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KJC3_008352-T1, KJC3_008352-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008352-T1
Unique NameKJC3_008352-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1782196..1784019-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008352-T1 ID=KJC3_008352-T1|Name=KJC3_008352-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1824bp|location=Sequence derived from alignment at ch6:1782196..1784019- (Aspergillus niger KJC3)
TGATTCTCCTGTTGCGTGTTGATTCGGCCCTCCACCACCGCCTTCTTCCC
CCCCAAGAACCCCCCTAATACTCCCCGGCAGGGCCACCCACGAGCTTACG
TCCCTGTTGACCTTATAGAGTCGATCCCGATACCGAGCAGAAAGTTGATC
AATATGGTATGTCCCCAACTCACCCCAATGGTCCCAGGCGATTTGCCCAT
GACTATTGCTAACGTCCAGGGAACTAGGCTGCTCAAGTAATCTCCAATTC
CGGACACGATGAGATGATTGTACGTGAACCGAGACAGAATCCTCCTACGC
CATCGTGACAATGGCTTCATCCCTTTCTGCCTGGCCCCTGAGACTGACCG
CAGCGCATAGCACGATGCCGGCCTGGACTACTACGGCCGCAGATTGGCAA
CATGTTCATCGGACAAAACGATAAAGATCTTTGAAATCGAAGGAGAGACA
CATCGGTTGATTGAGACATTGAAGGGGTGAGGATCCTGATGCCTGGTCAT
CTTACGCGCCATCGTTTCTAACCTCCGTCCGTGTGTGAGCAGACATGAAG
GAGCTGTGTGGTGTGTGGCTTGGGTACGTCATAATGGCTTTCATTGTCAA
GCTGTCCTATTCAACTATGTATCTGACTCTGGTCTTCTCTAGGCGCACCC
TAAGTTCGGAACTATCCTCGCTTCCTCCTCGTACGATGGAAAGGTGCTCA
TCTGGCGCGAACAACACCAGAACGCCACGTCACCCGTCGCTGGCGGCGCT
TGGACGAAGGTGTTCGACTTCTCTCTACACACCGCTTCAGTGAACATGGT
CTCCTGGGCTCCGCATGAAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGG
ACGGACATGTTAGCGTTCTTGAGTTCCGTGACAATAGCTGGACTCACCAG
ATCTTCCACGCCCACGGTATGGGCGTGAACTCTATCAGCTGGGCACCTGC
AGCCGCCCCGGGCAGCTTGATCAGCTCCAACCCTGGACCGGGCCAGCAGC
GGAGATTCGTCACTGGTGGAAGCGACAACCTGCTGAAGATCTGGGACTAC
AAGTATGCACCATGAACCGCTTCCCACTGATACTCTGCTTTCAATTGAAC
TAAGCTGACCCTTACACCTCTACAGCCCGGAAACCAAGACCTACAACAAC
ACGCAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATGTCGCTTGGTC
GCCTAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCTCAAGACAAGA
CAGTCCGGATCTGGACTTCCGATGCGTCAAACCCTGGTCAGTGGACCAGC
CAGCAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCTGGAGCCCTAG
TGGAAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTCAGCTTGTGGA
AGGAAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATATCGAGGAGTAG
GCTTCAGATTTCAAATTTCCTTAACTTTCAAATTTCATATTTCACGTGTG
ATAACGGATAACTTGGGTTTCTGCCATGTATTTCATCCGACCCAGACGTT
ATCAAAAATAAAAAACGAGCTCAAAAACAGGCAAGACCGTCATTGTTTCC
AGAAAATAAACGGACCCTTGTCCAGCGTCTCCAGCAGATCTATCCAACTC
CCGATCATGATATTACCTTCTGGTAAGATAACGCCCTCGTAAACCTGTAC
CAAGTAAAAATCAGACTCAAAGTCCGACGGCGGCCATCCTGTCTCGAAAA
GCCAAGGGTCCTCATCCATAGCGGCCTCTGTGCCATTATGAGCAGGAGGA
ACGGGTAGCTGCTCTTGGTCCCAC
