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KJC3_008371-T1, KJC3_008371-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008371-T1
Unique NameKJC3_008371-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1835187..1837099+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008371-T1 ID=KJC3_008371-T1|Name=KJC3_008371-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1913bp|location=Sequence derived from alignment at ch6:1835187..1837099+ (Aspergillus niger KJC3)
GCGATACTTCTGTCTGCTGTTCTGCGTTCGATAACTGTCATTTGCAGACG
GAAGACTCCTTTCACTTATGCCCGACGAGGTTAGCGATTTACAATGGCAT
GCGCTACACTGAACGAGACGGTATTATACTAAATTTGAAGGAATCGTATG
CTCTTCCCTTGTTTAAAAGACGAAGCCAGAGACTCCATATAATCAAGGCT
TCATATCCCTGCCCACCACCGCTAATCCTTTCCTCGTGGCACATATCTGA
AAGGATGAACACCCAAGTCACATGATGGATCTACCACGTGACATATCTCA
TAATCACCAATCGGGAACCCTTGCACGGCCCACCTTTCACGGCCAAGGAT
GGGTGTAAATCGAAGCGATATGACAACATCCAGGGTCCCGTTCGCTTATA
ATCTGCGAGGCACTTGATGCAGTAACTTTCTATTTCCTCCGAACCAATAG
CGGACGACACTGGGGGAGAGAAAGCAGCAATGGACCCAGTAGCACGTTCA
GAATCTGCTACGCCCCGAGCGTCTGGTGCCTCGACGCCGCAGCCACCGTC
TAAAGTCCAGCAGCCTAAGCCACAAGCACTCCCCAGCAGGTCTGGTCCAT
CTGCCATCCTCGTGTCAACGCGACAAAAAGGCAATCCGATATTGAATCAT
ATCAAACTACTGCCATGGGAATATGCAGATATTCCGGCCGACTATGTGGT
CGGAAACACCACCTGTGCTCTATTTCTTTCCTTGAAGTACCACCGGTTAC
ATCCCGAATATATCTACTCGCGAATTCGTCTCATAGCAGGAAAATACCTT
TTACGTATTATCCTGGTTATTGTGGATATCCCGAATCATGAAGAAAGCTT
GAAGGAGCTTTCGAAGACATCCATCGTCAATAATCTGACGCTGATCCTTT
GTTGGTCTGCACCCGAAGCTGCACACTATCTTGAATTGTTCAAGTCTTCT
GAAAACTCTCAACCTACTGCTATTCGCACGCAGCAAGCTCAGTCATACAA
GGAATCTCTTGTTGAGTTCGTCACGACACCCCGAAGCATTAATAAATCAG
ATGCAGCAAGCTTGATATCTACGTTTGGGAGCCTGCAGAATGCGGTTAAT
GCCCAACCAGAGCAGATCAGTGCAGTACCCGGATGGGGTGAGAAGAAGGT
CAGGCAGTGGTGTACTACAGTAAGAGAAGGCTTTAGGGCCGAGTCGGCGA
AGAGGGTAACTGCCAGGGGAGGAATCGCTAGAGGTCATGCAACCGGGGTT
GTTGAGGATCATGGAGACCGAACCTTCAATTCTTTGGAAACAAGTGAAGA
CAACGCCGCAGAATCAATCCTAGCAGATGCAGAGGAGGGTCGGCTAGAAA
CACGGAGACAAGCTATCGAAGAGCGACGATTGCAGGAGTCGAGTCAGCAG
GAGGAAGAGATGAGTGAGGGCATCATGGCGGCTCTGGCGAAGTATCGACA
GGACGGCGGTTGATCCCTTAACTAGGTGGATTCTGTTTATAACATGGAGA
CCGTGGTGTAGAGGGACATTGCCTTGCGGATGCCAACAACTAGCCCCAGC
CTGTAGTCAAGATATCAAGCGGGAGACTGGAGCCAATAGTGCAACTCCTC
ATTGACGGGCCGGGGGTTTATTACTCCCTTGTATGCCTTGAAATTACTGA
GCGGGATTCGAGATGCTGCCCGGAGAGTCTACAGTGGGATGGGACAAGCT
GCACGTGACTGATGTTAATGGAGTGGGGTAACATGTAGCTTGAATTTTTT
TCCAAGCTAACTATCAACTTTATTGCCGACTCGCTTAGATTTACAATATA
GGTAGGGCTGGTCAGCTTAGCGGGAAGTACTAGAAGATGACAGAAGCTTA
