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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2136247..2137994- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008463-T1 ID=KJC3_008463-T1|Name=KJC3_008463-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1748bp|location=Sequence derived from alignment at ch6:2136247..2137994- (Aspergillus niger KJC3)
ATTGATTTCATGACCACCCAAAAAAGGTTGCTGTCAGTGATCCGGAAGTC
ATGAATGAATGCCCGCATTTTCACATGCCATTCCGCCGCGCACGGGCGCC
TTCGAGCTCCAGCCGAAGGTGGTTCGATCTTCTCCTCCAACCCCGACGAT
CATCACGATCTGGGTTTAATAGCCCATTGTGTCCTCTCTCCATCTTCAAC
AATCTTCTCACCTCATTTGTCTCGAATACTTCCCCGCAAAAGATCATCTG
GTGACCGTGTGGTCCTAACGCCCCCATGGATGTAAGTGTCCCTTGCCCCA
GATCCACCCACACCCACTCACTAACTGCCCATCAACATCAGTCTTCACAA
TCTCAAAGTGGATTTCGATCACGCCGTTCATATCCCACCCTACACCATGT
ATCTCTGTCTCCACTGAACCCTCGATTTCCCATCGACGACGATACGGATG
CCCCAGACTATTTCTCTCCTAGCCACGAAATCACCGGCACCCCCAGCACA
ACCAGGACCTCTTATCTCTCTAGTTTCTCCGTCCCCGGAACCCCAGGCGT
CCTATCCCACTCTCACTCCCGTAGCGGGTCCCGCGTTCGTCGCCATTCCC
GAAGCAAGAGCTCCACTCGCATCCATTCCAGCGACACCAATTTACAGTCC
CGGAGCGTGGCCAGTCCACTTCATCACCAGCAGAATGAAGAACCCCGCCG
AAGCAGAACACGCTCCTCCCGGCGTCACCCCGATGCCGTCCACCACCATC
ACAATCCAGACACAGAATGGATGCTCCGCGCAGGCATTGCCCTCGCATCC
TCGACTCGCGAAGAAAAGGGTCAAAGCTGGCTCGTTAAACGCCAAAGCTC
AACCAGCCTCGTCTCAGACAGCCATCAAATCGACCTAGACAGCCAACAGC
ATCAACAGCCATGGACCTCACGGAGCAGCACCCGCCGTTCTCAATCCGGC
ATATCCACCCCTGCTGCCTACTCTCGTCGAGCCTCCCGCTCACGCCCAAC
AAGCCGCAGATCCAGCAGACCAGACCTGGCCATGACCAGCCTCGACATAA
CCCGGTTTTCCGGCCGACGAGAGATCCCCACCACAACCAGCAGCAGTGGC
ATCCACACGCCCCTCGAAGCAGAGCAATCCCGTCACATGCTCCCCGATTT
CGTGGACGAGCGCATCCGCGCCGAGATGGCAAATATAGCCTCCGAAGAAG
ATGAAGGAGAAGAAGAAGACAACCTCAGCTTCACATCCACCTCCGACTCC
CTCCACGCCTCCGAAGACGAACTAGACGAACAAGAATTCCAGCGTCTCAC
CCGCGAACGAGGCTTCGGACTAGGCAGCTGGATCGACCGAATGGTAGAAT
GGACCTTATTCGGCGTCGACGACTGGCCACTCTCTACTACCACAACAACT
GCACCACCAGCAGTAACATCGGTGGAGACCACCGACCACGACCCTCAATC
TCTCATGCATGAGAACATCCGTTCCCAAGAGACAGACACCATATCCATAG
CGACAGAGTCAGATATCGCTTCCATAAGCGAAGAGAAACCCGGAACCCGC
GGCGGGTGGGAAGATGCCGGATGGTTGTTCAGGGTTGTGAAACGTGCATT
GTCATGAACGGGAGAAGACCACAAAGTAGAACAGTGCAATTTTACTTACT
TCCATACTTATTGTATAATTTAACCATGGGTGGATCCTCTCTCTTCTCTA
TGAGAATATAACCACTAATAGCAAGGTATATATATACATGGATAGGGT back to topCoding sequence (CDS) from alignment at ch6:2136247..2137994- >KJC3_008463-T1 ID=KJC3_008463-T1|Name=KJC3_008463-T1|organism=Aspergillus niger KJC3|type=CDS|length=2544bp|location=Sequence derived from alignment at ch6:2136247..2137994- (Aspergillus niger KJC3)
TCTTCACAATCTCAAAGTGGATTTCGATCACGCCGTTCATATCCCACCCT
ACACCATGTATCTCTGTCTCCACTGAACCCTCGATTTCCCATCGACGACG
ATACGGATGCCCCAGACTATTTCTCTCCTAGCCACGAAATCACCGGCACC
CCCAGCACAACCAGGACCTCTTATCTCTCTAGTTTCTCCGTCCCCGGAAC
CCCAGGCGTCCTATCCCACTCTCACTCCCGTAGCGGGTCCCGCGTTCGTC
