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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2185923..2189386+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008480-T1 ID=KJC3_008480-T1|Name=KJC3_008480-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3464bp|location=Sequence derived from alignment at ch6:2185923..2189386+ (Aspergillus niger KJC3)
CCTCTGCCTGCCTTCCGGGATCGGCCCCCATTAAGGTTCTGGCTGGTGGG
TTGCCAGGCTGATACGAGCTGGTTAGCCACGCCCATTACCTACGCAGTTC
CAAGTCTTCTACTGCTGCCCATACAGTCGAGACTGGCTTCTGCCCACGAT
GGAGCCGATTCGGACCTGCAAAATGGATCTGCGCTGAGACCCATTGGCCG
CATCGGCTGACTTCCAGCGTTGCTGCACGAGGTGGCCACTAGGCCTATCA
GCGTGGGCAATTACCCAAATCTGAGGTGAGATCCACCCATTCGCCGCTAG
AGCTTGCCATAGTCCATGGGTCAAGATACGCAGTACGCAGCTAGAAGCTG
ACCTTACCGTCTACTAACTAGTCGATGGCTGTCGATAAATTGATTCATCT
TTGATGGAAAGAGCCAGAATCACCCTTCCTCGCCCGAAACTCGGGATCCG
TCTCACTTCACCGAGTACTACGATAGTATTCTACTAGTGACTCACTCGAA
AGACAGCTCGGACTTTGTGTCGAGTCACAATGCTTGGGAGCGTGTTACCA
GTTCTTGTTCTGAAGTACTAACTCGGCTTTTGAACATGATGTTCGGAAAA
CCTTTCGGGATGCGGAGTATCTTGCGTGCAGGTCCGGGGAAGCTCATCTC
ATCTGGCCGACGAACGGTTACCGCAGAGCATGCTATAGATACAGTTCCAA
TGCCCCCGTAGATCCGATGGCAACCACGATGCTCGCCCAGAGATCAATGT
TTTGGTTGAACTGCTCCTTTCAGTGTAGTCGCAGCTTCCATTCCTGTATG
TTGCATAAGCTCGAAGAAGGCAGTTGCACAAACATGCTCCGTCTGGACGG
ACTGCCCACCATAATGAATACAACAAATCTGTCCATTTATTTACTACGGC
ATTATCGCTCACCTTGAGGCAATACTCCTGCCTCGATGGCGTTCTTCCTC
ATCTGTCCCCGTTTCAGAAAATACTGGAAAGGCTCAGACTCGGACACAAG
ACACTCTTACAAGTTAGATCCGGCTAAACCGTCGCCAGATGGCAATCTAG
ATGGTAGGCCGCTCGAGTCCGCTCGATTGACAGCGGTTTTGCTGACCCTG
CTAGGGCATTCCAAAGACAGAGAAGATGTCGCACGCCCTGGTCATCCCAG
ACGCTCCTCCGGTGGCTTGCCCGATAGACTTCGTAGACGTTTCTCCCGAG
AAGCCAGAGACCAGCGTGTAAAGCCAAAGAATGATCGCAGAAAGTCTGGC
TCCCCTGCCTTTCCATTCTCTTCTAGATTTGCCAGTCCTAGGGAAAGAGT
AGCCACTCCAGATGAGATTGGGAGCAGCTTCATGAGTGAAAGAGGATATG
ACAGCGACGCGCAGTTTATAAGCACTCCCAAGCAGGTTAGCCACACCAGA
GACCATCCTTCTAATCCACGCATCCTTGAGGATGCTGCTGTCTCTCCTTT