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Coding sequence (CDS) from alignment at ch6:1782196..1784019-

>KJC3_008352-T1 ID=KJC3_008352-T1|Name=KJC3_008352-T1|organism=Aspergillus niger KJC3|type=CDS|length=5562bp|location=Sequence derived from alignment at ch6:1782196..1784019- (Aspergillus niger KJC3)
CCCGGAAACCAAGACCTACAACAACACGCAGACTCTCGAAGGCCACTCCG
ACTGGGTTCGGGATGTCGCTTGGTCGCCTAGCGTTCTTTCCAAGTCCTAC
ATCGCCTCTGCCTCTCAAGACAAGACAGTCCGGATCTGGACTTCCGATGC
GTCAAACCCTGGTCAGTGGACCAGCCAGCAACTTGAGTTCGACACTGTAC
TCTGGCGAGTTAGCTGGAGCCCTAGTGGAAACATTCTTGCTGTGAGCGGT
GGCGATAACAAGGTCAGCTTGTGGAAGGAAAACCTCAAGGGGCAATGGGA
GAAGGTAAAGGATATCGAGGAGTAGGCGCACCCTAAGTTCGGAACTATCC
TCGCTTCCTCCTCGTACGATGGAAAGGTGCTCATCTGGCGCGAACAACAC
CAGAACGCCACGTCACCCGTCGCTGGCGGCGCTTGGACGAAGGTGTTCGA
CTTCTCTCTACACACCGCTTCAGTGAACATGGTCTCCTGGGCTCCGCATG
AAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACGGACATGTTAGCGTT
CTTGAGTTCCGTGACAATAGCTGGACTCACCAGATCTTCCACGCCCACGG
TATGGGCGTGAACTCTATCAGCTGGGCACCTGCAGCCGCCCCGGGCAGCT
TGATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGAGATTCGTCACTGGT
GGAAGCGACAACCTGCTGAAGATCTGGGACTACAAACATGAAGGAGCTGT
GTGGTGTGTGGCTTGGCACGATGCCGGCCTGGACTACTACGGCCGCAGAT
TGGCAACATGTTCATCGGACAAAACGATAAAGATCTTTGAAATCGAAGGA
GAGACACATCGGTTGATTGAGACATTGAAGGGGCTGCTCAAGTAATCTCC
AATTCCGGACACGATGAGATGATTATGCCCGGAAACCAAGACCTACAACA
ACACGCAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATGTCGCTTGG
TCGCCTAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCTCAAGACAA
GACAGTCCGGATCTGGACTTCCGATGCGTCAAACCCTGGTCAGTGGACCA
GCCAGCAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCTGGAGCCCT
AGTGGAAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTCAGCTTGTG
GAAGGAAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATATCGAGGAGT
AGGCGCACCCTAAGTTCGGAACTATCCTCGCTTCCTCCTCGTACGATGGA
AAGGTGCTCATCTGGCGCGAACAACACCAGAACGCCACGTCACCCGTCGC
TGGCGGCGCTTGGACGAAGGTGTTCGACTTCTCTCTACACACCGCTTCAG
TGAACATGGTCTCCTGGGCTCCGCATGAAAGTGGCTGTCTCCTCGCTTGC
GCCTCCTCGGACGGACATGTTAGCGTTCTTGAGTTCCGTGACAATAGCTG
GACTCACCAGATCTTCCACGCCCACGGTATGGGCGTGAACTCTATCAGCT
GGGCACCTGCAGCCGCCCCGGGCAGCTTGATCAGCTCCAACCCTGGACCG
GGCCAGCAGCGGAGATTCGTCACTGGTGGAAGCGACAACCTGCTGAAGAT
CTGGGACTACAAACATGAAGGAGCTGTGTGGTGTGTGGCTTGGCACGATG
CCGGCCTGGACTACTACGGCCGCAGATTGGCAACATGTTCATCGGACAAA
ACGATAAAGATCTTTGAAATCGAAGGAGAGACACATCGGTTGATTGAGAC
ATTGAAGGGGCTGCTCAAGTAATCTCCAATTCCGGACACGATGAGATGAT
TATGCCCGGAAACCAAGACCTACAACAACACGCAGACTCTCGAAGGCCAC
TCCGACTGGGTTCGGGATGTCGCTTGGTCGCCTAGCGTTCTTTCCAAGTC
CTACATCGCCTCTGCCTCTCAAGACAAGACAGTCCGGATCTGGACTTCCG
