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KJC3_008390-T2, KJC3_008390-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008390-T2
Unique NameKJC3_008390-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1888591..1891560-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008390-T2 ID=KJC3_008390-T2|Name=KJC3_008390-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2970bp|location=Sequence derived from alignment at ch6:1888591..1891560- (Aspergillus niger KJC3)
CCTCAACTGATTCAGTTACGACGACTACTGACTGGCACTCTTTACTAACT
GCAACTAAATGAACCCCCCGCATTCGCACTGTCTAACCACATCCATCTTA
GTCCACCGGCTTCTCCACGTTTGCTTTTGGTTTTAAATCCGGGGTCACTT
CGCTTTTCTCTTTTCCCTCACTTTTCTCTCTCTCTCTCTTCCTCTTCGGC
TTCTGCTTCTATTCTCTCTGCACTTCCTCCTCTATTCGCTTCCCACATCC
ACACCCCCCAACAACGCCAGCTACATCAACTACACCAACTACACCCACTC
CATCCTCTCCATCCCTCCTATGCACAGGCAATGCCATGTCCCGCCCCCAG
GTCAGCATCGACCGTCTCACTCCCCGTCGCGTCCATGCCGAACCCCGCGA
ATCAATGAACTGCAAGTCTTGCAGAAAACGAAAGGTAACCATAACTATTA
TATTTCGTGAGATCATCTACGATTTGATCTGACACATGAGTGCCAGATCA
AATGTAATCGGTTACGTCCCAGCTGTGAGGCCTGCAAGGTCTTCCAGTGT
CCATGCATCTATGGTCTGGTCCCTCTTGTCTGCCACTCCAACCCCGAACT
TTTACTCATTCTGCTAGACGCCGTTCCCAAAAAGCGGGGACCCAAAACCG
ATGTCCTGGAGGCCCTGTTGAAGCGTGTCGACGGGCTGGAAAAACGCCTC
CAGGAAGACTCGCCGATTTCCCCTACCTCGGCTACTTCTCCCGTCAAATC
CATGGACCAGCAACTGCTGCCATCCGCCTCGACGCCATTCCAGTTCCCTA
CGGCGCCTCATGGCTTTCGCCCTCCCCCGCAATCGCAGCCGCCGCCGCAG
CAACACCGGCTGCCGGATGCCATGTTGGACACCTATTTTACCCGCCTACA
TGGGAAGCCCTATTGGATTTTGGACGAAACGGCGACCCGTCAACGACATC
AGCATGGACAATTGCCGATGCATTTGTCTATGGCCATTTATGCCCTAACT
CTGAGGTATTAATGTTCCAACGCCTGCAAGAATCTGGCTGATCTTGTAGA
TATACGACGCCGAATCCACCGCAAGGGAGCCTGGAGTATGCTCGTCAGGC
AAGACGGCTGGTCGATATTGACAACCCGTCTATCGAAGGGACCCAGTCTC
TGCTATTGCTCTGCCATACCTTTTTCGCCTATGGGTGTGGCAAAACAGCC
TATATGGTATTAGGTATGTGCGACGCCAACTGACGCAGACTGGTACTGAC
TGCTCAGCCAATGCGGTGTCCATGACCCTGGCGTTGGACTTGTATCGAGA
AGCACCCGCAGCGCTGCCCGCGGCAGAACGCGAGATGCGACGGCGTCTAT
TCTGGACCGTCTACGTGATGGATCGCTTTCTCACCTGTGGCTCCAAGCGA
CCGTGTCTTATTGCCGACCATTCCATCGTCCTGCGTCTTCCGGGCAGCGG
GTCTGAAACGGGCGAATGGTTTAATCCGGTCGGCCCTAATATCCATTACT
CCCCGGATCGTCGCAAAGGCCCTGGTGGCCCGGCCCTGTTGGTCGACATT
ACGCGCATTTTGGGCGTCACGCATCGCTACCTCGCCGCAGGAGGCGTCAA
AGGCGACTCACACTTTCCCTGGCACGCCCTCTCCAATCTGTCCAAGATCC
GCCAGGAACTCGACCTCTGGGCGGCCGGCACACAGGATTTGTTTGCATCG
ATCGAGACGCTGTTCGGCCATCCAGAGAGCACGCTGCTGCTTCTGAGCAA
GCTTATCTATCACCTCGTGCACTGTCTGCTCTATCGGCCCTTCCTCCCCA
TCGACCTGGTCGAGCTGCGCGGCACGGGACAGCATCAGTCGTGGCAGATC
GAGGCAACGACGCTCTGTTTTTCGCATGCCAACGCCATCGCCGAGCTGGT
GGAGCTGGCCCGACACGCGCCACGCATCGAGTGGCCCGCCCTGGTGGCAT
ACTGCGTGTGCACGGCTGGCACCGTACACGTACACGGAGTCCACTACCAC
GGGCGCGAGGGAGAAGTGTTTGCGTCGAGCGCAGACTTTCTCGCACGCGA
GATGCACCAGCTGTCGTGGCTGCGGCAGTACTGGGCGGGGGTGCAGCACC