GAGGCGCGAGATGGCCCAGGGAATGCCATATGTGCAAGCCCATGGTCAAG
ACCTCGAAGAGCTGGAGAGTGCACCATATGCGGACCCTGCTCTAAGGGAA
GAATCGCAATCTGCTCTCCGTTCGAAAAGCCAGGCGTCTTGCATGACCCA
ATCTTCCCAGGTCTCCTCCGTCTTCCGTGGCACAGATGATGGGAGCCGTC
GAGTCAGGGTTGCAAGGCCTCAAAGAGGCATGGCGGGCAGTCCAGTTCAA
GGCAAGATAAGAAATGGACTTGCGTATCCAAAACAACCAGGATACCGGCC
TCCCCTTCGAGCGGCTTCGCCTGATCCTGGTATACATGGCTCGGGTTATT
CGAGTCCAGTATCTCCTGTGCCATTCTCGTATACCACTTCTGCTGACTCT
CTGGTTGGGCCATCGCAGATCTCGGTCAGGAAACGACGCCGGCAACCCGC
CGTGGGCCCTATACCAGACAAATGCTCTGTTCATCTTGGTGACTCAAATA
TCCCGACGACCTTGGCGGCCCGCTCAACGTCTCCTCATATGCTCTCTCCG
AAACAATCATTCGATGAAAACCGGTGGACCAACAATACCGGGACGTGGAA
CGCACCCCAGCCCTTTCACGACTTCTCTGGGTTTGGAGCAGGAAAAGCAC
CAGATACTTACGCAACAGGGCCAAGACCTAGAGGTCCGGTGAACCAGGCG
TCCTCGTGCTATTCTCAGAAGACCAGCCCGTCACCTACAGGTGATCCGGT
CGGCTCTATAGATAGACGGATCCAGGGTCAGGCTATCACTATACAGCCTC
AAGAACCCAATGCTTCTTTTAGTTATTCCCCTCGATCATTGAAGTCGTCC
CTGGTGAATGCTCATTATGCTCCCATTGCAGACCATGATGCGGATAAAGC
TGAAGCACAGAAAAGCAGGTTTGCCGAGGGATTCGAGTCAGCCCGGTCAA
TCAGCTCTCCTGCACATGGCCATAACGACGCGGATGCGGACCTTGCATCG
CCTCGCAAGGTGAGCGTTGGATGGATGTCGGGAGGCCGGCGACTTGGATA
CGGATACGCTCTGGTTCCTGCAAATGACGGAGCCGATGAACCTCCAAAAA
GTCTCAATCACTTTGGTTCCAGTGTTCCAGAAGCGACAGCTGTAGGTGTG
AATCTTCGAAGTGGATTATCAAGGTCCTTTGAGAAGGAGACTATAGGACA
CAACAAAAAAACGTCCCCTAGAGCCGGTAATCCCAGCTTCGAGCTATCGA
GCGTTGTGAGTCGCATACGTCTTCGCAGCTTCTCTAGCGCGTTTAACGAA
GGCTTGGGTGAACAGCTCAAATCCTCAGTGCTAGAGAAATTCTCCAAGCG
AAAGAAGGAGCAGGTCGATCCGGTTGCAGACAATATTGCTAAGAATCCCT
GGGACTTTTGCTCTTGGGTAGACCCAAACCAGCCTTCGAGCGATCAACAG
AGTGGACAGAAAAGCTCGTCAGTCTCGACCAAAAGTACCGAGGGGCGGCC
TTTGGGTAGATGGGCGACGTTGCGTCGTACAGGGAGTTTGTTGACCAAGG
GCCGCAGCGTGTCGGCGATTACGCGCGGACTTGAATCCAACTTGACTGCG
AGGATGACCAGTCCAGCCGGGCGATACCCTGTGGCACGAAGAAAGGAGGG
CCGCGTCCTCAAGTTCAAGGTCCTCGACCGTAAAAATAGGGCTAATAGTG
CCGATGATGACATGCCTATTGTCTCCGCCGAAAACTTGCATGGAACAGCC
GGCTTAGATGGTTTTCAGAACAAGGGGCAGGAACACGACCAACAGACTGT
