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KJC3_008435-T1, KJC3_008435-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008435-T1
Unique NameKJC3_008435-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2055599..2057491-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008435-T1 ID=KJC3_008435-T1|Name=KJC3_008435-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1893bp|location=Sequence derived from alignment at ch6:2055599..2057491- (Aspergillus niger KJC3)
GCCCATTCCTCCCTCTTACTCTTCCTCACTCTTCCTCCTCGGTCGCGGTC
ATCTATGGCGTAAATTGCCACCTTCAAAGTCTGTCATTACACCCTTGCTC
GTCCCTCGTTATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTCAC
CGCATCTCCGCGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCACC
TCCGACAAAACAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCCTCCGC
GGTCGATGATCACTTCTTTTGGACATACACAGAGGAGCCGCATCGCTCCA
GGCGACAAGCCATCATCAAAGCTCACCCGGAGGTATGCACATACTCCCCC
GTGGCCTTTTCTACCAAAGATTCATTTACTGACATGACCTCCTTCGTGCT
TCCTTCAGGTTACCAAGCTCTGCGGACCAGAGCCCCTGACCAAATATGTC
GTTCTGGGCGTCGTCTCCCTTCAGATCCTCTGCGCCTACCTGCTCCGCAA
CACGTCCATGTTCGACTGGAGATTTCTCGCGACTGCATACGTGATCGGAG
CCACCTCGAACCAGAACCTCTTCCTCGCCATCCACGAGATCTCCCATAAC
CTCGCCTTCCGGTCTGCTATGGCCAACCGTCTCTTGGCCATCTTCGCCAA
TATCCCGATCGGTTTGCCCTATAGCGCTGCATTCCGGGTACGTTGGACTA
TGACATCCAGAAGCATATAAAACCAAGTATACAAGAAGCTAACTTTTCCC
GCTCCATAGCCCTACCATCTCACCCACCACAAGTCCCTCGGTGTCGCAGG
CCTAGATACCGACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGACTCCC
TTCTAGGAAAGGCATTCTTCTGCACCTTCCAGATCTTCTTCTACGCCGTC
CGCCCCATGTTCATCTACAGCCCCCCCTTCACCTCCATTCACGTCCTGAA
CCTGATCACTCAGCTCACCTTCGACTACGCTTTGACCAAGTTCTGCGGCG
GCTCCCTCCAACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAGCCGGC
TCTCTCCACCCCTGTGCCGGCCACTTCATCGCAGAGCACTACTTCTTCTC
CCGCGTCGACCACGGTACCGAGTCTATCCAAGAGCAGAAGAACAACCAGA
AGAAGTCCCACCCTCTCGACTCCCTTCCCCCACCGGAAACCTACTCCTAC
TACGGCCCCCTCAACTTCTTCACCTACAACGTGGGCCTGCATAACGAACA
CCACGACTTCCCCGCTATCCCCTGGACAAGACTGCACGAGCTCCACCGCA
TCGCTAGCGAATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGGTGTGG
GTGATCTGGACATTCATCCTGGACAAGAACGTCGGCATGTGGTGTCGGGT
TAAGCGTGCGCAGGGCGGTCGTCTCGTTGGTGGTGGTGGTGGTGGTGGTA
GCGGACGCGCAGGTGAAAGCATCTCGGCTTCGTCGGCTGGTCCGGAAGGG
GAGTCGGGAGATGGGTGGAAGGAGAGTGAGATTCAGAATTGATTTGGATT
ATCATCTGTTTTCTCTACTACGTGTTGTTGTATCATGTGTACCGTGTGGA
CGGTATCGCTTTCGTAGAACCTGTTTTGCTTCATGACCTGTGACATACTA
TACTAGAGATGATATCCCATGGCTTTATTGTTTCCACGATGAACTAACCT
GTGACTGGCTGACTGATTGACTGGGTGCTGGTGCCTGTTGATACTACGCT
GGGATGGACTAACCTTATTTGCATGACATGTCTGTTATCTACCTACCTAC
TTATCTTACAAAGTACATGTGATATAGTTGAGTATGATTAGCTTGTGTAT
AGCTACTTAGTGTGGAGAATCAATTATTGTGTTTTCATCGCCG
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Coding sequence (CDS) from alignment at ch6:2055599..2057491-

