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KJC3_008488-T1, KJC3_008488-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008488-T1
Unique NameKJC3_008488-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2202064..2203999+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008488-T1 ID=KJC3_008488-T1|Name=KJC3_008488-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1936bp|location=Sequence derived from alignment at ch6:2202064..2203999+ (Aspergillus niger KJC3)
CCTCCCCATTTCCTTCTCTCTCTCTACTGGCCTAGACTTTGATTAGTGGA
ATCCAAATAGATAAGCCGGTTACACAGTCGCTTACTGCTACAGAAAAAGT
TAGTCGACGGCTATTCTCTCTGTCCTATCTTGAACCTCATCTTCCCCGCC
CCGCAACGCCAAACTCTCTCAAATCATGAGCTCTCATGTCGTGGTTCTTG
ATGCAACAGCCCGGCGAGCTACTATCAAGACGACACCTGGGAAACATCTA
ACTGATGTTCTACACGAAGCTTGTACAAAGCTAGGTGTGGATGCCAGCCA
ATATGGGCTAAAGTAAGGTTCGACTATGCCCATCCTACGAAGTTCACAAG
ACTGACGGCTTTTGTCAAGGTACAAAGGTAAAGAGCTCGATCTTTCACTG
GTATTTCGCCTCTCTGGGCTCACCTCCGGCGCAAAGCTGGAGTTGGTTCA
GCTCTCCCGTTCGCCCTCCGTCGTCACCGTCGCTCTACAACTGCCCGAAT
CTGAAGCACGAGGGGCGCCTCCAAACAGACGACTTTTGGATAAATTCCCC
AGCACGACAACGATATGGCTAGTATTGCGCAAATTCGAGGCTGGAGTTGC
TGGAGGTGCTCCGACCCGGAATATAACTGGAAGGGGTGTCCCTAGTGGCA
ATGAAGGCGCAGGGAGACTGTACTACGAAACTCCGGTCGTCCAGATTATG
GAACGGGAACTCTCCTCGTTCACTGATCTGCAGAAATCTTTGGCACAGCT
GGGATTCAACAACGGAAATGTGCTGCTGAGGCTGAGCTTTCGTCGTACAG
AGGAACCTTTGGAGGAGGCTATGGTCAAGATTCAGGAGTACTTCAAACCG
TTCGACGACGCGACCCCCAAGGCCGAAGAACCGCCTGCACCTACAGAGCA
ACCACCACAGGCCGATGCATCCAACAAACAAGAGGGGGCACAGCAACAGC
CCGCATCTACTTCCGAGGCACCTTCTACCGCGGAACAAACCCCGCCAACT
GCTCCTACATCCAATGCGCCTGCTGCAGAGCCCACCGAAGTACCAGCTGG
GTTCTCTCGACCCATAACCGTATTCTCTCCCCCTTCCAACACTACACCAC
AGTCCGCACAAACGAACTACAACGAGACCGACTACATCCCATCCATCGAA
CACGCACAAGCACATCAGCGACGACTTAATGCAACCTCCCGACCCCAACG
CCTTCCCACGGACGCCGAAATCGCCGCCAAAGCAGCCGCAGAAGAGGAAC
GGCTCGCCGCAGTCACTCAAGTAGACGTCAAGGTGCGCCTACCAGACCAA
AGCCAAGTCGTGGCCAAGTTCGGACAAGAAGACACGGCCAAATCACTCTA
CGACTTTGTCCGAAACTGTCTTGCCGCGCCATTCGCCAGCGAGAAATTTA
TCATCACGTCCTCCCTCCCCAAGACATCTAGCGGAGGACAACCGGGGAGA
CATATCCAAAACGTCGTTCCCGACTCAGACCAACAGCTGCTGATCAAGGA
TCTAGCCATGATCGGTCGTGTGCTAGTCAACTTCACTTGGGATGCGAACG
CATCCCCTGCCGCCCGGCAAAGCCGGGAACTCTTGAAACCCGAACTACGG
ACACGCGCGCAGGAACTCAAGGTTGAACAGCCCAAGGACGTAACAGATAA
CTCGGAAGTGAGCAGGCCGAAGCCGACAAGCACCGGGGATGAAACTCGCG