TCAGACAGGCACTCACAGGACGAAAAGGGAGCGGCATAATTCTTCTGACA
AGACCGGTTCGGAGTCGATCACAGATGATTGGAAAAGCACCTACCAGGAC
TGCCAAGAAATGCTTGGGTAGGCCTGTGCTTTGGTCGTTTATATATCTTT
GATGCCGTCGGAGCACACTCAGCATTGGCAATCTCCTACAACAACGCCAT
TAATGTAACATGAC back to topCoding sequence (CDS) from alignment at ch6:2185923..2189386+ >KJC3_008480-T1 ID=KJC3_008480-T1|Name=KJC3_008480-T1|organism=Aspergillus niger KJC3|type=CDS|length=4770bp|location=Sequence derived from alignment at ch6:2185923..2189386+ (Aspergillus niger KJC3)
ATGGCGTTCTTCCTCATCTGTCCCCGTTTCAGAAAATACTGGAAAGGCTC
AGACTCGGACACAAGACACTCTTACAAGTTAGATCCGGCTAAACCGTCGC
CAGATGGCAATCTAGATGGGCATTCCAAAGACAGAGAAGATGTCGCACGC
CCTGGTCATCCCAGACGCTCCTCCGGTGGCTTGCCCGATAGACTTCGTAG
ACGTTTCTCCCGAGAAGCCAGAGACCAGCGTGTAAAGCCAAAGAATGATC
GCAGAAAGTCTGGCTCCCCTGCCTTTCCATTCTCTTCTAGATTTGCCAGT
CCTAGGGAAAGAGTAGCCACTCCAGATGAGATTGGGAGCAGCTTCATGAG
TGAAAGAGGATATGACAGCGACGCGCAGTTTATAAGCACTCCCAAGCAGG
TTAGCCACACCAGAGACCATCCTTCTAATCCACGCATCCTTGAGGATGCT
GCTGTCTCTCCTTTGAGGCGCGAGATGGCCCAGGGAATGCCATATGTGCA
AGCCCATGGTCAAGACCTCGAAGAGCTGGAGAGTGCACCATATGCGGACC
CTGCTCTAAGGGAAGAATCGCAATCTGCTCTCCGTTCGAAAAGCCAGGCG
TCTTGCATGACCCAATCTTCCCAGGTCTCCTCCGTCTTCCGTGGCACAGA
TGATGGGAGCCGTCGAGTCAGGGTTGCAAGGCCTCAAAGAGGCATGGCGG
GCAGTCCAGTTCAAGGCAAGATAAGAAATGGACTTGCGTATCCAAAACAA
CCAGGATACCGGCCTCCCCTTCGAGCGGCTTCGCCTGATCCTGGTATACA
TGGCTCGGGTTATTCGAGTCCAGTATCTCCTGTGCCATTCTCGTATACCA
CTTCTGCTGACTCTCTGGTTGGGCCATCGCAGATCTCGGTCAGGAAACGA
CGCCGGCAACCCGCCGTGGGCCCTATACCAGACAAATGCTCTGTTCATCT
TGGTGACTCAAATATCCCGACGACCTTGGCGGCCCGCTCAACGTCTCCTC
ATATGCTCTCTCCGAAACAATCATTCGATGAAAACCGGTGGACCAACAAT
ACCGGGACGTGGAACGCACCCCAGCCCTTTCACGACTTCTCTGGGTTTGG
AGCAGGAAAAGCACCAGATACTTACGCAACAGGGCCAAGACCTAGAGGTC
CGGTGAACCAGGCGTCCTCGTGCTATTCTCAGAAGACCAGCCCGTCACCT
ACAGGTGATCCGGTCGGCTCTATAGATAGACGGATCCAGGGTCAGGCTAT
CACTATACAGCCTCAAGAACCCAATGCTTCTTTTAGTTATTCCCCTCGAT
CATTGAAGTCGTCCCTGGTGAATGCTCATTATGCTCCCATTGCAGACCAT
