You are here

Home

KJC3_008408-T2, KJC3_008408-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008408-T2
Unique NameKJC3_008408-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1977793..1981315-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008408-T2 ID=KJC3_008408-T2|Name=KJC3_008408-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3523bp|location=Sequence derived from alignment at ch6:1977793..1981315- (Aspergillus niger KJC3)
GTCTCCGCTTCCCCTCAATTTCTGCATCCACTTTTCCCTTTCTTCACCTC
ATCTCTTTTCCACCATTTCCCTCACACGATCTCTCTCTCTCTTTCTCTCT
TTCTACTCATACCTCCTCGTTTATCTCCCTATATATCATCTCCAAGACCA
TGCTTTGATCCGATCATGGCCCCTCCTCCCCCTTTCCCCTCGTCTTCGCC
CTTCGCCCTTGTCGTCCCAACTTCGTCATGCAAGACCAACGGCCCGAGGT
TCTCACCGTCTCCATTGTCTTCTTCGTCATCGCAACTGTCTTCGTGGCCC
TGCGCTTCATCTCCCGCATCTTTATTGTCCAGAAGGTCGCCCTCCATGAT
TATTTGATGCTCCTGGCCTGGGTACCTCCTCTTTTCCTCTTCCCCCCTCT
CTCATCTCTCTAGTCAGCTCCTCATTCTCCGATCTTCCCGCAGGTCCTCG
ACTTCGGCTTTTCCTTCTCCCTCTTCTACGCCACCCACAAAGGTCTGGGT
CTCCACGATACCGACATTCGCGAAGACCAACGCGCCGGCCTCAATCGCGC
CGACTATGCCTTCACCGTCCTCTACGTGAGTCGCCCGTGGACTCCTCCGC
CCGTCGCTTCCCCTCTGACTGCCCCAGAACCCGGCCCTCATGGCCGTCAA
AACCTCCATTCTGGTCTTCTACCTAACCCTCACCCAAGGCGAGAAGGTCT
TTCGCTTGGCCAACTACGTGACTCTCTTCGTCGTCAATGCCGCCGGACTC
GCCTTGACCCTCGTGAATGTCTTCCAATGCCGTCCCGTCAGCGCGGCCGT
TTCCTATCCCTTTCCCGAGGGTGCCAAGTGCATCGACATCCTGACCCTAT
ACCTATCCTCGTCGCCCGTCAACATTGTGACCGACTTGGCCATTCTCTTC
CTGCCCAATCCCATCCTGACGCAAATGCGACTGCCGCGCAAGCAAAAGAT
CATCCTCGTCATCACCTTCAGTTTTGGTTTCTTTGTCGCCGTCGTCGATG
TCATCCGCATTGCCTACATCCAGGATGCGGCCACCTCCCGTCAGATCGCG
TTGAGAGAGGTCCATCTGCAGGATACCCCGGGTGATGACCTCAGCTGTAC
GTCCCCTGTCCTTTCTTTCTCCCTATCTTCCTGCTGATCGCCCCCAGGGT
ACGGGGCGTTTTCATTTATGTGGTCCGTCATCGAAGTCAACGTTTCCGTC
ATCTGTGCCTGTGTGCCCAGTCTCAAGCCGCTTGTCGCGCGACTCATCCC
GAAGCTGATCCGTGACACTGACGGGAGCTCCCAGGCCACCGACCTTCCCT
TGCCCGCTCCCGATCCACCCCCTGAGATTCCGACCGTCACCGGGCCTCCT
ACTGCCCGGCGCGCGTCGCGCTCACCACAGTCCGCCAGCCAGGACAATAA
GCCGTCGCATTCGGAGAGCCACAGCAGTCATGCGGCCTCGGCCCGGGTTG
ACCTCTCCGATATGTTGACCAGCGCGCCCGAGGCGCCTCCGGATGTCGAG
