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KJC3_008472-T1, KJC3_008472-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008472-T1
Unique NameKJC3_008472-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2166582..2168027+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008472-T1 ID=KJC3_008472-T1|Name=KJC3_008472-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1446bp|location=Sequence derived from alignment at ch6:2166582..2168027+ (Aspergillus niger KJC3)
CATCTACATCGTTCCATTATTTGATATTATCCACTGGTCTACCCTCACCA CTATACCCACAACAGACACAATGAAACAATAATTCCTGGACAGATATCTT CATTCTATCCTATTATTTCGTATATTTATATATATACCACGCTGTCGAAT ATATCCAACCATTACCACACCGAAGTGATCATCAACAGCACAAGCAAGTT ACTAGCAACAACTCCATGAATACTAGCTACTGCTATACCAGAAGCTAGAC CAAACCACATGATCAGATAGAAAGAAAGAGAGAAAATTACAAGAATGAAA TACCCCTGGCTCCGCCCCCTCAAAGCAAAAGCCTTGCAACAAATAGCCCA GAAAACGGGGATTCAAAGCTCAGGCACCAAGGCTGTGTTGGTGGAGAGGT TAGAAGGGGAACTTACTCCTCTCTTCCCTCATATTCAGAATGACAGAGGG AAGCTGAACGAACATAAGAACGAAAAGAGAAGGAATAATGATGATAATGA TGGGATAAGAGTCCTAAGCATCGATATGGGGATTCGGAATCTGGCTTTTG CGGTGTTGCATTCTCCTTATCCTTCCTCCTCCTCTTTTTCTTCTTCGGGA TCAATATCATCTACTGGATCATCCGAGGCATATACACCCAGAGACAAAGC CAAGGAAGGGAATAGCATAACCCTCACCGCGTGGAAAAGACTCTCCATTC CTGATCTGTGCTATGCGCAACTTGAAGGAACCCCATCCCTCATCACCACC ACTACCAAACCCAAGTCACAAGTCACAGAAGAAGCTAAAGAAGACTTTTC CCCCTCCCTCTACGCCCGCCACGCATACACCCTCATCACGACCCTCCTGT CCACGTATAACCCCACCCACATCCTGATCGAAAGACAGCGGTTCCGCACG GGAGGCGGGTCCGCGGTCCAGGAGTGGACGATCCGCGTGGGTGTTTTGGA GGGGATGTTGTATGCTGTTTTGGAGACGATTAATTCGTCCCTTTTATCTT CTTCTTCTTTTTCTTCTGGTGGTAAGGTGCAGGTGTATCCTGTTGAGCCT GGGAGGGTGAGTCGGTTTTGGGGGGAGGAATCTGGGGATATTGGTGATGG GGGTGGAGATATGGTGGTGAAGAAGCAGAAGAAGAGGAAGAATGTGAGGG ATGTGAAGAAGATGAAGATTGCGTTGGTGAGGGAGTGGTTGGTGTCTGCT GCGAATGACGATGGGGATGGGAGGGTAGTGCTTGGTGGTAGTGCTGGGGA GGGGGATGAGGTGAGGGAGTTGGCGAGTGCGTTTCTGGAAAAGTGTGAAG GGAAGAGACGGACCAAGAAGGGGGAAGATGGTGTGGATATTGGCAAATTG GATGATTTGGCGGATTGTCTTGTGCAGGGGGTTACTTGGTTGGAGTGGCA GAGGATGAGGGAGAAGATTGTTACGGAGGGGGGGATTAATTTATAA
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Coding sequence (CDS) from alignment at ch6:2166582..2168027+

>KJC3_008472-T1 ID=KJC3_008472-T1|Name=KJC3_008472-T1|organism=Aspergillus niger KJC3|type=CDS|length=1152bp|location=Sequence derived from alignment at ch6:2166582..2168027+ (Aspergillus niger KJC3)
ATGAAATACCCCTGGCTCCGCCCCCTCAAAGCAAAAGCCTTGCAACAAAT
AGCCCAGAAAACGGGGATTCAAAGCTCAGGCACCAAGGCTGTGTTGGTGG
AGAGGTTAGAAGGGGAACTTACTCCTCTCTTCCCTCATATTCAGAATGAC
AGAGGGAAGCTGAACGAACATAAGAACGAAAAGAGAAGGAATAATGATGA
TAATGATGGGATAAGAGTCCTAAGCATCGATATGGGGATTCGGAATCTGG
CTTTTGCGGTGTTGCATTCTCCTTATCCTTCCTCCTCCTCTTTTTCTTCT
TCGGGATCAATATCATCTACTGGATCATCCGAGGCATATACACCCAGAGA
CAAAGCCAAGGAAGGGAATAGCATAACCCTCACCGCGTGGAAAAGACTCT
CCATTCCTGATCTGTGCTATGCGCAACTTGAAGGAACCCCATCCCTCATC
ACCACCACTACCAAACCCAAGTCACAAGTCACAGAAGAAGCTAAAGAAGA
CTTTTCCCCCTCCCTCTACGCCCGCCACGCATACACCCTCATCACGACCC
TCCTGTCCACGTATAACCCCACCCACATCCTGATCGAAAGACAGCGGTTC
CGCACGGGAGGCGGGTCCGCGGTCCAGGAGTGGACGATCCGCGTGGGTGT
TTTGGAGGGGATGTTGTATGCTGTTTTGGAGACGATTAATTCGTCCCTTT
TATCTTCTTCTTCTTTTTCTTCTGGTGGTAAGGTGCAGGTGTATCCTGTT
GAGCCTGGGAGGGTGAGTCGGTTTTGGGGGGAGGAATCTGGGGATATTGG
TGATGGGGGTGGAGATATGGTGGTGAAGAAGCAGAAGAAGAGGAAGAATG
TGAGGGATGTGAAGAAGATGAAGATTGCGTTGGTGAGGGAGTGGTTGGTG
TCTGCTGCGAATGACGATGGGGATGGGAGGGTAGTGCTTGGTGGTAGTGC
TGGGGAGGGGGATGAGGTGAGGGAGTTGGCGAGTGCGTTTCTGGAAAAGT
GTGAAGGGAAGAGACGGACCAAGAAGGGGGAAGATGGTGTGGATATTGGC
AAATTGGATGATTTGGCGGATTGTCTTGTGCAGGGGGTTACTTGGTTGGA
GTGGCAGAGGATGAGGGAGAAGATTGTTACGGAGGGGGGGATTAATTTAT
AA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008472KJC3_008472Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008472-T1.utr5p1KJC3_008472-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008472-T1.exon1KJC3_008472-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008472-T1.cdsKJC3_008472-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008472-T1KJC3_008472-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR015242
DBxrefInterPro:IPR003034
DBxrefPFAM:PF09159
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2166582..2168027 +