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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2217635..2221207+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008494-T1 ID=KJC3_008494-T1|Name=KJC3_008494-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3573bp|location=Sequence derived from alignment at ch6:2217635..2221207+ (Aspergillus niger KJC3)
CTGCATAAGCTCATCAGTAGATAGTCAGGAGACATTCTTCTTGTTGGGGG
TAACCCCCTAGGGGGGTATAACCTGAAAGCTGGTGGTCTTAAGGCGTTTA
TCAAGCGCTTTAGTGCAACAGGAGCGGTTAGAAGAGAGTCACAAGCTGAA
GCCATGTGCTGCTTGGCTGAAGTACTACTAAATGCACCACGTACAGATGA
CCTGCAGTCAGTTGCCAATTGAAGAGAATCGACATTGTGAAGCCGTTCGC
ACCGGGGGTCTGAAAGATGATACTTCATTCATTGCTCCATGAGAACTATT
TATATTGCTATGATCCAATCTGTACAACGGTGAAGTGTGCTCTATGAGGA
TGGCCATGTTATAGGAGCTGAGTAGAGGAGATCAAGTATAAGTGTGGCAG
ACGATTGGTGTCCGGATTTCAGCCATGTTCCTTCGGTCATATGGTGGAGA
CACGCCAGCCTGATTATTGCCACAAAAAGAAGAAGGCATCACATTGTACT
AGAATATGTTGCCCCCTGCATACTCACATAAGGTTCACCGAAGCGCTGGG
ACATGCGAAACGAATGCACTAATATGGAAAAGGGTGGTGGTGGCCAACCT
GCCGCAAGTATCGGAACTGTTGGGATATGAGCAAGCCCCATCTCACTGTT
CATACAAAGATAAAATCTGGATAATTTATTCCGATCCAACTGTAGTAATA
ACCCCGACGTGGTCCACTTATGACAGAGCTAAAGCGCTGCTGAGATATAT
TTGGCGTATCGACGGTGAGACGGCGCCGGGTTACTCCTTCGGCCTTAGTT
TTCCGTTAGGGTCGTCGTCTAGCACTGAAGAGGGACAAATCACAGCCCAT
GACCTTGTCCGCTAACCCATCAAACTGGATTCAATCCCGTCTCTCCTCCG
TTTCTTTTGACCGGCGTAATTGTTGGAAGTTGGAAAGATGTGTATGTGTT
GGAGGATACGGAGTAGAGATAGATGGGATCGACCCGACGACAGGTAGAGT
TTCGGCTTCTTCCACGGTTCCACTCAATCATCCGCCGCCCCATTGTTTGC
TCGGTTTGCGCGCAGATTCCCCGACCAGAAAATCATGCTCACGCCGGCCA
GACCAATCGCCATATGATCAATTCTCTTTCTTTCTTCGAATCTTTTCTCT
TTGCTTCGTGCCGGTCATACCGTCTGGTACCTTCAGGCCAAGAGCACACC
GTTTCGACATCTCTAGCGCCCTTCTCCCGTCGCGTCAAACTCCAGCGCTT
GGTGGGGAGTTCTTTCTGTCAATGTCCGCAATCCTCGCGCGTACCTGAGA
GTTCTCATCCATACTACTTGTATCCCACCCCTTCCTCTCCGACCGCACAC
CGTCTACCTTCCGTATCTGAGACGGAACTTGTCGCGTCGGATACAAGGAC
AAGATCATCAACTATATAAACCCGTTACCACCAGCGTCTGATCCGTGCCC
CCTCATACCATGTCCGAACCTACCCCCGCTGGAGCTGCCTTGAGCAATGG
CTCCGAGAGCACCAGCACATCAAATGTCAATACTGGAGATAACGCGTCAG
GGGTGAGCTTCCCTTTGTAGGGTCAAGCCTTTCATGCGCTGATATATATC
GTTATTTTCTAGCTCTTTCAAACCCTGCAAGGTCATGTCGACGATATCCG
TTCTCTCCTACAATGCGGCGTTTGCATCCGACCACTTTATGAACCCTATA
CCCTTGCCTGCGGACATACCTTTTGCTACAGTGTCAGTATCGCCAATCTC