AACCGGACGAACACCGTCACCACAACCACGTCGTATCCGCCCAGCATCAC
CTTCTTCGACTTCGTCAATATGAAGAAGCCGGCCAACATGCTGAAGCTGA
GCAATAAGGAGTCCATTGCCCCGATCGCGCTGACCACCATCTTGTTCTTC
CTCTGGGGCTTTGCATACGGCTTGCTGGCTATCCTGAACGAGCAGATTCA
GGATATCCTGGGCCTGGACGTCTGGCAGTCATTTGGTCTGCATGCGGTGT
ACTTTGGGGGGTATCTGGTGGCGCCAGCGTTTGTGGGGGGCGTCGTGCTG
AAGCGCTGGGGGTTCAAGTGCACCTTTATCACTGGGCTGTGCATTTATGC
CTGCGGCACTCTGGTCTTCTGGCCGTCAGCCGTGCTGACTTCGTACCCTG
GTTTCATCGTGTCCAATTTCATTGTGGGCAGTGGACTGGCGGTGCTGGAG
ACGGCCGCCAATCCGTTCATTGCGCTATGCGGACCACTCGAAAACTCGGA
GATTCGGCTGAACATCTCGCAGGGCGTGCAGGCAATTGGCAGCGTCGTCT
CGCAGCTACTGGCCAAGAAGGTGCTGTTCAAATCTGTGACCGATGTGAGT
ACTCTGGTCGATGTGCAGTGGACATATTTGGGCATCGCACTGTTCGACGT
ACTCCTCGCTCTCGCTTTCTATTATCTGCCTATCCCCGAGGCATCGGACG
AGGATCTGGAGGAACTGGCCAACCGCCGCCGCGCCGACAACCGCGCCACC
GTCGCTGGCATCCCCGTGGTTTGGCTGACACTGGGCCTCGGCGTCTGGTC
TCAGTTTTTCTACGTGGCCGGCCAAGAAGTGATATCGATGAGCTTCGACA
GCTATGTCCGCACCGTGCACCCACTGTCCTATCTCAGTCCCTTTGAACAG
CTCACGGTCGCACACACGGTGTTCGCGGTCGGCCGCTTCCTCGCCGCCTT
CGTCCAATGGTTCCTCAAACCCCGCTGGATACTTATGCTCTCTTACATCG
GCATGATCGTCTTCTCCGTCCTGTGCATGAAAATGACCGGACGAGCCGCT
GAAGCCATGGCTCTCATGGTGTACCTGTTCGAGAGCGGCGTATTCAGTAT
CATTTTTGCCATCTCGCTGCGCGGCACCGGTCGACACACCAAGACCGCGA
CCGTACTGCTCACGGTGGCCATCGGCGGCGGCGCCTTCTTCCCATTCGCG
CAATACGCAGCCGAGCTGGCAGGCGGCATCCGCTATTCCTACTGCGTGCT
GGTGGCGCTGTTCAGTGCGGGCGCCATCTTCCCCATCTACCTCAACGTAG
TGCCGGCAGCCAAGAAGCAGGTGGACCCGGTACCGAACGAGCACCTGCGA
CATCCCCGCCGGCGCAGTCGCATCAAAGCCAACGTCATGGCGCGCGAAAA
GGAGAACCCATCGGTGGGTGGGGTGCTCTCGCGCCGGCGCAGCGTAGTGT
CGGAGCCGTTGCCGACGGTGCAGCTGGCGGACCACACGAAGCAGACGTCG
GGGGGATTGATGCATGAATTGGCGCCATGGCCAGAGCAGCGCGGGGAGCG
TGCGGTGCAGACAGATTAAGTTATTCTTTCTGCTCTTTGTTTTGTTTCTT
TCTTTCTTCCTTTCTTTCTTTCTATTTCTTGATTATATCTCTACGGGAGG
ATATTTGCCATGATACCCATTATTTTGGATTGGAACGTGTTTTAGCGTGG
AGTTGGCTGATTGCATTGCTGGAGTACTGTACATATATACCTACATACGT
ACTTGATTTTCTACAAGGGTTGACGGCCTTCCCTTTCCGTTTTAGTGCTC
CCCCCTCAAACCCGGCACTGCCATCAAGAAAGAGACGAGTAGGTCGAGCT
ACTATTCCTTCTGATGCCCACGGCCTTGTTCCCGGGTAGGACTCTGCTGG
AGGTGATCGTGCTGCGTCAACACGGCAAATAAGTTTTGGCGGGCTTTCTC