GCCAAGATGCATCGGCCATTGGCGCACTAGACACCCATACCGTCAATAGT
AGACCACTAGGGC
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Coding sequence (CDS) from alignment at ch6:1835187..1837099+

>KJC3_008371-T1 ID=KJC3_008371-T1|Name=KJC3_008371-T1|organism=Aspergillus niger KJC3|type=CDS|length=984bp|location=Sequence derived from alignment at ch6:1835187..1837099+ (Aspergillus niger KJC3)
ATGGACCCAGTAGCACGTTCAGAATCTGCTACGCCCCGAGCGTCTGGTGC
CTCGACGCCGCAGCCACCGTCTAAAGTCCAGCAGCCTAAGCCACAAGCAC
TCCCCAGCAGGTCTGGTCCATCTGCCATCCTCGTGTCAACGCGACAAAAA
GGCAATCCGATATTGAATCATATCAAACTACTGCCATGGGAATATGCAGA
TATTCCGGCCGACTATGTGGTCGGAAACACCACCTGTGCTCTATTTCTTT
CCTTGAAGTACCACCGGTTACATCCCGAATATATCTACTCGCGAATTCGT
CTCATAGCAGGAAAATACCTTTTACGTATTATCCTGGTTATTGTGGATAT
CCCGAATCATGAAGAAAGCTTGAAGGAGCTTTCGAAGACATCCATCGTCA
ATAATCTGACGCTGATCCTTTGTTGGTCTGCACCCGAAGCTGCACACTAT
CTTGAATTGTTCAAGTCTTCTGAAAACTCTCAACCTACTGCTATTCGCAC
GCAGCAAGCTCAGTCATACAAGGAATCTCTTGTTGAGTTCGTCACGACAC
CCCGAAGCATTAATAAATCAGATGCAGCAAGCTTGATATCTACGTTTGGG
AGCCTGCAGAATGCGGTTAATGCCCAACCAGAGCAGATCAGTGCAGTACC
CGGATGGGGTGAGAAGAAGGTCAGGCAGTGGTGTACTACAGTAAGAGAAG
GCTTTAGGGCCGAGTCGGCGAAGAGGGTAACTGCCAGGGGAGGAATCGCT
AGAGGTCATGCAACCGGGGTTGTTGAGGATCATGGAGACCGAACCTTCAA
TTCTTTGGAAACAAGTGAAGACAACGCCGCAGAATCAATCCTAGCAGATG
CAGAGGAGGGTCGGCTAGAAACACGGAGACAAGCTATCGAAGAGCGACGA
TTGCAGGAGTCGAGTCAGCAGGAGGAAGAGATGAGTGAGGGCATCATGGC
GGCTCTGGCGAAGTATCGACAGGACGGCGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
GO:0004519endonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008371KJC3_008371Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008371-T1KJC3_008371-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008371-T1.utr5p1KJC3_008371-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_008371-T1.utr5p2KJC3_008371-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008371-T1.exon1KJC3_008371-T1.exon1Aspergillus niger KJC3exon
KJC3_008371-T1.exon2KJC3_008371-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008371-T1.cdsKJC3_008371-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008371-T1.utr3p1KJC3_008371-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264DOU
DBxrefInterPro:IPR010994
DBxrefInterPro:IPR011335
DBxrefInterPro:IPR004579
DBxrefPFAM:PF03834
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1835187..1837099 +
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