCTTCTCCGCAGGCATAAGTGGGTTGTTATTTGGTTACGACAC
AGGTGTCATTTCCGCAACCTTAGTATCGATCGGGTCCGACCTCTCTAACC
ATCGTCTAACGACATTGGACAAGAGTCTCGTGACATCCTGCACCAGCCTG
TTCGCTCTGATTGCGAGTCCGCTAGCGGGAATCCTGGCAGATAAATTCGG
TCGCAGAAAGGTCATTCTCGTTGCAGACGTGCTTTTCACTCTTGGCGCTT
TGATACAAGCTGTCACAAGCGCAGTATGGGGCATGATAGCTGGAAGAAGC
ATTGTTGGCCTGGCGGTTGGTGGAGCAAGTCTGGTGACTCCATTATATAT
ATCCGAGTTGGCACCTTCTCATGCTAGAGGAAGGCTTGTGACGATACTGA
GTCTTTTTATTACAGGCGGACAAGTCGTTGCTTATATCATCGGCTGGTTA
TTCTCCTCTGTATCTGGGGGCTGGCGCTATATTGTTGGCCTTGGAATGCT
CCCAGCAGTTTTTCAATTTTTCATAGTTCTAGCTCTTCCAGAAACCCCTC
GGTGGCTGGTCCAAGCAGGGTTTGAAGAGAAAGCTACGAAAGTCCTCTCC
CGGGTCTACGGGAGTCATTCCGACAGTGGCCTCATGGCTAAGCAGGTTAT
GCGTGATATCCAGCAAGAAGTGGCTGAGGAGGAGGAAGAGTTGACTCAAA
CCAATAAGCCCTCCACAGGGAATTGGCAGTGGCTGACGAACGTTACGCAG
TGTGCTCGCCACTTAATCCTCGTCGGTGGTAATCGGAGGGCGTTGATTAT
AGCGGTTATGCTGCAAGCCACACAACAATTGTGTGGATTCAATAGTCTCA
TGTATTTCTCGGCGACAATTTTCTCCATGCTGTCGTTTTCATCACCAACA
CTCGTGTCATTGTCGGTGGCGTTGACCAATTTCTTATTCACCTTACTCGC
ATTTGCCTTTATCGATAGGATTGGTCGGCGCCGCATCCTCCTGTACTCAA
TGCCAGTGATGGCTCTCTCACTCATTGCTTGCGCTTTTACGTTCGGCTCA
GTCGAAATGCCGAACCCCGAGTCAAGGGTACGAGCGGAAGATGCCACAAT
TGATAGCGCTTTCCTTCCTATTGTTATCTTGATATGCCTCACCGTTTATG
TGGGAGCTTATGCATTCGGGCTTGGAAACGTGCCCTGGCAGCAATCAGAG
CTCTTCCCCTTGAATGTGCGCTCCTTGGGATCAGCCTTGGCTACTGCCAC
GAATTGGGGGTCAAACTTCGTTGTCGGTCTAACTTTTCTGCCTATGATGG
AATGGCTCTCACCTGGATGGACATTTGCGGCCTATGCGGCCGTATGTGTG
TTCGGTTGGTTTGGTGTATACGCTATCTATCCCGAGATGAGCGGGCTTCG
CTTGGAGGAAGTCAAGGAACTTCTATCAGACGGCTGGGGTGTTCAGGAAA
GTTTAAGAAGACGTCGTGGTCGTCCCGATGTGAGCTAAATGAATCGCAGG
GACGAAATTGAGCCGTCTGACCCCAATGCTCCTTTGCTCCCTTCCGAGCC
ACGGGTAGACCATGAACCCCAACATGAAGGTAGCAGGAGGCTGAAGCCTA
CTACCAACTCGGAACAAACAAACGGGTGGTTTATATACGCTCTGACCTTC
TCCGCAGGCATAAGTGGGTTGTTATTTGGTTACGACACAGGTGTCATTTC
CGCAACCTTAGTATCGATCGGGTCCGACCTCTCTAACCATCGTCTAACGA
CATTGGACAAGAGTCTCGTGACATCCTGCACCAGCCTGTTCGCTCTGATT
GCGAGTCCGCTAGCGGGAATCCTGGCAGATAAATTCGGTCGCAGAAAGGT
CATTCTCGTTGCAGACGTGCTTTTCACTCTTGGCGCTTTGATACAAGCTG
TCACAAGCGCAGTATGGGGCATGATAGCTGGAAGAAGCATTGTTGGCCTG
GCGGTTGGTGGAGCAAGTCTGGTGACTCCATTATATATATCCGAGTTGGC
ACCTTCTCATGCTAGAGGAAGGCTTGTGACGATACTGAGTCTTTTTATTA
CAGGCGGACAAGTCGTTGCTTATATCATCGGCTGGTTATTCTCCTCTGTA
TCTGGGGGCTGGCGCTATATTGTTGGCCTTGGAATGCTCCCAGCAGTTTT
TCAATTTTTCATAGTTCTAGCTCTTCCAGAAACCCCTCGGTGGCTGGTCC
AAGCAGGGTTTGAAGAGAAAGCTACGAAAGTCCTCTCCCGGGTCTACGGG
AGTCATTCCGACAGTGGCCTCATGGCTAAGCAGGTTATGCGTGATATCCA
GCAAGAAGTGGCTGAGGAGGAGGAAGAGTTGACTCAAACCAATAAGCCCT
CCACAGGGAATTGGCAGTGGCTGACGAACGTTACGCAGTGTGCTCGCCAC
TTAATCCTCGTCGGTGGTAATCGGAGGGCGTTGATTATAGCGGTTATGCT
GCAAGCCACACAACAATTGTGTGGATTCAATAGTCTCATGTATTTCTCGG
CGACAATTTTCTCCATGCTGTCGTTTTCATCACCAACACTCGTGTCATTG
TCGGTGGCGTTGACCAATTTCTTATTCACCTTACTCGCATTTGCCTTTAT
CGATAGGATTGGTCGGCGCCGCATCCTCCTGTACTCAATGCCAGTGATGG
CTCTCTCACTCATTGCTTGCGCTTTTACGTTCGGCTCAGTCGAAATGCCG
AACCCCGAGTCAAGGGTACGAGCGGAAGATGCCACAATTGATAGCGCTTT