GCGAGAAGCGGAAGCCAGGCGGCATGCCCAAATGGTTGAAACTACCAGGC
AAGAAATGAAAGATATAGTAGCAGATAGATAGTGAATAGTTATGATTGAT
GCCAACAATAACCTAAACCCCTATGGGAGTACACAGATGATAGTCTTATA
GCTGTCTAGTACTAACTAATAGTTCCGTACGTTCCTCTATGGATAGATAG
TGAAGGTCCTTACGGCGTTTATCCGTCCCACTCGAC
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Coding sequence (CDS) from alignment at ch6:2202064..2203999+

>KJC3_008488-T1 ID=KJC3_008488-T1|Name=KJC3_008488-T1|organism=Aspergillus niger KJC3|type=CDS|length=3054bp|location=Sequence derived from alignment at ch6:2202064..2203999+ (Aspergillus niger KJC3)
ATGAGCTCTCATGTCGTGGTTCTTGATGCAACAGCCCGGCGAGCTACTAT
CAAGACGACACCTGGGAAACATCTAACTGATGTTCTACACGAAGCTTGTA
CAAAGCTAGGTGTGGATGCCAGCCAATATGGGCTAAAGTACAAAGGTAAA
GAGCTCGATCTTTCACTGGTATTTCGCCTCTCTGGGCTCACCTCCGGCGC
AAAGCTGGAGTTGGTTCAGCTCTCCCGTTCGCCCTCCGTCGTCACCGTCG
CTCTACAACTGCCCGAATCTGAAGCACGAGGGGCGCCTCCAAACAGACGA
CTTTTGGATAAATTCCCCAGCACGACAACGATATGGCTAGTATTGCGCAA
ATTCGAGGCTGGAGTTGCTGGAGGTGCTCCGACCCGGAATATAACTGGAA
GGGGTGTCCCTAGTGGCAATGAAGGCGCAGGGAGACTGTACTACGAAACT
CCGGTCGTCCAGATTATGGAACGGGAACTCTCCTCGTTCACTGATCTGCA
GAAATCTTTGGCACAGCTGGGATTCAACAACGGAAATGTGCTGCTGAGGC
TGAGCTTTCGTCGTACAGAGGAACCTTTGGAGGAGGCTATGGTCAAGATT
CAGGAGTACTTCAAACCGTTCGACGACGCGACCCCCAAGGCCGAAGAACC
GCCTGCACCTACAGAGCAACCACCACAGGCCGATGCATCCAACAAACAAG
AGGGGGCACAGCAACAGCCCGCATCTACTTCCGAGGCACCTTCTACCGCG
GAACAAACCCCGCCAACTGCTCCTACATCCAATGCGCCTGCTGCAGAGCC
CACCGAAGTACCAGCTGGGTTCTCTCGACCCATAACCGTATTCTCTCCCC
CTTCCAACACTACACCACAGTCCGCACAAACGAACTACAACGAGACCGAC
TACATCCCATCCATCGAACACGCACAAGCACATCAGCGACGACTTAATGC
AACCTCCCGACCCCAACGCCTTCCCACGGACGCCGAAATCGCCGCCAAAG
CAGCCGCAGAAGAGGAACGGCTCGCCGCAGTCACTCAAGTAGACGTCAAG
GTGCGCCTACCAGACCAAAGCCAAGTCGTGGCCAAGTTCGGACAAGAAGA
CACGGCCAAATCACTCTACGACTTTGTCCGAAACTGTCTTGCCGCGCCAT
TCGCCAGCGAGAAATTTATCATCACGTCCTCCCTCCCCAAGACATCTAGC
GGAGGACAACCGGGGAGACATATCCAAAACGTCGTTCCCGACTCAGACCA
ACAGCTGCTGATCAAGGATCTAGCCATGATCGGTCGTGTGCTAGTCAACT
TCACTTGGGATGCGAACGCATCCCCTGCCGCCCGGCAAAGCCGGGAACTC
TTGAAACCCGAACTACGGACACGCGCGCAGGAACTCAAGGTTGAACAGCC
CAAGGACGTAACAGATAACTCGGAAGTGAGCAGGCCGAAGCCGACAAGCA
CCGGGGATGAAACTCGCGGCGAGAAGCGGAAGCCAGGCGGCATGCCCAAA
TGGTTGAAACTACCAGGCAAGAAATGAATGAGCTCTCATGTCGTGGTTCT
TGATGCAACAGCCCGGCGAGCTACTATCAAGACGACACCTGGGAAACATC
TAACTGATGTTCTACACGAAGCTTGTACAAAGCTAGGTGTGGATGCCAGC