AGCGGGAGATGCTGCAAAGTATTTCAGCGTGCCATGCCGAGCTGGTACGG
ACGATGGCGGCGCGACCGGTGCGGTTTGCCCCGGTGTTCCACCTCGAGGA
CTTCCTGGACCGGTATCCGGGGCTGGCCGTGGATGGGGCGCATTTGCGCT
TAGTGGACGGAGACGAGCCGTAAGCCACCACCACCTATTCATTCAACTTA
CAATACTAATTTGTGTAGGTTACCACTGGACCGACCGGATTTCAACAGAC
TCATGTACCCTCCCGCATCGACTCTACCCTCCCAAGGCCGAGGATCCATC
AGCTTCCAGCCATCGCCGACATGGCCACAACCCGAGCTCGCTCTACCCGA
GAGCAGTCTAGGCTTCTCACCAGGGGTGAGCAACTCCCCTGCACCGTTCC
TCTCCGACCCTTTCACCGCACCAACACCGCCCGCACAGCCCCAGTACGCA
ACGTTTCCGTTTGAAGCCACGCCGGGCGGACCGGCACTGACGCCGGACGC
CCCCTCACAGGGCAGCTCCAGCGCCACCGCAACAGGCACAGCTGCAGGAG
CAGCAACAGGAGCGGGCGAAGGAGAAAAAGACCCGTTTCTGAGTCTGCTG
GAGCAGCTGGCAGAAAACGAGCATTCGCAGGGCGGACCCAGCGAGCTGGA
CTTTTTCCTGGGCGAGGGGCTAGATATGGTGATGCCCGAGGTGGAGGTGG
AGAATCCTTGAGAAGCCGAATATACGAGCCATAATCTAAGGCTTAGGGAC
AAGTGAATACTAGAGCGATGATACCCTGTACATTATAATCAAAACCAGCA
TAGTATATATATACAAAGTAGCATATGATGATATATATAGTTAGGCCACG
AAATGATCACATGACATGAC
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Coding sequence (CDS) from alignment at ch6:1888591..1891560-

>KJC3_008390-T2 ID=KJC3_008390-T2|Name=KJC3_008390-T2|organism=Aspergillus niger KJC3|type=CDS|length=2982bp|location=Sequence derived from alignment at ch6:1888591..1891560- (Aspergillus niger KJC3)
GTTACCACTGGACCGACCGGATTTCAACAGACTCATGTACCCTCCCGCAT
CGACTCTACCCTCCCAAGGCCGAGGATCCATCAGCTTCCAGCCATCGCCG
ACATGGCCACAACCCGAGCTCGCTCTACCCGAGAGCAGTCTAGGCTTCTC
ACCAGGGGTGAGCAACTCCCCTGCACCGTTCCTCTCCGACCCTTTCACCG
CACCAACACCGCCCGCACAGCCCCAGTACGCAACGTTTCCGTTTGAAGCC
ACGCCGGGCGGACCGGCACTGACGCCGGACGCCCCCTCACAGGGCAGCTC
CAGCGCCACCGCAACAGGCACAGCTGCAGGAGCAGCAACAGGAGCGGGCG
AAGGAGAAAAAGACCCGTTTCTGAGTCTGCTGGAGCAGCTGGCAGAAAAC
GAGCATTCGCAGGGCGGACCCAGCGAGCTGGACTTTTTCCTGGGCGAGGG
GCTAGATATGGTGATGCCCGAGGTGGAGGTGGAGAATCCTTGAATGACCC
TGGCGTTGGACTTGTATCGAGAAGCACCCGCAGCGCTGCCCGCGGCAGAA
CGCGAGATGCGACGGCGTCTATTCTGGACCGTCTACGTGATGGATCGCTT
TCTCACCTGTGGCTCCAAGCGACCGTGTCTTATTGCCGACCATTCCATCG
TCCTGCGTCTTCCGGGCAGCGGGTCTGAAACGGGCGAATGGTTTAATCCG
GTCGGCCCTAATATCCATTACTCCCCGGATCGTCGCAAAGGCCCTGGTGG
CCCGGCCCTGTTGGTCGACATTACGCGCATTTTGGGCGTCACGCATCGCT
ACCTCGCCGCAGGAGGCGTCAAAGGCGACTCACACTTTCCCTGGCACGCC
CTCTCCAATCTGTCCAAGATCCGCCAGGAACTCGACCTCTGGGCGGCCGG
CACACAGGATTTGTTTGCATCGATCGAGACGCTGTTCGGCCATCCAGAGA
GCACGCTGCTGCTTCTGAGCAAGCTTATCTATCACCTCGTGCACTGTCTG
CTCTATCGGCCCTTCCTCCCCATCGACCTGGTCGAGCTGCGCGGCACGGG
ACAGCATCAGTCGTGGCAGATCGAGGCAACGACGCTCTGTTTTTCGCATG
CCAACGCCATCGCCGAGCTGGTGGAGCTGGCCCGACACGCGCCACGCATC
GAGTGGCCCGCCCTGGTGGCATACTGCGTGTGCACGGCTGGCACCGTACA
CGTACACGGAGTCCACTACCACGGGCGCGAGGGAGAAGTGTTTGCGTCGA
GCGCAGACTTTCTCGCACGCGAGATGCACCAGCTGTCGTGGCTGCGGCAG
TACTGGGCGGGGGTGCAGCACCAGCGGGAGATGCTGCAAAGTATTTCAGC