ATGCGTCAAACCCTGGTCAGTGGACCAGCCAGCAACTTGAGTTCGACACT
GTACTCTGGCGAGTTAGCTGGAGCCCTAGTGGAAACATTCTTGCTGTGAG
CGGTGGCGATAACAAGGTCAGCTTGTGGAAGGAAAACCTCAAGGGGCAAT
GGGAGAAGGTAAAGGATATCGAGGAGTAGGCGCACCCTAAGTTCGGAACT
ATCCTCGCTTCCTCCTCGTACGATGGAAAGGTGCTCATCTGGCGCGAACA
ACACCAGAACGCCACGTCACCCGTCGCTGGCGGCGCTTGGACGAAGGTGT
TCGACTTCTCTCTACACACCGCTTCAGTGAACATGGTCTCCTGGGCTCCG
CATGAAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACGGACATGTTAG
CGTTCTTGAGTTCCGTGACAATAGCTGGACTCACCAGATCTTCCACGCCC
ACGGTATGGGCGTGAACTCTATCAGCTGGGCACCTGCAGCCGCCCCGGGC
AGCTTGATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGAGATTCGTCAC
TGGTGGAAGCGACAACCTGCTGAAGATCTGGGACTACAAACATGAAGGAG
CTGTGTGGTGTGTGGCTTGGCACGATGCCGGCCTGGACTACTACGGCCGC
AGATTGGCAACATGTTCATCGGACAAAACGATAAAGATCTTTGAAATCGA
AGGAGAGACACATCGGTTGATTGAGACATTGAAGGGGCTGCTCAAGTAAT
CTCCAATTCCGGACACGATGAGATGATTATGCCCGGAAACCAAGACCTAC
AACAACACGCAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATGTCGC
TTGGTCGCCTAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCTCAAG
ACAAGACAGTCCGGATCTGGACTTCCGATGCGTCAAACCCTGGTCAGTGG
ACCAGCCAGCAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCTGGAG
CCCTAGTGGAAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTCAGCT
TGTGGAAGGAAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATATCGAG
GAGTAGGCGCACCCTAAGTTCGGAACTATCCTCGCTTCCTCCTCGTACGA
TGGAAAGGTGCTCATCTGGCGCGAACAACACCAGAACGCCACGTCACCCG
TCGCTGGCGGCGCTTGGACGAAGGTGTTCGACTTCTCTCTACACACCGCT
TCAGTGAACATGGTCTCCTGGGCTCCGCATGAAAGTGGCTGTCTCCTCGC
TTGCGCCTCCTCGGACGGACATGTTAGCGTTCTTGAGTTCCGTGACAATA
GCTGGACTCACCAGATCTTCCACGCCCACGGTATGGGCGTGAACTCTATC
AGCTGGGCACCTGCAGCCGCCCCGGGCAGCTTGATCAGCTCCAACCCTGG
ACCGGGCCAGCAGCGGAGATTCGTCACTGGTGGAAGCGACAACCTGCTGA
AGATCTGGGACTACAAACATGAAGGAGCTGTGTGGTGTGTGGCTTGGCAC
GATGCCGGCCTGGACTACTACGGCCGCAGATTGGCAACATGTTCATCGGA
CAAAACGATAAAGATCTTTGAAATCGAAGGAGAGACACATCGGTTGATTG
AGACATTGAAGGGGCTGCTCAAGTAATCTCCAATTCCGGACACGATGAGA
TGATTATGCCCGGAAACCAAGACCTACAACAACACGCAGACTCTCGAAGG
CCACTCCGACTGGGTTCGGGATGTCGCTTGGTCGCCTAGCGTTCTTTCCA
AGTCCTACATCGCCTCTGCCTCTCAAGACAAGACAGTCCGGATCTGGACT
TCCGATGCGTCAAACCCTGGTCAGTGGACCAGCCAGCAACTTGAGTTCGA
CACTGTACTCTGGCGAGTTAGCTGGAGCCCTAGTGGAAACATTCTTGCTG
TGAGCGGTGGCGATAACAAGGTCAGCTTGTGGAAGGAAAACCTCAAGGGG
CAATGGGAGAAGGTAAAGGATATCGAGGAGTAGGCGCACCCTAAGTTCGG
AACTATCCTCGCTTCCTCCTCGTACGATGGAAAGGTGCTCATCTGGCGCG
AACAACACCAGAACGCCACGTCACCCGTCGCTGGCGGCGCTTGGACGAAG
GTGTTCGACTTCTCTCTACACACCGCTTCAGTGAACATGGTCTCCTGGGC
TCCGCATGAAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACGGACATG
