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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2149032..2151968- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008467-T1 ID=KJC3_008467-T1|Name=KJC3_008467-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2937bp|location=Sequence derived from alignment at ch6:2149032..2151968- (Aspergillus niger KJC3)
ACCTCGCTGTCTATCTACTGCTTCCTACGCCCTCCTCCTCCTCCCCCCTC
TCTGCCCTTTGGGACGTTCCTCGTCCTTGTCCGCGTTTTCTTTTTCAACT
GCCTCCTGCCACGCTTGAAGAGCTCTCGGGCCGTTTCCCTTCAAGCTGCT
CGAGATTTCCTCGGGACATGCAGGGCTGATCCAATGCCACGATGTCTGCC
ATCTCATGCCTCCTCCCAATAGGTACCAGAACTCGACCGACCTGCGACTT
CTCCCCTCGCAGCGGTTGGATACGAGTCTCCCCACCCGTCACACTTCGAT
GTCAAACTCCGAACCGTTCTCCTACAATGCCTCCTTCAGACGACTCAGTT
CCAGACGTGCCCGCCCTACCGCGGCGTCGTTAGCAGACCTTTTCGTCAGC
TCCCTGGTCATGGCAGGTTACTGCCATGAGCACACCCCTCGAGCCAGGGG
AATCTCTACGGTCTCCATGAAGAATCCAGGGAATAACGTCGCTCGATGGC
AGGATCGGGGGTTGACACACCGCAGGCAATTGTCGTCGAAACATCGCCTG
GACTGTCTAGGCACATCGACAGGGAGTCTGCATCGTTCAAGCGCACAACG
CATGATTAATTCCGGTGTTGCGTTGAGAGTAGAAGATGAGGATGGTGAAG
GGAACTGCTTTGCGAACAACCCGTCAGCGGGATCTTCATTCGAAGCTCGC
TACCAAGGCGCGGGCACAGAATCAACATTACAGTCACATGGAGGATTACG
AGAAACAGATCTGGAGAAGTTGAACAGCGAGCTACCAACAGCGGACGCAG
AGTCAACTAGCGAAGATAACTTGACTGCGAGCGAGAACGCCCCTGATGAG
GATAGGATTGGCCGCTTACCGGATTCGTCGAGCAAGTCGGAGAAATATCG
CCATCACAAAAGAACAAGTCCAAGCAGGAAAGCATATACATCGACTTCAC
AATTATATCGAGCTGCCTTTGGCAATACACTCAACTGGAAACAGGCAGTT
GATCTTGTTGCAAACGAGACACAGAAGGGACCACCCTCAAACGAGGTATT
TCCGGCGGTAGACAAGTCGCGGGACGCTTTGGAGTACAAAACGGTTGAGG
TATTCTTGGACGCTATGTGGAATGAGAGGATTTCAAACCATTACGTGTTT
CGACTCTACAGAGATCTTCCCTCCCCCGGGGTTGCTTACCTGTCCAAACG
CTCCCGAGGAGCACTCCTACGTCGATTTGCCGATCCTCCAGACCGTCGTT
GGGTGGATGCTCGTCGTTACCTTGCGCTGATAGAAGACATGGTCGCTGCG
AAGCTGCCCATATCCCGCTCACTCTGGAGTTCTGCTATACACCTTGCAGG
ACGGGCGTCTGGGAAGGTACGCAAGCAAGATGTGGTGAGGGCTATTGGAT
TATGGAAACAAATGGAATATCTAGCGCGTGTGAAGTCTGATGACGTCGTG
TTCACCATCCTCTTCGATATTGCCATCAAAGCGAATCAATTCACCGTCGC
GGAACGACTATTGGAGGAAATGAAGAAGCGTAATATTGAGTTCCGGCGCT
TTGGAAAGGTCTCCAAGCTCTACTATTGTGGTATGCAAGAGGATGTTGCT
GGAATCCAAGAGACATTTAACGAGTTTGTATCGAGTGGTGAGATTGTTGA
CACGGTTGTAATGAACTGCCTAATGGCGTCATTCATTCGCGCCGGGGATG
TGGACTCAGCGAAGCAGATATATGCAGAGATGCTTGAGGCCCAAGCAAAG
TCCCAAGAGACAGGGGAACTAAGCATCGAGTCGAAGCATTCAAAAACACC
GCATCTCACATCGGAGATGAACCTCTATCGGAGCCGAGTGAAGAAGCTGG