GACGACACTCATAAGTTTTGGCGTCTAACCTTTCGCTCTAGTGTCTAACA
TCATGGTTTGTTGGTGGGAGGCACAACAAGACATGCCCGGACTGTCGAGC
ACCGGTGAAAGCGCAACCAGCTCCCGCTTACTTGGTAGGCCTCTGCATAT
CATACTTGTTTCTGATCCGATGCTCAACAGGCACTAACTGAAATACTCAA
GGTCCGCGCTGTTGTTCAAATGTTCACAAGTCGCCCGGAGCTGCTTGATA
AGGGCGAGACCACAGACGAACACCTAAGCCATCAACGCGAAGAAGCGGAG
CGACTGGAAAAAGACAAGGCCAACACACACCCGCGGGAAGGGGGCCTGTT
CCGTGGTACGTTCAACAAGAAGCTTCCAGTCGCGCAACCTATCGTGGACC
TCGAGGACAATGTTGTGCGTTGTCCACGTTGTTCCTGGGAGCTAGAGGAA
GATGAAGGATGTGCCCAATGCGGGTATCGACAAGATGATGAGTCTGTGAC
TGGAAGTTCAGGCTGGAGTGAGTCAGACGAAAACTCCGAGATGACGGACT
ATTTGGAAGACGATGATGAGATTGAAGATGGGTTTGGGGACGCGGATGAA
TATGGCTGGGATCCCAGCCATGACCAGCTGCCCCTTGATATTCAACCTGC
CGACATAGACCAACTTTATCGTCAGTGGTATGGCCTAGCGCCTGGCGACC
TTCCGGGTGTGCGCACAACTGGGCCTTTTCGCCGGCAGAACCATTATGGC
TGGCCTTCTGGAGTTTCGTCAGCTCTCGAGGAAGATAGCGACATGGATGA
TGAGGACGAGGATGCAGACATGGATTCGTTCATCGACGATGACTTGGAAC
ACGATGATTATTCAGAATCTGACCGATCCACAGTGGTTGGGCGGCATGAA
ATTTCGGTCACCCACACTATTGGAACTGACTTGTCAACCTTTGATGAGAT
GTCTGAGGAAAGCGACGAGGAGAGCCTGGACGATGAAAGTCATGATGACG
ACGACGATGACGATGACGATGATGACGAGGATCCGATTCTGCCTCCTGTT
GGTGGCATTCGGCGCAATCGCATCCAAACCTACCGAATACAGTCGAGTTC
GCCATCTTGCGAGAATGGGACTTCCGGTACAGCGTCGGGACGCAGTGAAT
CCAGATCCCAGGGAGATATCCGTCATGATCCACGGTTACAACAGCAAGTG
TCCGCTGGATCTACTGTCATGAATGCAATCAGCGTGGATGACGATTCTGA
CGAAGGCCCCGTGCGACCAACTAGGCGGACAAGAGACAGGGGCAATCGCC
GACCCTCGGCCTATTAAATCACCCCGACAACTCATCTACGATTCTAATGA
CGATTGATATTACTTCCTAATGATCCATTATGTGCGACTTCTCTTGATCT
TGCGGTGCTCGATCACCCATCCTTGGGACCTCAAAAGAAATATTACCCTT
CTATATCAGGCCTACTACATACACCCCAACAGCCGAGCTGGCAATCTGAT
TTGCGACCACCCCGAAGAAGATACGAGGTCGCGTTCTATTCTACATGTTC
CAGGACATTTGCATCATCCCCGTAAAGAAGGCTTAACCCTCCCTCAGGCC
ATTTGAAAATACCCCTGTTTGCGATCCGTTGTCTCATGCTACTTGTTCAG
TACCTTGGGTAAAGGTTGTTATCAAGCGTTATTCGGTTTTATAACATATC
CGTTTAAGGGCACATGTATCATCAAGCATCTTATAGTCTTCTTATTTTCC
CGCCATACCATCATTCTAGATTGCAGGAAATACCGATCTCATTGATTGAG
ACAATACATAACAAAAATCTCAC back to topCoding sequence (CDS) from alignment at ch6:2217635..2221207+ >KJC3_008494-T1 ID=KJC3_008494-T1|Name=KJC3_008494-T1|organism=Aspergillus niger KJC3|type=CDS|length=5688bp|location=Sequence derived from alignment at ch6:2217635..2221207+ (Aspergillus niger KJC3)