TTAGCGTTCTTGAGTTCCGTGACAATAGCTGGACTCACCAGATCTTCCAC
GCCCACGGTATGGGCGTGAACTCTATCAGCTGGGCACCTGCAGCCGCCCC
GGGCAGCTTGATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGAGATTCG
TCACTGGTGGAAGCGACAACCTGCTGAAGATCTGGGACTACAAACATGAA
GGAGCTGTGTGGTGTGTGGCTTGGCACGATGCCGGCCTGGACTACTACGG
CCGCAGATTGGCAACATGTTCATCGGACAAAACGATAAAGATCTTTGAAA
TCGAAGGAGAGACACATCGGTTGATTGAGACATTGAAGGGGCTGCTCAAG
TAATCTCCAATTCCGGACACGATGAGATGATTATGCCCGGAAACCAAGAC
CTACAACAACACGCAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATG
TCGCTTGGTCGCCTAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCT
CAAGACAAGACAGTCCGGATCTGGACTTCCGATGCGTCAAACCCTGGTCA
GTGGACCAGCCAGCAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCT
GGAGCCCTAGTGGAAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTC
AGCTTGTGGAAGGAAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATAT
CGAGGAGTAGGCGCACCCTAAGTTCGGAACTATCCTCGCTTCCTCCTCGT
ACGATGGAAAGGTGCTCATCTGGCGCGAACAACACCAGAACGCCACGTCA
CCCGTCGCTGGCGGCGCTTGGACGAAGGTGTTCGACTTCTCTCTACACAC
CGCTTCAGTGAACATGGTCTCCTGGGCTCCGCATGAAAGTGGCTGTCTCC
TCGCTTGCGCCTCCTCGGACGGACATGTTAGCGTTCTTGAGTTCCGTGAC
AATAGCTGGACTCACCAGATCTTCCACGCCCACGGTATGGGCGTGAACTC
TATCAGCTGGGCACCTGCAGCCGCCCCGGGCAGCTTGATCAGCTCCAACC
CTGGACCGGGCCAGCAGCGGAGATTCGTCACTGGTGGAAGCGACAACCTG
CTGAAGATCTGGGACTACAAACATGAAGGAGCTGTGTGGTGTGTGGCTTG
GCACGATGCCGGCCTGGACTACTACGGCCGCAGATTGGCAACATGTTCAT
CGGACAAAACGATAAAGATCTTTGAAATCGAAGGAGAGACACATCGGTTG
ATTGAGACATTGAAGGGGCTGCTCAAGTAATCTCCAATTCCGGACACGAT
GAGATGATTATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SEC13KJC3_008352Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008352-T1KJC3_008352-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008352-T1.cdsKJC3_008352-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008352-T1.utr3p1KJC3_008352-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008352-T1.exon6KJC3_008352-T1.exon6Aspergillus niger KJC3exon
KJC3_008352-T1.exon5KJC3_008352-T1.exon5Aspergillus niger KJC3exon
KJC3_008352-T1.exon4KJC3_008352-T1.exon4Aspergillus niger KJC3exon
KJC3_008352-T1.exon3KJC3_008352-T1.exon3Aspergillus niger KJC3exon
KJC3_008352-T1.exon2KJC3_008352-T1.exon2Aspergillus niger KJC3exon
KJC3_008352-T1.exon1KJC3_008352-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008352-T1.utr5p1KJC3_008352-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
ProductGTPase-activating protein S13
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1782196..1784019 -
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