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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2221885..2224146- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008495-T1 ID=KJC3_008495-T1|Name=KJC3_008495-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2262bp|location=Sequence derived from alignment at ch6:2221885..2224146- (Aspergillus niger KJC3)
ATGTCGTCTTTTTTCACCCTGCCCGCTTCGCAGCGGAAGCGCAAGAGAGA
AGACCGCGCTGGCGCCCCCGCGTCTAAGAAACGAGGTGTCGATGGAGACG
GAGATGCGGGCGCAAAGAGTGGCAAGAAGAAGACTAGGGAGCCGTCAGTT
TCGGGAAGCGACATTGATGAGGATGAGCTCAGTGGTGCCTCAGGGTTATC
GGAGGAGGAAAGTGGCTCAGAATCCGACGAAGGAGAGACAGCCGGAGACC
GGAGATTGAAGCTTGCGGAGCGGTACTTGGAAAATGTCCGGGATGAAGTG
GAGGACTTTGGCTTTGACGCGGCCGAGATCGATCGTGACTTGATCGCAGA
GAGGCTGAAAGAGGATGTTGTAAGTACAAATCCGCCCATCCGGCTCCTGT
TCGGCTGGTCAGGCGTTTTACATGCAGAGCTGACGAGAGCTGCAGGATGA
ATTCAAAGGACGCGTTTATCGTCAGATTGCCTCCGATTTGGCCTTCTCGA
CGGCCTCCCATACCTTCTTCCGGGCAGATACGCAGTCAACTACGTCAATT
GCAGTCCATGCGCCGTATGTTTACACCGTTTCGAAGGACAAGACCTTGAT
TAAATGGGAACTCGCCACACCCACCTCCACGATTTCTACAACAAATGGAG
AGGAGTCCAAACGCCCTCCTCGCCCCCAGCGGAAGAAGCCAAAGCAGGTC
AGGTTTGTGCGGGGCTTGCGAAAGGTTGCGGAGACGGGAGAAGAGCATGG
ACATACCAAGAACATCTTGTCCGTCGCAGTGTCGCCGTCCGGAAAATTTG
TAGCCACGGGAGGAGAAGACCGGAAACTCATCGTCTGGGACGCGGAGACT
CTTACCCCCCTGAAGACCTTCACACAACATCGCGACGCTGTCAGTGGTCT
TGCCTTCGCTCGTCATATCTCTACCATGAGTTCTGGAGAGCAGCTCTTCT
CTGGCTCTTATGACCGGACCATCAAGACCTGGTCTCTGAGTACAGCCGGC
CATGCCTATGTTGAAACACTCTTCGGACATCAAGATCATGTTACGTCCGT
CGCCGCCATGGCCATCGATCAGTGTGTCAGTGTGGGAGCGCGCGATCACA
CGGCCAGGTTGTGGAAGGTTATCGAGGAATCCCAACTGATCTTCCGTGGT
GGTTCTAAGAGCGCCTCCTATCAAGAGAACAACATTGACTGCGTATCGCC
GTTACCTCCTAACCACTTCGTTACTGGATCGGACTCAGGTTCCATCTCTC
TCTGGTCCATTCACAAGAAGAAGCCGCTTCACACGATCCCTCACGCACAC
GGCCTCGACCCCTTACCTCCACTGGACGAACTCTCCTCTGAAGTCAATCA
AGAAACCGCAGCACACAATTCCCGTCACCTCCGGCGCATGCCCCGCTGGA
TCACCGCTTTGACTACGCTTCCGGGCACAGACGTCGTACTTAGCGGCAGC