GTGCCATGCCGAGCTGGTACGGACGATGGCGGCGCGACCGGTGCGGTTTG
CCCCGGTGTTCCACCTCGAGGACTTCCTGGACCGGTATCCGGGGCTGGCC
GTGGATGGGGCGCATTTGCGCTTAGTGGACGGAGACGAGCCGTTACCACT
GGACCGACCGGATTTCAACAGACTCATGTACCCTCCCGCATCGACTCTAC
CCTCCCAAGGCCGAGGATCCATCAGCTTCCAGCCATCGCCGACATGGCCA
CAACCCGAGCTCGCTCTACCCGAGAGCAGTCTAGGCTTCTCACCAGGGGT
GAGCAACTCCCCTGCACCGTTCCTCTCCGACCCTTTCACCGCACCAACAC
CGCCCGCACAGCCCCAGTACGCAACGTTTCCGTTTGAAGCCACGCCGGGC
GGACCGGCACTGACGCCGGACGCCCCCTCACAGGGCAGCTCCAGCGCCAC
CGCAACAGGCACAGCTGCAGGAGCAGCAACAGGAGCGGGCGAAGGAGAAA
AAGACCCGTTTCTGAGTCTGCTGGAGCAGCTGGCAGAAAACGAGCATTCG
CAGGGCGGACCCAGCGAGCTGGACTTTTTCCTGGGCGAGGGGCTAGATAT
GGTGATGCCCGAGGTGGAGGTGGAGAATCCTTGAATGACCCTGGCGTTGG
ACTTGTATCGAGAAGCACCCGCAGCGCTGCCCGCGGCAGAACGCGAGATG
CGACGGCGTCTATTCTGGACCGTCTACGTGATGGATCGCTTTCTCACCTG
TGGCTCCAAGCGACCGTGTCTTATTGCCGACCATTCCATCGTCCTGCGTC
TTCCGGGCAGCGGGTCTGAAACGGGCGAATGGTTTAATCCGGTCGGCCCT
AATATCCATTACTCCCCGGATCGTCGCAAAGGCCCTGGTGGCCCGGCCCT
GTTGGTCGACATTACGCGCATTTTGGGCGTCACGCATCGCTACCTCGCCG
CAGGAGGCGTCAAAGGCGACTCACACTTTCCCTGGCACGCCCTCTCCAAT
CTGTCCAAGATCCGCCAGGAACTCGACCTCTGGGCGGCCGGCACACAGGA
TTTGTTTGCATCGATCGAGACGCTGTTCGGCCATCCAGAGAGCACGCTGC
TGCTTCTGAGCAAGCTTATCTATCACCTCGTGCACTGTCTGCTCTATCGG
CCCTTCCTCCCCATCGACCTGGTCGAGCTGCGCGGCACGGGACAGCATCA
GTCGTGGCAGATCGAGGCAACGACGCTCTGTTTTTCGCATGCCAACGCCA
TCGCCGAGCTGGTGGAGCTGGCCCGACACGCGCCACGCATCGAGTGGCCC
GCCCTGGTGGCATACTGCGTGTGCACGGCTGGCACCGTACACGTACACGG
AGTCCACTACCACGGGCGCGAGGGAGAAGTGTTTGCGTCGAGCGCAGACT
TTCTCGCACGCGAGATGCACCAGCTGTCGTGGCTGCGGCAGTACTGGGCG
GGGGTGCAGCACCAGCGGGAGATGCTGCAAAGTATTTCAGCGTGCCATGC
CGAGCTGGTACGGACGATGGCGGCGCGACCGGTGCGGTTTGCCCCGGTGT
TCCACCTCGAGGACTTCCTGGACCGGTATCCGGGGCTGGCCGTGGATGGG
GCGCATTTGCGCTTAGTGGACGGAGACGAGCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008390KJC3_008390Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008390-T2KJC3_008390-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008390-T2.cdsKJC3_008390-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008390-T2.utr3p1KJC3_008390-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008390-T2.exon4KJC3_008390-T2.exon4Aspergillus niger KJC3exon
KJC3_008390-T2.exon3KJC3_008390-T2.exon3Aspergillus niger KJC3exon
KJC3_008390-T2.exon2KJC3_008390-T2.exon2Aspergillus niger KJC3exon
KJC3_008390-T2.exon1KJC3_008390-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008390-T2.utr5p3KJC3_008390-T2.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_008390-T2.utr5p2KJC3_008390-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008390-T2.utr5p1KJC3_008390-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1888591..1891560 -
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