ATGTCCGAACCTACCCCCGCTGGAGCTGCCTTGAGCAATGGCTCCGAGAG
CACCAGCACATCAAATGTCAATACTGGAGATAACGCGTCAGGGCTCTTTC
AAACCCTGCAAGGTCATGTCGACGATATCCGTTCTCTCCTACAATGCGGC
GTTTGCATCCGACCACTTTATGAACCCTATACCCTTGCCTGCGGACATAC
CTTTTGCTACAGTTGTCTAACATCATGGTTTGTTGGTGGGAGGCACAACA
AGACATGCCCGGACTGTCGAGCACCGGTGAAAGCGCAACCAGCTCCCGCT
TACTTGGTCCGCGCTGTTGTTCAAATGTTCACAAGTCGCCCGGAGCTGCT
TGATAAGGGCGAGACCACAGACGAACACCTAAGCCATCAACGCGAAGAAG
CGGAGCGACTGGAAAAAGACAAGGCCAACACACACCCGCGGGAAGGGGGC
CTGTTCCGTGGTACGTTCAACAAGAAGCTTCCAGTCGCGCAACCTATCGT
GGACCTCGAGGACAATGTTGTGCGTTGTCCACGTTGTTCCTGGGAGCTAG
AGGAAGATGAAGGATGTGCCCAATGCGGGTATCGACAAGATGATGAGTCT
GTGACTGGAAGTTCAGGCTGGAGTGAGTCAGACGAAAACTCCGAGATGAC
GGACTATTTGGAAGACGATGATGAGATTGAAGATGGGTTTGGGGACGCGG
ATGAATATGGCTGGGATCCCAGCCATGACCAGCTGCCCCTTGATATTCAA
CCTGCCGACATAGACCAACTTTATCGTCAGTGGTATGGCCTAGCGCCTGG
CGACCTTCCGGGTGTGCGCACAACTGGGCCTTTTCGCCGGCAGAACCATT
ATGGCTGGCCTTCTGGAGTTTCGTCAGCTCTCGAGGAAGATAGCGACATG
GATGATGAGGACGAGGATGCAGACATGGATTCGTTCATCGACGATGACTT
GGAACACGATGATTATTCAGAATCTGACCGATCCACAGTGGTTGGGCGGC
ATGAAATTTCGGTCACCCACACTATTGGAACTGACTTGTCAACCTTTGAT
GAGATGTCTGAGGAAAGCGACGAGGAGAGCCTGGACGATGAAAGTCATGA
TGACGACGACGATGACGATGACGATGATGACGAGGATCCGATTCTGCCTC
CTGTTGGTGGCATTCGGCGCAATCGCATCCAAACCTACCGAATACAGTCG
AGTTCGCCATCTTGCGAGAATGGGACTTCCGGTACAGCGTCGGGACGCAG
TGAATCCAGATCCCAGGGAGATATCCGTCATGATCCACGGTTACAACAGC
AAGTGTCCGCTGGATCTACTGTCATGAATGCAATCAGCGTGGATGACGAT
TCTGACGAAGGCCCCGTGCGACCAACTAGGCGGACAAGAGACAGGGGCAA
TCGCCGACCCTCGGCCTATTAAATGTCCGAACCTACCCCCGCTGGAGCTG
CCTTGAGCAATGGCTCCGAGAGCACCAGCACATCAAATGTCAATACTGGA
GATAACGCGTCAGGGCTCTTTCAAACCCTGCAAGGTCATGTCGACGATAT
CCGTTCTCTCCTACAATGCGGCGTTTGCATCCGACCACTTTATGAACCCT
ATACCCTTGCCTGCGGACATACCTTTTGCTACAGTTGTCTAACATCATGG
TTTGTTGGTGGGAGGCACAACAAGACATGCCCGGACTGTCGAGCACCGGT
GAAAGCGCAACCAGCTCCCGCTTACTTGGTCCGCGCTGTTGTTCAAATGT
TCACAAGTCGCCCGGAGCTGCTTGATAAGGGCGAGACCACAGACGAACAC
CTAAGCCATCAACGCGAAGAAGCGGAGCGACTGGAAAAAGACAAGGCCAA
CACACACCCGCGGGAAGGGGGCCTGTTCCGTGGTACGTTCAACAAGAAGC
TTCCAGTCGCGCAACCTATCGTGGACCTCGAGGACAATGTTGTGCGTTGT
CCACGTTGTTCCTGGGAGCTAGAGGAAGATGAAGGATGTGCCCAATGCGG
GTATCGACAAGATGATGAGTCTGTGACTGGAAGTTCAGGCTGGAGTGAGT