GCCGAGTCCTGCAAGAATCCACTTCACTGAAAGAAATCATGCCTGAACAC
CATCGCGCGCTTCAGCAATCGCTTCACGCAATCCCTGACACTCGGACATT
CCACATATTTCTTTCATTGCACGCTTACAAAACTGCTGATATTCATGCTT
TCATGTCTGTCCTTGCAGACATGGAGAAAGTCTTCGTGGTTCCGCCGCGT
GGTATGATATACCTCCTGCTTTTTGACGGATTCGCTCGCAACGGGCGCAA
CAAGAAAGGCTGGACGGCTGAACGGCTACGTGTAGCTTGGAGAACCTATC
TGCGTGCTCTCTACGAGTCAAGGACGAGACTTATTGAAATGTACCGCAGC
CAAAGTGGAAAGCACATCACAGAGATCCCGGTGTTAAAGGCCCCCGCCGC
GATTGAGATAGGCTGGCCAACAATTTCGCGAAAGCCAAGCGGCCTGTATA
CTCCATTGCCTTTTGCTGGCACCGATGCCAAGGAGTGGGGCGAGGCTCGA
AACGAGGAACAGAAGGTGATGGGCCAGTACGACGAGCGCAGAGGTGTCTC
CCATACCAGTGAAGGCATGGCTGCTCTCGAAGAAGACATCGATGTTGACG
AATTGTTTCGACAGCAAGCTCAGGACCTGCAAAATGAGCTGCAAAATGAG
CCGCGAGATTCGGAAGAAATCGAACGCCGGATAGAGAATGGCGTCTTTCT
TGGTCGCCGAATGGTCATTATTATTCTCCGCGCATTCGGCGCATGCTGCG
GACCAGAGGAGCTTATGAAGGTCTGGCTGCAGATTATACGGATCTGGCAG
CCGGAGAAGCGCAAGGCGCTGGACGTCCTGGCTGCCAAGGAGGAGCTAGA
GAGGCAGATGAACAGACTCCAAAGGCGATATTAGCCAATGATGGAGGTTT
AGGTGTGGGACGGTGATGCATGTACATTATAGACCTGTTATAGTAGTATA
TACCCTCAGGTTGAAGCCTGATAGCGGTTTTCAACGGCAACAGCTAATTG
CTGTCGCTTGTTATCCTGTACAGCGAACAAGCTCGTGTGTTATTAGTTTT
TCAAATGATATATCATCAGTAATGAATTCAGGAATTG back to topCoding sequence (CDS) from alignment at ch6:2149032..2151968- >KJC3_008467-T1 ID=KJC3_008467-T1|Name=KJC3_008467-T1|organism=Aspergillus niger KJC3|type=CDS|length=4890bp|location=Sequence derived from alignment at ch6:2149032..2151968- (Aspergillus niger KJC3)
CTTGGAGAACCTATCTGCGTGCTCTCTACGAGTCAAGGACGAGACTTATT
GAAATGTACCGCAGCCAAAGTGGAAAGCACATCACAGAGATCCCGGTGTT
AAAGGCCCCCGCCGCGATTGAGATAGGCTGGCCAACAATTTCGCGAAAGC
CAAGCGGCCTGTATACTCCATTGCCTTTTGCTGGCACCGATGCCAAGGAG
TGGGGCGAGGCTCGAAACGAGGAACAGAAGGTGATGGGCCAGTACGACGA
GCGCAGAGGTGTCTCCCATACCAGTGAAGGCATGGCTGCTCTCGAAGAAG
ACATCGATGTTGACGAATTGTTTCGACAGCAAGCTCAGGACCTGCAAAAT
GAGCTGCAAAATGAGCCGCGAGATTCGGAAGAAATCGAACGCCGGATAGA
GAATGGCGTCTTTCTTGGTCGCCGAATGGTCATTATTATTCTCCGCGCAT
TCGGCGCATGCTGCGGACCAGAGGAGCTTATGAAGGTCTGGCTGCAGATT
ATACGGATCTGGCAGCCGGAGAAGCGCAAGGCGCTGGACGTCCTGGCTGC
CAAGGAGGAGCTAGAGAGGCAGATGAACAGACTCCAAAGGCGATATTAGA
TGCCTCCTCCCAATAGGTACCAGAACTCGACCGACCTGCGACTTCTCCCC
TCGCAGCGGTTGGATACGAGTCTCCCCACCCGTCACACTTCGATGTCAAA
CTCCGAACCGTTCTCCTACAATGCCTCCTTCAGACGACTCAGTTCCAGAC
GTGCCCGCCCTACCGCGGCGTCGTTAGCAGACCTTTTCGTCAGCTCCCTG
GTCATGGCAGGTTACTGCCATGAGCACACCCCTCGAGCCAGGGGAATCTC