>KJC3_008435-T1 ID=KJC3_008435-T1|Name=KJC3_008435-T1|organism=Aspergillus niger KJC3|type=CDS|length=3852bp|location=Sequence derived from alignment at ch6:2055599..2057491- (Aspergillus niger KJC3)
CCCTACCATCTCACCCACCACAAGTCCCTCGGTGTCGCAGGCCTAGATAC
CGACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGACTCCCTTCTAGGAA
AGGCATTCTTCTGCACCTTCCAGATCTTCTTCTACGCCGTCCGCCCCATG
TTCATCTACAGCCCCCCCTTCACCTCCATTCACGTCCTGAACCTGATCAC
TCAGCTCACCTTCGACTACGCTTTGACCAAGTTCTGCGGCGGCTCCCTCC
AACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAGCCGGCTCTCTCCAC
CCCTGTGCCGGCCACTTCATCGCAGAGCACTACTTCTTCTCCCGCGTCGA
CCACGGTACCGAGTCTATCCAAGAGCAGAAGAACAACCAGAAGAAGTCCC
ACCCTCTCGACTCCCTTCCCCCACCGGAAACCTACTCCTACTACGGCCCC
CTCAACTTCTTCACCTACAACGTGGGCCTGCATAACGAACACCACGACTT
CCCCGCTATCCCCTGGACAAGACTGCACGAGCTCCACCGCATCGCTAGCG
AATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGGTGTGGGTGATCTGG
ACATTCATCCTGGACAAGAACGTCGGCATGTGGTGTCGGGTTAAGCGTGC
GCAGGGCGGTCGTCTCGTTGGTGGTGGTGGTGGTGGTGGTAGCGGACGCG
CAGGTGAAAGCATCTCGGCTTCGTCGGCTGGTCCGGAAGGGGAGTCGGGA
GATGGGTGGAAGGAGAGTGAGATTCAGAATTGAGTTACCAAGCTCTGCGG
ACCAGAGCCCCTGACCAAATATGTCGTTCTGGGCGTCGTCTCCCTTCAGA
TCCTCTGCGCCTACCTGCTCCGCAACACGTCCATGTTCGACTGGAGATTT
CTCGCGACTGCATACGTGATCGGAGCCACCTCGAACCAGAACCTCTTCCT
CGCCATCCACGAGATCTCCCATAACCTCGCCTTCCGGTCTGCTATGGCCA
ACCGTCTCTTGGCCATCTTCGCCAATATCCCGATCGGTTTGCCCTATAGC
GCTGCATTCCGGATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTC
ACCGCATCTCCGCGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCA
CCTCCGACAAAACAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCCTCC
GCGGTCGATGATCACTTCTTTTGGACATACACAGAGGAGCCGCATCGCTC
CAGGCGACAAGCCATCATCAAAGCTCACCCGGAGCCCTACCATCTCACCC
ACCACAAGTCCCTCGGTGTCGCAGGCCTAGATACCGACCTTCCCACCGCC
GTCGAAGCCTTCCTCCTCGACTCCCTTCTAGGAAAGGCATTCTTCTGCAC
CTTCCAGATCTTCTTCTACGCCGTCCGCCCCATGTTCATCTACAGCCCCC
CCTTCACCTCCATTCACGTCCTGAACCTGATCACTCAGCTCACCTTCGAC
TACGCTTTGACCAAGTTCTGCGGCGGCTCCCTCCAACCTCTTCTATACCT
CCTTCTGAGCTCCTTCCTAGCCGGCTCTCTCCACCCCTGTGCCGGCCACT
TCATCGCAGAGCACTACTTCTTCTCCCGCGTCGACCACGGTACCGAGTCT
ATCCAAGAGCAGAAGAACAACCAGAAGAAGTCCCACCCTCTCGACTCCCT
TCCCCCACCGGAAACCTACTCCTACTACGGCCCCCTCAACTTCTTCACCT
ACAACGTGGGCCTGCATAACGAACACCACGACTTCCCCGCTATCCCCTGG
ACAAGACTGCACGAGCTCCACCGCATCGCTAGCGAATTCTACGAGCCCCT
CCCCTGCCACCACAGCTGGGTGTGGGTGATCTGGACATTCATCCTGGACA
AGAACGTCGGCATGTGGTGTCGGGTTAAGCGTGCGCAGGGCGGTCGTCTC
GTTGGTGGTGGTGGTGGTGGTGGTAGCGGACGCGCAGGTGAAAGCATCTC
GGCTTCGTCGGCTGGTCCGGAAGGGGAGTCGGGAGATGGGTGGAAGGAGA
GTGAGATTCAGAATTGAGTTACCAAGCTCTGCGGACCAGAGCCCCTGACC
AAATATGTCGTTCTGGGCGTCGTCTCCCTTCAGATCCTCTGCGCCTACCT
GCTCCGCAACACGTCCATGTTCGACTGGAGATTTCTCGCGACTGCATACG
TGATCGGAGCCACCTCGAACCAGAACCTCTTCCTCGCCATCCACGAGATC
TCCCATAACCTCGCCTTCCGGTCTGCTATGGCCAACCGTCTCTTGGCCAT