TGGGATGGCTTCATCCGGGCATGGAAGATCTCGGAAGACAAAAAGACCAT
TGTTCCTCTGGGCCCTATCGGAGCAGGATCCAGCATTCCGCTAACCCCCG
ACACCCCATCCGAGCAATTAAAGCAGACCCTTGCCTTCGACACACCGACG
AGCCCGGATCACATGGCAGTTGATGGTGCGCCGGCCCAGCAGACCGAGGA
GGAAGCAGAACCGCTGATCAAGGGTGTGATCAACGATATTGCTGTTTTCG
AGCGTCGCGCAGAAACCGCCAAACCAGGCCAAGCGCCAGCGGAACCCAAG
TCCAAGTCCAAGTCCAACACCAAGCCGTCTGCGCCCGAGCAACATGGGCT
CTGCATCGTAGCCGCTGTTGGCAAGGAACATCGGCTAGCAAGGTTCAAAT
GCTTCTCCAACAACTTCCATAACGGCCCCACCGCGGACGGTCGGAACGGT
GCCGTCGTGTTCGAAGTACCATTCATCTCCCAAAAATCGAAATGATCGAT
CCTGGCATCGATCGATTAGTATCCGAATCGAGGCGCTGACTGACTAATTG
ATTTTGGTGGCGGCGCTGGACGGCTGTATGCAATGTAGTGGAAACATCAT
GGCGTCTGTGCATCCTACATTTCTTTTCTATCTACTCTATGCATGTATCT
TTATTCCCGGGCCGGTGGTCTCTGCATATTGCTTTCAAAAGTTCGCATTA
GAAGAGGTACTTTTCTGTTCTACTATCTCTCTAATCCCCGTGATTTAGCC
GGTTTTTCGTACGATGTATATACTTTGAACATGAGAATTTTCTTCAATGA
CTCCTCTCCTAC back to topCoding sequence (CDS) from alignment at ch6:2221885..2224146- >KJC3_008495-T1 ID=KJC3_008495-T1|Name=KJC3_008495-T1|organism=Aspergillus niger KJC3|type=CDS|length=3738bp|location=Sequence derived from alignment at ch6:2221885..2224146- (Aspergillus niger KJC3)
GATGAATTCAAAGGACGCGTTTATCGTCAGATTGCCTCCGATTTGGCCTT
CTCGACGGCCTCCCATACCTTCTTCCGGGCAGATACGCAGTCAACTACGT
CAATTGCAGTCCATGCGCCGTATGTTTACACCGTTTCGAAGGACAAGACC
TTGATTAAATGGGAACTCGCCACACCCACCTCCACGATTTCTACAACAAA
TGGAGAGGAGTCCAAACGCCCTCCTCGCCCCCAGCGGAAGAAGCCAAAGC
AGGTCAGGTTTGTGCGGGGCTTGCGAAAGGTTGCGGAGACGGGAGAAGAG
CATGGACATACCAAGAACATCTTGTCCGTCGCAGTGTCGCCGTCCGGAAA
ATTTGTAGCCACGGGAGGAGAAGACCGGAAACTCATCGTCTGGGACGCGG
AGACTCTTACCCCCCTGAAGACCTTCACACAACATCGCGACGCTGTCAGT
GGTCTTGCCTTCGCTCGTCATATCTCTACCATGAGTTCTGGAGAGCAGCT
CTTCTCTGGCTCTTATGACCGGACCATCAAGACCTGGTCTCTGAGTACAG
CCGGCCATGCCTATGTTGAAACACTCTTCGGACATCAAGATCATGTTACG
TCCGTCGCCGCCATGGCCATCGATCAGTGTGTCAGTGTGGGAGCGCGCGA
TCACACGGCCAGGTTGTGGAAGGTTATCGAGGAATCCCAACTGATCTTCC
GTGGTGGTTCTAAGAGCGCCTCCTATCAAGAGAACAACATTGACTGCGTA