GATGCGGATAAAGCTGAAGCACAGAAAAGCAGGTTTGCCGAGGGATTCGA
GTCAGCCCGGTCAATCAGCTCTCCTGCACATGGCCATAACGACGCGGATG
CGGACCTTGCATCGCCTCGCAAGGTGAGCGTTGGATGGATGTCGGGAGGC
CGGCGACTTGGATACGGATACGCTCTGGTTCCTGCAAATGACGGAGCCGA
TGAACCTCCAAAAAGTCTCAATCACTTTGGTTCCAGTGTTCCAGAAGCGA
CAGCTGTAGGTGTGAATCTTCGAAGTGGATTATCAAGGTCCTTTGAGAAG
GAGACTATAGGACACAACAAAAAAACGTCCCCTAGAGCCGGTAATCCCAG
CTTCGAGCTATCGAGCGTTGTGAGTCGCATACGTCTTCGCAGCTTCTCTA
GCGCGTTTAACGAAGGCTTGGGTGAACAGCTCAAATCCTCAGTGCTAGAG
AAATTCTCCAAGCGAAAGAAGGAGCAGGTCGATCCGGTTGCAGACAATAT
TGCTAAGAATCCCTGGGACTTTTGCTCTTGGGTAGACCCAAACCAGCCTT
CGAGCGATCAACAGAGTGGACAGAAAAGCTCGTCAGTCTCGACCAAAAGT
ACCGAGGGGCGGCCTTTGGGTAGATGGGCGACGTTGCGTCGTACAGGGAG
TTTGTTGACCAAGGGCCGCAGCGTGTCGGCGATTACGCGCGGACTTGAAT
CCAACTTGACTGCGAGGATGACCAGTCCAGCCGGGCGATACCCTGTGGCA
CGAAGAAAGGAGGGCCGCGTCCTCAAGTTCAAGGTCCTCGACCGTAAAAA
TAGGGCTAATAGTGCCGATGATGACATGCCTATTGTCTCCGCCGAAAACT
TGCATGGAACAGCCGGCTTAGATGGTTTTCAGAACAAGGGGCAGGAACAC
GACCAACAGACTGTTCAGACAGGCACTCACAGGACGAAAAGGGAGCGGCA
TAATTCTTCTGACAAGACCGGTTCGGAGTCGATCACAGATGATTGGAAAA
GCACCTACCAGGACTGCCAAGAAATGCTTGGGTAGATGGCGTTCTTCCTC
ATCTGTCCCCGTTTCAGAAAATACTGGAAAGGCTCAGACTCGGACACAAG
ACACTCTTACAAGTTAGATCCGGCTAAACCGTCGCCAGATGGCAATCTAG
ATGGGCATTCCAAAGACAGAGAAGATGTCGCACGCCCTGGTCATCCCAGA
CGCTCCTCCGGTGGCTTGCCCGATAGACTTCGTAGACGTTTCTCCCGAGA
AGCCAGAGACCAGCGTGTAAAGCCAAAGAATGATCGCAGAAAGTCTGGCT
CCCCTGCCTTTCCATTCTCTTCTAGATTTGCCAGTCCTAGGGAAAGAGTA
GCCACTCCAGATGAGATTGGGAGCAGCTTCATGAGTGAAAGAGGATATGA
CAGCGACGCGCAGTTTATAAGCACTCCCAAGCAGGTTAGCCACACCAGAG
ACCATCCTTCTAATCCACGCATCCTTGAGGATGCTGCTGTCTCTCCTTTG
AGGCGCGAGATGGCCCAGGGAATGCCATATGTGCAAGCCCATGGTCAAGA
CCTCGAAGAGCTGGAGAGTGCACCATATGCGGACCCTGCTCTAAGGGAAG
AATCGCAATCTGCTCTCCGTTCGAAAAGCCAGGCGTCTTGCATGACCCAA
TCTTCCCAGGTCTCCTCCGTCTTCCGTGGCACAGATGATGGGAGCCGTCG
AGTCAGGGTTGCAAGGCCTCAAAGAGGCATGGCGGGCAGTCCAGTTCAAG
GCAAGATAAGAAATGGACTTGCGTATCCAAAACAACCAGGATACCGGCCT