CTTCGCCAATATCCCGATCGGTTTGCCCTATAGCGCTGCATTCCGGATGT
CTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTCACCGCATCTCCGCGTG
TCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCACCTCCGACAAAACAGA
GCCTTCTACCAGAATCGATCCTCCAGAAGCCTCCGCGGTCGATGATCACT
TCTTTTGGACATACACAGAGGAGCCGCATCGCTCCAGGCGACAAGCCATC
ATCAAAGCTCACCCGGAGCCCTACCATCTCACCCACCACAAGTCCCTCGG
TGTCGCAGGCCTAGATACCGACCTTCCCACCGCCGTCGAAGCCTTCCTCC
TCGACTCCCTTCTAGGAAAGGCATTCTTCTGCACCTTCCAGATCTTCTTC
TACGCCGTCCGCCCCATGTTCATCTACAGCCCCCCCTTCACCTCCATTCA
CGTCCTGAACCTGATCACTCAGCTCACCTTCGACTACGCTTTGACCAAGT
TCTGCGGCGGCTCCCTCCAACCTCTTCTATACCTCCTTCTGAGCTCCTTC
CTAGCCGGCTCTCTCCACCCCTGTGCCGGCCACTTCATCGCAGAGCACTA
CTTCTTCTCCCGCGTCGACCACGGTACCGAGTCTATCCAAGAGCAGAAGA
ACAACCAGAAGAAGTCCCACCCTCTCGACTCCCTTCCCCCACCGGAAACC
TACTCCTACTACGGCCCCCTCAACTTCTTCACCTACAACGTGGGCCTGCA
TAACGAACACCACGACTTCCCCGCTATCCCCTGGACAAGACTGCACGAGC
TCCACCGCATCGCTAGCGAATTCTACGAGCCCCTCCCCTGCCACCACAGC
TGGGTGTGGGTGATCTGGACATTCATCCTGGACAAGAACGTCGGCATGTG
GTGTCGGGTTAAGCGTGCGCAGGGCGGTCGTCTCGTTGGTGGTGGTGGTG
GTGGTGGTAGCGGACGCGCAGGTGAAAGCATCTCGGCTTCGTCGGCTGGT
CCGGAAGGGGAGTCGGGAGATGGGTGGAAGGAGAGTGAGATTCAGAATTG
AGTTACCAAGCTCTGCGGACCAGAGCCCCTGACCAAATATGTCGTTCTGG
GCGTCGTCTCCCTTCAGATCCTCTGCGCCTACCTGCTCCGCAACACGTCC
ATGTTCGACTGGAGATTTCTCGCGACTGCATACGTGATCGGAGCCACCTC
GAACCAGAACCTCTTCCTCGCCATCCACGAGATCTCCCATAACCTCGCCT
TCCGGTCTGCTATGGCCAACCGTCTCTTGGCCATCTTCGCCAATATCCCG
ATCGGTTTGCCCTATAGCGCTGCATTCCGGATGTCTTCGTCCGTCGTCGA
AGCCACCGCGGATGCTTCACCGCATCTCCGCGTGTCCGCATCCAAGAAGA
GCCAGGCTCCGCAAACCACCTCCGACAAAACAGAGCCTTCTACCAGAATC
GATCCTCCAGAAGCCTCCGCGGTCGATGATCACTTCTTTTGGACATACAC
AGAGGAGCCGCATCGCTCCAGGCGACAAGCCATCATCAAAGCTCACCCGG
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0042284sphingolipid delta-4 desaturase activity
Vocabulary: Biological Process
TermDefinition
GO:0030148sphingolipid biosynthetic process
GO:0006629lipid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008435KJC3_008435Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008435-T1KJC3_008435-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008435-T1.cdsKJC3_008435-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008435-T1.utr3p1KJC3_008435-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008435-T1.exon3KJC3_008435-T1.exon3Aspergillus niger KJC3exon
KJC3_008435-T1.exon2KJC3_008435-T1.exon2Aspergillus niger KJC3exon
KJC3_008435-T1.exon1KJC3_008435-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008435-T1.utr5p1KJC3_008435-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011388
DBxrefInterPro:IPR005804
DBxrefInterPro:IPR013866
DBxrefPFAM:PF08557
DBxrefPFAM:PF00487
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2055599..2057491 -
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