CAGACGAAAACTCCGAGATGACGGACTATTTGGAAGACGATGATGAGATT
GAAGATGGGTTTGGGGACGCGGATGAATATGGCTGGGATCCCAGCCATGA
CCAGCTGCCCCTTGATATTCAACCTGCCGACATAGACCAACTTTATCGTC
AGTGGTATGGCCTAGCGCCTGGCGACCTTCCGGGTGTGCGCACAACTGGG
CCTTTTCGCCGGCAGAACCATTATGGCTGGCCTTCTGGAGTTTCGTCAGC
TCTCGAGGAAGATAGCGACATGGATGATGAGGACGAGGATGCAGACATGG
ATTCGTTCATCGACGATGACTTGGAACACGATGATTATTCAGAATCTGAC
CGATCCACAGTGGTTGGGCGGCATGAAATTTCGGTCACCCACACTATTGG
AACTGACTTGTCAACCTTTGATGAGATGTCTGAGGAAAGCGACGAGGAGA
GCCTGGACGATGAAAGTCATGATGACGACGACGATGACGATGACGATGAT
GACGAGGATCCGATTCTGCCTCCTGTTGGTGGCATTCGGCGCAATCGCAT
CCAAACCTACCGAATACAGTCGAGTTCGCCATCTTGCGAGAATGGGACTT
CCGGTACAGCGTCGGGACGCAGTGAATCCAGATCCCAGGGAGATATCCGT
CATGATCCACGGTTACAACAGCAAGTGTCCGCTGGATCTACTGTCATGAA
TGCAATCAGCGTGGATGACGATTCTGACGAAGGCCCCGTGCGACCAACTA
GGCGGACAAGAGACAGGGGCAATCGCCGACCCTCGGCCTATTAAATGTCC
GAACCTACCCCCGCTGGAGCTGCCTTGAGCAATGGCTCCGAGAGCACCAG
CACATCAAATGTCAATACTGGAGATAACGCGTCAGGGCTCTTTCAAACCC
TGCAAGGTCATGTCGACGATATCCGTTCTCTCCTACAATGCGGCGTTTGC
ATCCGACCACTTTATGAACCCTATACCCTTGCCTGCGGACATACCTTTTG
CTACAGTTGTCTAACATCATGGTTTGTTGGTGGGAGGCACAACAAGACAT
GCCCGGACTGTCGAGCACCGGTGAAAGCGCAACCAGCTCCCGCTTACTTG
GTCCGCGCTGTTGTTCAAATGTTCACAAGTCGCCCGGAGCTGCTTGATAA
GGGCGAGACCACAGACGAACACCTAAGCCATCAACGCGAAGAAGCGGAGC
GACTGGAAAAAGACAAGGCCAACACACACCCGCGGGAAGGGGGCCTGTTC
CGTGGTACGTTCAACAAGAAGCTTCCAGTCGCGCAACCTATCGTGGACCT
CGAGGACAATGTTGTGCGTTGTCCACGTTGTTCCTGGGAGCTAGAGGAAG
ATGAAGGATGTGCCCAATGCGGGTATCGACAAGATGATGAGTCTGTGACT
GGAAGTTCAGGCTGGAGTGAGTCAGACGAAAACTCCGAGATGACGGACTA
TTTGGAAGACGATGATGAGATTGAAGATGGGTTTGGGGACGCGGATGAAT
ATGGCTGGGATCCCAGCCATGACCAGCTGCCCCTTGATATTCAACCTGCC
GACATAGACCAACTTTATCGTCAGTGGTATGGCCTAGCGCCTGGCGACCT
TCCGGGTGTGCGCACAACTGGGCCTTTTCGCCGGCAGAACCATTATGGCT
GGCCTTCTGGAGTTTCGTCAGCTCTCGAGGAAGATAGCGACATGGATGAT
GAGGACGAGGATGCAGACATGGATTCGTTCATCGACGATGACTTGGAACA
CGATGATTATTCAGAATCTGACCGATCCACAGTGGTTGGGCGGCATGAAA
TTTCGGTCACCCACACTATTGGAACTGACTTGTCAACCTTTGATGAGATG
TCTGAGGAAAGCGACGAGGAGAGCCTGGACGATGAAAGTCATGATGACGA
CGACGATGACGATGACGATGATGACGAGGATCCGATTCTGCCTCCTGTTG
GTGGCATTCGGCGCAATCGCATCCAAACCTACCGAATACAGTCGAGTTCG
CCATCTTGCGAGAATGGGACTTCCGGTACAGCGTCGGGACGCAGTGAATC
CAGATCCCAGGGAGATATCCGTCATGATCCACGGTTACAACAGCAAGTGT