GGTCAGACCTGGGGACCTGACAACCCGATCGGGTTTGCGGGGGACCCTTT
CTGGACATACATATACAGAGTAC
back to top

Coding sequence (CDS) from alignment at ch6:1977793..1981315-

>KJC3_008408-T2 ID=KJC3_008408-T2|Name=KJC3_008408-T2|organism=Aspergillus niger KJC3|type=CDS|length=4758bp|location=Sequence derived from alignment at ch6:1977793..1981315- (Aspergillus niger KJC3)
GGTACGGGGCGTTTTCATTTATGTGGTCCGTCATCGAAGTCAACGTTTCC
GTCATCTGTGCCTGTGTGCCCAGTCTCAAGCCGCTTGTCGCGCGACTCAT
CCCGAAGCTGATCCGTGACACTGACGGGAGCTCCCAGGCCACCGACCTTC
CCTTGCCCGCTCCCGATCCACCCCCTGAGATTCCGACCGTCACCGGGCCT
CCTACTGCCCGGCGCGCGTCGCGCTCACCACAGTCCGCCAGCCAGGACAA
TAAGCCGTCGCATTCGGAGAGCCACAGCAGTCATGCGGCCTCGGCCCGGG
TTGACCTCTCCGATATGTTGACCAGCGCGCCCGAGGCGCCTCCGGATGTC
GAGAACCGGACGAACACCGTCACCACAACCACGTCGTATCCGCCCAGCAT
CACCTTCTTCGACTTCGTCAATATGAAGAAGCCGGCCAACATGCTGAAGC
TGAGCAATAAGGAGTCCATTGCCCCGATCGCGCTGACCACCATCTTGTTC
TTCCTCTGGGGCTTTGCATACGGCTTGCTGGCTATCCTGAACGAGCAGAT
TCAGGATATCCTGGGCCTGGACGTCTGGCAGTCATTTGGTCTGCATGCGG
TGTACTTTGGGGGGTATCTGGTGGCGCCAGCGTTTGTGGGGGGCGTCGTG
CTGAAGCGCTGGGGGTTCAAGTGCACCTTTATCACTGGGCTGTGCATTTA
TGCCTGCGGCACTCTGGTCTTCTGGCCGTCAGCCGTGCTGACTTCGTACC
CTGGTTTCATCGTGTCCAATTTCATTGTGGGCAGTGGACTGGCGGTGCTG
GAGACGGCCGCCAATCCGTTCATTGCGCTATGCGGACCACTCGAAAACTC
GGAGATTCGGCTGAACATCTCGCAGGGCGTGCAGGCAATTGGCAGCGTCG
TCTCGCAGCTACTGGCCAAGAAGGTGCTGTTCAAATCTGTGACCGATGTG
AGTACTCTGGTCGATGTGCAGTGGACATATTTGGGCATCGCACTGTTCGA
CGTACTCCTCGCTCTCGCTTTCTATTATCTGCCTATCCCCGAGGCATCGG
ACGAGGATCTGGAGGAACTGGCCAACCGCCGCCGCGCCGACAACCGCGCC
ACCGTCGCTGGCATCCCCGTGGTTTGGCTGACACTGGGCCTCGGCGTCTG
GTCTCAGTTTTTCTACGTGGCCGGCCAAGAAGTGATATCGATGAGCTTCG
ACAGCTATGTCCGCACCGTGCACCCACTGTCCTATCTCAGTCCCTTTGAA
CAGCTCACGGTCGCACACACGGTGTTCGCGGTCGGCCGCTTCCTCGCCGC
CTTCGTCCAATGGTTCCTCAAACCCCGCTGGATACTTATGCTCTCTTACA
TCGGCATGATCGTCTTCTCCGTCCTGTGCATGAAAATGACCGGACGAGCC
GCTGAAGCCATGGCTCTCATGGTGTACCTGTTCGAGAGCGGCGTATTCAG
TATCATTTTTGCCATCTCGCTGCGCGGCACCGGTCGACACACCAAGACCG
CGACCGTACTGCTCACGGTGGCCATCGGCGGCGGCGCCTTCTTCCCATTC
GCGCAATACGCAGCCGAGCTGGCAGGCGGCATCCGCTATTCCTACTGCGT