CCTTCCTATTGTTATCTTGATATGCCTCACCGTTTATGTGGGAGCTTATG
CATTCGGGCTTGGAAACGTGCCCTGGCAGCAATCAGAGCTCTTCCCCTTG
AATGTGCGCTCCTTGGGATCAGCCTTGGCTACTGCCACGAATTGGGGGTC
AAACTTCGTTGTCGGTCTAACTTTTCTGCCTATGATGGAATGGCTCTCAC
CTGGATGGACATTTGCGGCCTATGCGGCCGTATGTGTGTTCGGTTGGTTT
GGTGTATACGCTATCTATCCCGAGATGAGCGGGCTTCGCTTGGAGGAAGT
CAAGGAACTTCTATCAGACGGCTGGGGTGTTCAGGAAAGTTTAAGAAGAC
GTCGTGGTCGTCCCGATGTGAGCTAAATGAATCGCAGGGACGAAATTGAG
CCGTCTGACCCCAATGCTCCTTTGCTCCCTTCCGAGCCACGGGTAGACCA
TGAACCCCAACATGAAGGTAGCAGGAGGCTGAAGCCTACTACCAACTCGG
AACAAACAAACGGGTGGTTTATATACGCTCTGACCTTCTCCGCAGGCATA
AGTGGGTTGTTATTTGGTTACGACACAGGTGTCATTTCCGCAACCTTAGT
ATCGATCGGGTCCGACCTCTCTAACCATCGTCTAACGACATTGGACAAGA
GTCTCGTGACATCCTGCACCAGCCTGTTCGCTCTGATTGCGAGTCCGCTA
GCGGGAATCCTGGCAGATAAATTCGGTCGCAGAAAGGTCATTCTCGTTGC
AGACGTGCTTTTCACTCTTGGCGCTTTGATACAAGCTGTCACAAGCGCAG
TATGGGGCATGATAGCTGGAAGAAGCATTGTTGGCCTGGCGGTTGGTGGA
GCAAGTCTGGTGACTCCATTATATATATCCGAGTTGGCACCTTCTCATGC
TAGAGGAAGGCTTGTGACGATACTGAGTCTTTTTATTACAGGCGGACAAG
TCGTTGCTTATATCATCGGCTGGTTATTCTCCTCTGTATCTGGGGGCTGG
CGCTATATTGTTGGCCTTGGAATGCTCCCAGCAGTTTTTCAATTTTTCAT
AGTTCTAGCTCTTCCAGAAACCCCTCGGTGGCTGGTCCAAGCAGGGTTTG
AAGAGAAAGCTACGAAAGTCCTCTCCCGGGTCTACGGGAGTCATTCCGAC
AGTGGCCTCATGGCTAAGCAGGTTATGCGTGATATCCAGCAAGAAGTGGC
TGAGGAGGAGGAAGAGTTGACTCAAACCAATAAGCCCTCCACAGGGAATT
GGCAGTGGCTGACGAACGTTACGCAGTGTGCTCGCCACTTAATCCTCGTC
GGTGGTAATCGGAGGGCGTTGATTATAGCGGTTATGCTGCAAGCCACACA
ACAATTGTGTGGATTCAATAGTCTCATGTATTTCTCGGCGACAATTTTCT
CCATGCTGTCGTTTTCATCACCAACACTCGTGTCATTGTCGGTGGCGTTG
ACCAATTTCTTATTCACCTTACTCGCATTTGCCTTTATCGATAGGATTGG
TCGGCGCCGCATCCTCCTGTACTCAATGCCAGTGATGGCTCTCTCACTCA
TTGCTTGCGCTTTTACGTTCGGCTCAGTCGAAATGCCGAACCCCGAGTCA
AGGGTACGAGCGGAAGATGCCACAATTGATAGCGCTTTCCTTCCTATTGT
TATCTTGATATGCCTCACCGTTTATGTGGGAGCTTATGCATTCGGGCTTG
GAAACGTGCCCTGGCAGCAATCAGAGCTCTTCCCCTTGAATGTGCGCTCC
TTGGGATCAGCCTTGGCTACTGCCACGAATTGGGGGTCAAACTTCGTTGT
CGGTCTAACTTTTCTGCCTATGATGGAATGGCTCTCACCTGGATGGACAT
TTGCGGCCTATGCGGCCGTATGTGTGTTCGGTTGGTTTGGTGTATACGCT
ATCTATCCCGAGATGAGCGGGCTTCGCTTGGAGGAAGTCAAGGAACTTCT
ATCAGACGGCTGGGGTGTTCAGGAAAGTTTAAGAAGACGTCGTGGTCGTC
CCGATGTGAGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008350KJC3_008350Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008350-T1KJC3_008350-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008350-T1.utr5p1KJC3_008350-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008350-T1.exon1KJC3_008350-T1.exon1Aspergillus niger KJC3exon
KJC3_008350-T1.exon2KJC3_008350-T1.exon2Aspergillus niger KJC3exon
KJC3_008350-T1.exon3KJC3_008350-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008350-T1.cdsKJC3_008350-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008350-T1.utr3p1KJC3_008350-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1778264..1780357 +
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