CCCCTTCGAGCGGCTTCGCCTGATCCTGGTATACATGGCTCGGGTTATTC
GAGTCCAGTATCTCCTGTGCCATTCTCGTATACCACTTCTGCTGACTCTC
TGGTTGGGCCATCGCAGATCTCGGTCAGGAAACGACGCCGGCAACCCGCC
GTGGGCCCTATACCAGACAAATGCTCTGTTCATCTTGGTGACTCAAATAT
CCCGACGACCTTGGCGGCCCGCTCAACGTCTCCTCATATGCTCTCTCCGA
AACAATCATTCGATGAAAACCGGTGGACCAACAATACCGGGACGTGGAAC
GCACCCCAGCCCTTTCACGACTTCTCTGGGTTTGGAGCAGGAAAAGCACC
AGATACTTACGCAACAGGGCCAAGACCTAGAGGTCCGGTGAACCAGGCGT
CCTCGTGCTATTCTCAGAAGACCAGCCCGTCACCTACAGGTGATCCGGTC
GGCTCTATAGATAGACGGATCCAGGGTCAGGCTATCACTATACAGCCTCA
AGAACCCAATGCTTCTTTTAGTTATTCCCCTCGATCATTGAAGTCGTCCC
TGGTGAATGCTCATTATGCTCCCATTGCAGACCATGATGCGGATAAAGCT
GAAGCACAGAAAAGCAGGTTTGCCGAGGGATTCGAGTCAGCCCGGTCAAT
CAGCTCTCCTGCACATGGCCATAACGACGCGGATGCGGACCTTGCATCGC
CTCGCAAGGTGAGCGTTGGATGGATGTCGGGAGGCCGGCGACTTGGATAC
GGATACGCTCTGGTTCCTGCAAATGACGGAGCCGATGAACCTCCAAAAAG
TCTCAATCACTTTGGTTCCAGTGTTCCAGAAGCGACAGCTGTAGGTGTGA
ATCTTCGAAGTGGATTATCAAGGTCCTTTGAGAAGGAGACTATAGGACAC
AACAAAAAAACGTCCCCTAGAGCCGGTAATCCCAGCTTCGAGCTATCGAG
CGTTGTGAGTCGCATACGTCTTCGCAGCTTCTCTAGCGCGTTTAACGAAG
GCTTGGGTGAACAGCTCAAATCCTCAGTGCTAGAGAAATTCTCCAAGCGA
AAGAAGGAGCAGGTCGATCCGGTTGCAGACAATATTGCTAAGAATCCCTG
GGACTTTTGCTCTTGGGTAGACCCAAACCAGCCTTCGAGCGATCAACAGA
GTGGACAGAAAAGCTCGTCAGTCTCGACCAAAAGTACCGAGGGGCGGCCT
TTGGGTAGATGGGCGACGTTGCGTCGTACAGGGAGTTTGTTGACCAAGGG
CCGCAGCGTGTCGGCGATTACGCGCGGACTTGAATCCAACTTGACTGCGA
GGATGACCAGTCCAGCCGGGCGATACCCTGTGGCACGAAGAAAGGAGGGC
CGCGTCCTCAAGTTCAAGGTCCTCGACCGTAAAAATAGGGCTAATAGTGC
CGATGATGACATGCCTATTGTCTCCGCCGAAAACTTGCATGGAACAGCCG
GCTTAGATGGTTTTCAGAACAAGGGGCAGGAACACGACCAACAGACTGTT
CAGACAGGCACTCACAGGACGAAAAGGGAGCGGCATAATTCTTCTGACAA
GACCGGTTCGGAGTCGATCACAGATGATTGGAAAAGCACCTACCAGGACT
GCCAAGAAATGCTTGGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008480-T1.utr3p1 | KJC3_008480-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2185923..2189386 + |
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