GCTGGTGGCGCTGTTCAGTGCGGGCGCCATCTTCCCCATCTACCTCAACG
TAGTGCCGGCAGCCAAGAAGCAGGTGGACCCGGTACCGAACGAGCACCTG
CGACATCCCCGCCGGCGCAGTCGCATCAAAGCCAACGTCATGGCGCGCGA
AAAGGAGAACCCATCGGTGGGTGGGGTGCTCTCGCGCCGGCGCAGCGTAG
TGTCGGAGCCGTTGCCGACGGTGCAGCTGGCGGACCACACGAAGCAGACG
TCGGGGGGATTGATGCATGAATTGGCGCCATGGCCAGAGCAGCGCGGGGA
GCGTGCGGTGCAGACAGATTAAATGGCCGTCAAAACCTCCATTCTGGTCT
TCTACCTAACCCTCACCCAAGGCGAGAAGGTCTTTCGCTTGGCCAACTAC
GTGACTCTCTTCGTCGTCAATGCCGCCGGACTCGCCTTGACCCTCGTGAA
TGTCTTCCAATGCCGTCCCGTCAGCGCGGCCGTTTCCTATCCCTTTCCCG
AGGGTGCCAAGTGCATCGACATCCTGACCCTATACCTATCCTCGTCGCCC
GTCAACATTGTGACCGACTTGGCCATTCTCTTCCTGCCCAATCCCATCCT
GACGCAAATGCGACTGCCGCGCAAGCAAAAGATCATCCTCGTCATCACCT
TCAGTTTTGGTTTCTTTGTCGCCGTCGTCGATGTCATCCGCATTGCCTAC
ATCCAGGATGCGGCCACCTCCCGTCAGATCGCGTTGAGAGAGGTCCATCT
GCAGGATACCCCGGGTGATGACCTCAGCTGGTACGGGGCGTTTTCATTTA
TGTGGTCCGTCATCGAAGTCAACGTTTCCGTCATCTGTGCCTGTGTGCCC
AGTCTCAAGCCGCTTGTCGCGCGACTCATCCCGAAGCTGATCCGTGACAC
TGACGGGAGCTCCCAGGCCACCGACCTTCCCTTGCCCGCTCCCGATCCAC
CCCCTGAGATTCCGACCGTCACCGGGCCTCCTACTGCCCGGCGCGCGTCG
CGCTCACCACAGTCCGCCAGCCAGGACAATAAGCCGTCGCATTCGGAGAG
CCACAGCAGTCATGCGGCCTCGGCCCGGGTTGACCTCTCCGATATGTTGA
CCAGCGCGCCCGAGGCGCCTCCGGATGTCGAGAACCGGACGAACACCGTC
ACCACAACCACGTCGTATCCGCCCAGCATCACCTTCTTCGACTTCGTCAA
TATGAAGAAGCCGGCCAACATGCTGAAGCTGAGCAATAAGGAGTCCATTG
CCCCGATCGCGCTGACCACCATCTTGTTCTTCCTCTGGGGCTTTGCATAC
GGCTTGCTGGCTATCCTGAACGAGCAGATTCAGGATATCCTGGGCCTGGA
CGTCTGGCAGTCATTTGGTCTGCATGCGGTGTACTTTGGGGGGTATCTGG
TGGCGCCAGCGTTTGTGGGGGGCGTCGTGCTGAAGCGCTGGGGGTTCAAG
TGCACCTTTATCACTGGGCTGTGCATTTATGCCTGCGGCACTCTGGTCTT
CTGGCCGTCAGCCGTGCTGACTTCGTACCCTGGTTTCATCGTGTCCAATT
TCATTGTGGGCAGTGGACTGGCGGTGCTGGAGACGGCCGCCAATCCGTTC
ATTGCGCTATGCGGACCACTCGAAAACTCGGAGATTCGGCTGAACATCTC
GCAGGGCGTGCAGGCAATTGGCAGCGTCGTCTCGCAGCTACTGGCCAAGA
AGGTGCTGTTCAAATCTGTGACCGATGTGAGTACTCTGGTCGATGTGCAG
TGGACATATTTGGGCATCGCACTGTTCGACGTACTCCTCGCTCTCGCTTT
CTATTATCTGCCTATCCCCGAGGCATCGGACGAGGATCTGGAGGAACTGG
CCAACCGCCGCCGCGCCGACAACCGCGCCACCGTCGCTGGCATCCCCGTG
GTTTGGCTGACACTGGGCCTCGGCGTCTGGTCTCAGTTTTTCTACGTGGC