TACGGTCTCCATGAAGAATCCAGGGAATAACGTCGCTCGATGGCAGGATC
GGGGGTTGACACACCGCAGGCAATTGTCGTCGAAACATCGCCTGGACTGT
CTAGGCACATCGACAGGGAGTCTGCATCGTTCAAGCGCACAACGCATGAT
TAATTCCGGTGTTGCGTTGAGAGTAGAAGATGAGGATGGTGAAGGGAACT
GCTTTGCGAACAACCCGTCAGCGGGATCTTCATTCGAAGCTCGCTACCAA
GGCGCGGGCACAGAATCAACATTACAGTCACATGGAGGATTACGAGAAAC
AGATCTGGAGAAGTTGAACAGCGAGCTACCAACAGCGGACGCAGAGTCAA
CTAGCGAAGATAACTTGACTGCGAGCGAGAACGCCCCTGATGAGGATAGG
ATTGGCCGCTTACCGGATTCGTCGAGCAAGTCGGAGAAATATCGCCATCA
CAAAAGAACAAGTCCAAGCAGGAAAGCATATACATCGACTTCACAATTAT
ATCGAGCTGCCTTTGGCAATACACTCAACTGGAAACAGGCAGTTGATCTT
GTTGCAAACGAGACACAGAAGGGACCACCCTCAAACGAGGTATTTCCGGC
GGTAGACAAGTCGCGGGACGCTTTGGAGTACAAAACGGTTGAGGTATTCT
TGGACGCTATGTGGAATGAGAGGATTTCAAACCATTACGTGTTTCGACTC
TACAGAGATCTTCCCTCCCCCGGGGTTGCTTACCTGTCCAAACGCTCCCG
AGGAGCACTCCTACGTCGATTTGCCGATCCTCCAGACCGTCGTTGGGTGG
ATGCTCGTCGTTACCTTGCGCTGATAGAAGACATGGTCGCTGCGAAGCTG
CCCATATCCCGCTCACTCTGGAGTTCTGCTATACACCTTGCAGGACGGGC
GTCTGGGAAGGTACGCAAGCAAGATGTGGTGAGGGCTATTGGATTATGGA
AACAAATGGAATATCTAGCGCGTGTGAAGTCTGATGACGTCGTGTTCACC
ATCCTCTTCGATATTGCCATCAAAGCGAATCAATTCACCGTCGCGGAACG
ACTATTGGAGGAAATGAAGAAGCGTAATATTGAGTTCCGGCGCTTTGGAA
AGGTCTCCAAGCTCTACTATTGTGGTATGCAAGAGGATGTTGCTGGAATC
CAAGAGACATTTAACGAGTTTGTATCGAGTGGTGAGATTGTTGACACGGT
TGTAATGAACTGCCTAATGGCGTCATTCATTCGCGCCGGGGATGTGGACT
CAGCGAAGCAGATATATGCAGAGATGCTTGAGGCCCAAGCAAAGTCCCAA
GAGACAGGGGAACTAAGCATCGAGTCGAAGCATTCAAAAACACCGCATCT
CACATCGGAGATGAACCTCTATCGGAGCCGAGTGAAGAAGCTGGGCCGAG
TCCTGCAAGAATCCACTTCACTGAAAGAAATCATGCCTGAACACCATCGC
GCGCTTCAGCAATCGCTTCACGCAATCCCTGACACTCGGACATTCCACAT
ATTTCTTTCATTGCACGCTTACAAAACTGCTGATATTCATGCTTTCATGT
CTGTCCTTGCAGACATGGAGAAAGTCTTCGTGGTTCCGCCGCGTGCTTGG
AGAACCTATCTGCGTGCTCTCTACGAGTCAAGGACGAGACTTATTGAAAT
GTACCGCAGCCAAAGTGGAAAGCACATCACAGAGATCCCGGTGTTAAAGG
CCCCCGCCGCGATTGAGATAGGCTGGCCAACAATTTCGCGAAAGCCAAGC
GGCCTGTATACTCCATTGCCTTTTGCTGGCACCGATGCCAAGGAGTGGGG
CGAGGCTCGAAACGAGGAACAGAAGGTGATGGGCCAGTACGACGAGCGCA
GAGGTGTCTCCCATACCAGTGAAGGCATGGCTGCTCTCGAAGAAGACATC
GATGTTGACGAATTGTTTCGACAGCAAGCTCAGGACCTGCAAAATGAGCT
GCAAAATGAGCCGCGAGATTCGGAAGAAATCGAACGCCGGATAGAGAATG
GCGTCTTTCTTGGTCGCCGAATGGTCATTATTATTCTCCGCGCATTCGGC
GCATGCTGCGGACCAGAGGAGCTTATGAAGGTCTGGCTGCAGATTATACG
GATCTGGCAGCCGGAGAAGCGCAAGGCGCTGGACGTCCTGGCTGCCAAGG
AGGAGCTAGAGAGGCAGATGAACAGACTCCAAAGGCGATATTAGATGCCT
CCTCCCAATAGGTACCAGAACTCGACCGACCTGCGACTTCTCCCCTCGCA