GCCATTCCCGAAGCAAGAGCTCCACTCGCATCCATTCCAGCGACACCAAT
TTACAGTCCCGGAGCGTGGCCAGTCCACTTCATCACCAGCAGAATGAAGA
ACCCCGCCGAAGCAGAACACGCTCCTCCCGGCGTCACCCCGATGCCGTCC
ACCACCATCACAATCCAGACACAGAATGGATGCTCCGCGCAGGCATTGCC
CTCGCATCCTCGACTCGCGAAGAAAAGGGTCAAAGCTGGCTCGTTAAACG
CCAAAGCTCAACCAGCCTCGTCTCAGACAGCCATCAAATCGACCTAGACA
GCCAACAGCATCAACAGCCATGGACCTCACGGAGCAGCACCCGCCGTTCT
CAATCCGGCATATCCACCCCTGCTGCCTACTCTCGTCGAGCCTCCCGCTC
ACGCCCAACAAGCCGCAGATCCAGCAGACCAGACCTGGCCATGACCAGCC
TCGACATAACCCGGTTTTCCGGCCGACGAGAGATCCCCACCACAACCAGC
AGCAGTGGCATCCACACGCCCCTCGAAGCAGAGCAATCCCGTCACATGCT
CCCCGATTTCGTGGACGAGCGCATCCGCGCCGAGATGGCAAATATAGCCT
CCGAAGAAGATGAAGGAGAAGAAGAAGACAACCTCAGCTTCACATCCACC
TCCGACTCCCTCCACGCCTCCGAAGACGAACTAGACGAACAAGAATTCCA
GCGTCTCACCCGCGAACGAGGCTTCGGACTAGGCAGCTGGATCGACCGAA
TGGTAGAATGGACCTTATTCGGCGTCGACGACTGGCCACTCTCTACTACC
ACAACAACTGCACCACCAGCAGTAACATCGGTGGAGACCACCGACCACGA
CCCTCAATCTCTCATGCATGAGAACATCCGTTCCCAAGAGACAGACACCA
TATCCATAGCGACAGAGTCAGATATCGCTTCCATAAGCGAAGAGAAACCC
GGAACCCGCGGCGGGTGGGAAGATGCCGGATGGTTGTTCAGGGTTGTGAA
ACGTGCATTGTCATGAATGGATTCTTCACAATCTCAAAGTGGATTTCGAT
CACGCCGTTCATATCCCACCCTACACCATGTATCTCTGTCTCCACTGAAC
CCTCGATTTCCCATCGACGACGATACGGATGCCCCAGACTATTTCTCTCC
TAGCCACGAAATCACCGGCACCCCCAGCACAACCAGGACCTCTTATCTCT
CTAGTTTCTCCGTCCCCGGAACCCCAGGCGTCCTATCCCACTCTCACTCC
CGTAGCGGGTCCCGCGTTCGTCGCCATTCCCGAAGCAAGAGCTCCACTCG
CATCCATTCCAGCGACACCAATTTACAGTCCCGGAGCGTGGCCAGTCCAC
TTCATCACCAGCAGAATGAAGAACCCCGCCGAAGCAGAACACGCTCCTCC
CGGCGTCACCCCGATGCCGTCCACCACCATCACAATCCAGACACAGAATG
GATGCTCCGCGCAGGCATTGCCCTCGCATCCTCGACTCGCGAAGAAAAGG
GTCAAAGCTGGCTCGTTAAACGCCAAAGCTCAACCAGCCTCGTCTCAGAC
AGCCATCAAATCGACCTAGACAGCCAACAGCATCAACAGCCATGGACCTC
ACGGAGCAGCACCCGCCGTTCTCAATCCGGCATATCCACCCCTGCTGCCT
ACTCTCGTCGAGCCTCCCGCTCACGCCCAACAAGCCGCAGATCCAGCAGA
CCAGACCTGGCCATGACCAGCCTCGACATAACCCGGTTTTCCGGCCGACG
AGAGATCCCCACCACAACCAGCAGCAGTGGCATCCACACGCCCCTCGAAG
CAGAGCAATCCCGTCACATGCTCCCCGATTTCGTGGACGAGCGCATCCGC
GCCGAGATGGCAAATATAGCCTCCGAAGAAGATGAAGGAGAAGAAGAAGA
CAACCTCAGCTTCACATCCACCTCCGACTCCCTCCACGCCTCCGAAGACG
AACTAGACGAACAAGAATTCCAGCGTCTCACCCGCGAACGAGGCTTCGGA
CTAGGCAGCTGGATCGACCGAATGGTAGAATGGACCTTATTCGGCGTCGA
CGACTGGCCACTCTCTACTACCACAACAACTGCACCACCAGCAGTAACAT
CGGTGGAGACCACCGACCACGACCCTCAATCTCTCATGCATGAGAACATC
CGTTCCCAAGAGACAGACACCATATCCATAGCGACAGAGTCAGATATCGC
TTCCATAAGCGAAGAGAAACCCGGAACCCGCGGCGGGTGGGAAGATGCCG
GATGGTTGTTCAGGGTTGTGAAACGTGCATTGTCATGAATGGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008463-T1.utr3p1 | KJC3_008463-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008463-T1.utr5p1 | KJC3_008463-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025040 |
| DBxref | PFAM:PF13136 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2136247..2137994 - |
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