CGGCCAAGAAGTGATATCGATGAGCTTCGACAGCTATGTCCGCACCGTGC
ACCCACTGTCCTATCTCAGTCCCTTTGAACAGCTCACGGTCGCACACACG
GTGTTCGCGGTCGGCCGCTTCCTCGCCGCCTTCGTCCAATGGTTCCTCAA
ACCCCGCTGGATACTTATGCTCTCTTACATCGGCATGATCGTCTTCTCCG
TCCTGTGCATGAAAATGACCGGACGAGCCGCTGAAGCCATGGCTCTCATG
GTGTACCTGTTCGAGAGCGGCGTATTCAGTATCATTTTTGCCATCTCGCT
GCGCGGCACCGGTCGACACACCAAGACCGCGACCGTACTGCTCACGGTGG
CCATCGGCGGCGGCGCCTTCTTCCCATTCGCGCAATACGCAGCCGAGCTG
GCAGGCGGCATCCGCTATTCCTACTGCGTGCTGGTGGCGCTGTTCAGTGC
GGGCGCCATCTTCCCCATCTACCTCAACGTAGTGCCGGCAGCCAAGAAGC
AGGTGGACCCGGTACCGAACGAGCACCTGCGACATCCCCGCCGGCGCAGT
CGCATCAAAGCCAACGTCATGGCGCGCGAAAAGGAGAACCCATCGGTGGG
TGGGGTGCTCTCGCGCCGGCGCAGCGTAGTGTCGGAGCCGTTGCCGACGG
TGCAGCTGGCGGACCACACGAAGCAGACGTCGGGGGGATTGATGCATGAA
TTGGCGCCATGGCCAGAGCAGCGCGGGGAGCGTGCGGTGCAGACAGATTA
AATGGCCGTCAAAACCTCCATTCTGGTCTTCTACCTAACCCTCACCCAAG
GCGAGAAGGTCTTTCGCTTGGCCAACTACGTGACTCTCTTCGTCGTCAAT
GCCGCCGGACTCGCCTTGACCCTCGTGAATGTCTTCCAATGCCGTCCCGT
CAGCGCGGCCGTTTCCTATCCCTTTCCCGAGGGTGCCAAGTGCATCGACA
TCCTGACCCTATACCTATCCTCGTCGCCCGTCAACATTGTGACCGACTTG
GCCATTCTCTTCCTGCCCAATCCCATCCTGACGCAAATGCGACTGCCGCG
CAAGCAAAAGATCATCCTCGTCATCACCTTCAGTTTTGGTTTCTTTGTCG
CCGTCGTCGATGTCATCCGCATTGCCTACATCCAGGATGCGGCCACCTCC
CGTCAGATCGCGTTGAGAGAGGTCCATCTGCAGGATACCCCGGGTGATGA
CCTCAGCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008408KJC3_008408Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008408-T2KJC3_008408-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008408-T2.cdsKJC3_008408-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008408-T2.utr3p1KJC3_008408-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008408-T2.exon3KJC3_008408-T2.exon3Aspergillus niger KJC3exon
KJC3_008408-T2.exon2KJC3_008408-T2.exon2Aspergillus niger KJC3exon
KJC3_008408-T2.exon1KJC3_008408-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008408-T2.utr5p2KJC3_008408-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008408-T2.utr5p1KJC3_008408-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1977793..1981315 -
Powered by Drupal