CCGCTGGATCTACTGTCATGAATGCAATCAGCGTGGATGACGATTCTGAC
GAAGGCCCCGTGCGACCAACTAGGCGGACAAGAGACAGGGGCAATCGCCG
ACCCTCGGCCTATTAAATGTCCGAACCTACCCCCGCTGGAGCTGCCTTGA
GCAATGGCTCCGAGAGCACCAGCACATCAAATGTCAATACTGGAGATAAC
GCGTCAGGGCTCTTTCAAACCCTGCAAGGTCATGTCGACGATATCCGTTC
TCTCCTACAATGCGGCGTTTGCATCCGACCACTTTATGAACCCTATACCC
TTGCCTGCGGACATACCTTTTGCTACAGTTGTCTAACATCATGGTTTGTT
GGTGGGAGGCACAACAAGACATGCCCGGACTGTCGAGCACCGGTGAAAGC
GCAACCAGCTCCCGCTTACTTGGTCCGCGCTGTTGTTCAAATGTTCACAA
GTCGCCCGGAGCTGCTTGATAAGGGCGAGACCACAGACGAACACCTAAGC
CATCAACGCGAAGAAGCGGAGCGACTGGAAAAAGACAAGGCCAACACACA
CCCGCGGGAAGGGGGCCTGTTCCGTGGTACGTTCAACAAGAAGCTTCCAG
TCGCGCAACCTATCGTGGACCTCGAGGACAATGTTGTGCGTTGTCCACGT
TGTTCCTGGGAGCTAGAGGAAGATGAAGGATGTGCCCAATGCGGGTATCG
ACAAGATGATGAGTCTGTGACTGGAAGTTCAGGCTGGAGTGAGTCAGACG
AAAACTCCGAGATGACGGACTATTTGGAAGACGATGATGAGATTGAAGAT
GGGTTTGGGGACGCGGATGAATATGGCTGGGATCCCAGCCATGACCAGCT
GCCCCTTGATATTCAACCTGCCGACATAGACCAACTTTATCGTCAGTGGT
ATGGCCTAGCGCCTGGCGACCTTCCGGGTGTGCGCACAACTGGGCCTTTT
CGCCGGCAGAACCATTATGGCTGGCCTTCTGGAGTTTCGTCAGCTCTCGA
GGAAGATAGCGACATGGATGATGAGGACGAGGATGCAGACATGGATTCGT
TCATCGACGATGACTTGGAACACGATGATTATTCAGAATCTGACCGATCC
ACAGTGGTTGGGCGGCATGAAATTTCGGTCACCCACACTATTGGAACTGA
CTTGTCAACCTTTGATGAGATGTCTGAGGAAAGCGACGAGGAGAGCCTGG
ACGATGAAAGTCATGATGACGACGACGATGACGATGACGATGATGACGAG
GATCCGATTCTGCCTCCTGTTGGTGGCATTCGGCGCAATCGCATCCAAAC
CTACCGAATACAGTCGAGTTCGCCATCTTGCGAGAATGGGACTTCCGGTA
CAGCGTCGGGACGCAGTGAATCCAGATCCCAGGGAGATATCCGTCATGAT
CCACGGTTACAACAGCAAGTGTCCGCTGGATCTACTGTCATGAATGCAAT
CAGCGTGGATGACGATTCTGACGAAGGCCCCGTGCGACCAACTAGGCGGA
CAAGAGACAGGGGCAATCGCCGACCCTCGGCCTATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008494-T1.utr5p1 | KJC3_008494-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008494-T1.utr3p1 | KJC3_008494-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017907 |
| DBxref | InterPro:IPR018957 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR001841 |
| DBxref | PFAM:PF13445 |
| DBxref | PFAM:PF13639 |
| DBxref | PFAM:PF13920 |
| DBxref | PFAM:PF13923 |
| DBxref | PFAM:PF00097 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2217635..2221207 + |
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