CAATATGGGCTAAAGTACAAAGGTAAAGAGCTCGATCTTTCACTGGTATT
TCGCCTCTCTGGGCTCACCTCCGGCGCAAAGCTGGAGTTGGTTCAGCTCT
CCCGTTCGCCCTCCGTCGTCACCGTCGCTCTACAACTGCCCGAATCTGAA
GCACGAGGGGCGCCTCCAAACAGACGACTTTTGGATAAATTCCCCAGCAC
GACAACGATATGGCTAGTATTGCGCAAATTCGAGGCTGGAGTTGCTGGAG
GTGCTCCGACCCGGAATATAACTGGAAGGGGTGTCCCTAGTGGCAATGAA
GGCGCAGGGAGACTGTACTACGAAACTCCGGTCGTCCAGATTATGGAACG
GGAACTCTCCTCGTTCACTGATCTGCAGAAATCTTTGGCACAGCTGGGAT
TCAACAACGGAAATGTGCTGCTGAGGCTGAGCTTTCGTCGTACAGAGGAA
CCTTTGGAGGAGGCTATGGTCAAGATTCAGGAGTACTTCAAACCGTTCGA
CGACGCGACCCCCAAGGCCGAAGAACCGCCTGCACCTACAGAGCAACCAC
CACAGGCCGATGCATCCAACAAACAAGAGGGGGCACAGCAACAGCCCGCA
TCTACTTCCGAGGCACCTTCTACCGCGGAACAAACCCCGCCAACTGCTCC
TACATCCAATGCGCCTGCTGCAGAGCCCACCGAAGTACCAGCTGGGTTCT
CTCGACCCATAACCGTATTCTCTCCCCCTTCCAACACTACACCACAGTCC
GCACAAACGAACTACAACGAGACCGACTACATCCCATCCATCGAACACGC
ACAAGCACATCAGCGACGACTTAATGCAACCTCCCGACCCCAACGCCTTC
CCACGGACGCCGAAATCGCCGCCAAAGCAGCCGCAGAAGAGGAACGGCTC
GCCGCAGTCACTCAAGTAGACGTCAAGGTGCGCCTACCAGACCAAAGCCA
AGTCGTGGCCAAGTTCGGACAAGAAGACACGGCCAAATCACTCTACGACT
TTGTCCGAAACTGTCTTGCCGCGCCATTCGCCAGCGAGAAATTTATCATC
ACGTCCTCCCTCCCCAAGACATCTAGCGGAGGACAACCGGGGAGACATAT
CCAAAACGTCGTTCCCGACTCAGACCAACAGCTGCTGATCAAGGATCTAG
CCATGATCGGTCGTGTGCTAGTCAACTTCACTTGGGATGCGAACGCATCC
CCTGCCGCCCGGCAAAGCCGGGAACTCTTGAAACCCGAACTACGGACACG
CGCGCAGGAACTCAAGGTTGAACAGCCCAAGGACGTAACAGATAACTCGG
AAGTGAGCAGGCCGAAGCCGACAAGCACCGGGGATGAAACTCGCGGCGAG
AAGCGGAAGCCAGGCGGCATGCCCAAATGGTTGAAACTACCAGGCAAGAA
ATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008488KJC3_008488Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008488-T1.utr5p1KJC3_008488-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008488-T1.exon1KJC3_008488-T1.exon1Aspergillus niger KJC3exon
KJC3_008488-T1.exon2KJC3_008488-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008488-T1.cdsKJC3_008488-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008488-T1.utr3p1KJC3_008488-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008488-T1KJC3_008488-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR001012
DBxrefInterPro:IPR021569
DBxrefPFAM:PF00789
DBxrefPFAM:PF11470
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2202064..2203999 +
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