GCGGTTGGATACGAGTCTCCCCACCCGTCACACTTCGATGTCAAACTCCG
AACCGTTCTCCTACAATGCCTCCTTCAGACGACTCAGTTCCAGACGTGCC
CGCCCTACCGCGGCGTCGTTAGCAGACCTTTTCGTCAGCTCCCTGGTCAT
GGCAGGTTACTGCCATGAGCACACCCCTCGAGCCAGGGGAATCTCTACGG
TCTCCATGAAGAATCCAGGGAATAACGTCGCTCGATGGCAGGATCGGGGG
TTGACACACCGCAGGCAATTGTCGTCGAAACATCGCCTGGACTGTCTAGG
CACATCGACAGGGAGTCTGCATCGTTCAAGCGCACAACGCATGATTAATT
CCGGTGTTGCGTTGAGAGTAGAAGATGAGGATGGTGAAGGGAACTGCTTT
GCGAACAACCCGTCAGCGGGATCTTCATTCGAAGCTCGCTACCAAGGCGC
GGGCACAGAATCAACATTACAGTCACATGGAGGATTACGAGAAACAGATC
TGGAGAAGTTGAACAGCGAGCTACCAACAGCGGACGCAGAGTCAACTAGC
GAAGATAACTTGACTGCGAGCGAGAACGCCCCTGATGAGGATAGGATTGG
CCGCTTACCGGATTCGTCGAGCAAGTCGGAGAAATATCGCCATCACAAAA
GAACAAGTCCAAGCAGGAAAGCATATACATCGACTTCACAATTATATCGA
GCTGCCTTTGGCAATACACTCAACTGGAAACAGGCAGTTGATCTTGTTGC
AAACGAGACACAGAAGGGACCACCCTCAAACGAGGTATTTCCGGCGGTAG
ACAAGTCGCGGGACGCTTTGGAGTACAAAACGGTTGAGGTATTCTTGGAC
GCTATGTGGAATGAGAGGATTTCAAACCATTACGTGTTTCGACTCTACAG
AGATCTTCCCTCCCCCGGGGTTGCTTACCTGTCCAAACGCTCCCGAGGAG
CACTCCTACGTCGATTTGCCGATCCTCCAGACCGTCGTTGGGTGGATGCT
CGTCGTTACCTTGCGCTGATAGAAGACATGGTCGCTGCGAAGCTGCCCAT
ATCCCGCTCACTCTGGAGTTCTGCTATACACCTTGCAGGACGGGCGTCTG
GGAAGGTACGCAAGCAAGATGTGGTGAGGGCTATTGGATTATGGAAACAA
ATGGAATATCTAGCGCGTGTGAAGTCTGATGACGTCGTGTTCACCATCCT
CTTCGATATTGCCATCAAAGCGAATCAATTCACCGTCGCGGAACGACTAT
TGGAGGAAATGAAGAAGCGTAATATTGAGTTCCGGCGCTTTGGAAAGGTC
TCCAAGCTCTACTATTGTGGTATGCAAGAGGATGTTGCTGGAATCCAAGA
GACATTTAACGAGTTTGTATCGAGTGGTGAGATTGTTGACACGGTTGTAA
TGAACTGCCTAATGGCGTCATTCATTCGCGCCGGGGATGTGGACTCAGCG
AAGCAGATATATGCAGAGATGCTTGAGGCCCAAGCAAAGTCCCAAGAGAC
AGGGGAACTAAGCATCGAGTCGAAGCATTCAAAAACACCGCATCTCACAT
CGGAGATGAACCTCTATCGGAGCCGAGTGAAGAAGCTGGGCCGAGTCCTG
CAAGAATCCACTTCACTGAAAGAAATCATGCCTGAACACCATCGCGCGCT
TCAGCAATCGCTTCACGCAATCCCTGACACTCGGACATTCCACATATTTC
TTTCATTGCACGCTTACAAAACTGCTGATATTCATGCTTTCATGTCTGTC
CTTGCAGACATGGAGAAAGTCTTCGTGGTTCCGCCGCGTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008467-T1.utr3p1 | KJC3_008467-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008467-T1.utr5p1 | KJC3_008467-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002885 |
| DBxref | InterPro:IPR011990 |
| DBxref | PFAM:PF01535 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2149032..2151968 - |
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