TCGCCGTTACCTCCTAACCACTTCGTTACTGGATCGGACTCAGGTTCCAT
CTCTCTCTGGTCCATTCACAAGAAGAAGCCGCTTCACACGATCCCTCACG
CACACGGCCTCGACCCCTTACCTCCACTGGACGAACTCTCCTCTGAAGTC
AATCAAGAAACCGCAGCACACAATTCCCGTCACCTCCGGCGCATGCCCCG
CTGGATCACCGCTTTGACTACGCTTCCGGGCACAGACGTCGTACTTAGCG
GCAGCTGGGATGGCTTCATCCGGGCATGGAAGATCTCGGAAGACAAAAAG
ACCATTGTTCCTCTGGGCCCTATCGGAGCAGGATCCAGCATTCCGCTAAC
CCCCGACACCCCATCCGAGCAATTAAAGCAGACCCTTGCCTTCGACACAC
CGACGAGCCCGGATCACATGGCAGTTGATGGTGCGCCGGCCCAGCAGACC
GAGGAGGAAGCAGAACCGCTGATCAAGGGTGTGATCAACGATATTGCTGT
TTTCGAGCGTCGCGCAGAAACCGCCAAACCAGGCCAAGCGCCAGCGGAAC
CCAAGTCCAAGTCCAAGTCCAACACCAAGCCGTCTGCGCCCGAGCAACAT
GGGCTCTGCATCGTAGCCGCTGTTGGCAAGGAACATCGGCTAGCAAGGTT
CAAATGCTTCTCCAACAACTTCCATAACGGCCCCACCGCGGACGGTCGGA
ACGGTGCCGTCGTGTTCGAAGTACCATTCATCTCCCAAAAATCGAAATGA
ATGTCGTCTTTTTTCACCCTGCCCGCTTCGCAGCGGAAGCGCAAGAGAGA
AGACCGCGCTGGCGCCCCCGCGTCTAAGAAACGAGGTGTCGATGGAGACG
GAGATGCGGGCGCAAAGAGTGGCAAGAAGAAGACTAGGGAGCCGTCAGTT
TCGGGAAGCGACATTGATGAGGATGAGCTCAGTGGTGCCTCAGGGTTATC
GGAGGAGGAAAGTGGCTCAGAATCCGACGAAGGAGAGACAGCCGGAGACC
GGAGATTGAAGCTTGCGGAGCGGTACTTGGAAAATGTCCGGGATGAAGTG
GAGGACTTTGGCTTTGACGCGGCCGAGATCGATCGTGACTTGATCGCAGA
GAGGCTGAAAGAGGATGTTGATGAATTCAAAGGACGCGTTTATCGTCAGA
TTGCCTCCGATTTGGCCTTCTCGACGGCCTCCCATACCTTCTTCCGGGCA
GATACGCAGTCAACTACGTCAATTGCAGTCCATGCGCCGTATGTTTACAC
CGTTTCGAAGGACAAGACCTTGATTAAATGGGAACTCGCCACACCCACCT
CCACGATTTCTACAACAAATGGAGAGGAGTCCAAACGCCCTCCTCGCCCC
CAGCGGAAGAAGCCAAAGCAGGTCAGGTTTGTGCGGGGCTTGCGAAAGGT
TGCGGAGACGGGAGAAGAGCATGGACATACCAAGAACATCTTGTCCGTCG
CAGTGTCGCCGTCCGGAAAATTTGTAGCCACGGGAGGAGAAGACCGGAAA
CTCATCGTCTGGGACGCGGAGACTCTTACCCCCCTGAAGACCTTCACACA
ACATCGCGACGCTGTCAGTGGTCTTGCCTTCGCTCGTCATATCTCTACCA
TGAGTTCTGGAGAGCAGCTCTTCTCTGGCTCTTATGACCGGACCATCAAG
ACCTGGTCTCTGAGTACAGCCGGCCATGCCTATGTTGAAACACTCTTCGG
ACATCAAGATCATGTTACGTCCGTCGCCGCCATGGCCATCGATCAGTGTG
TCAGTGTGGGAGCGCGCGATCACACGGCCAGGTTGTGGAAGGTTATCGAG
GAATCCCAACTGATCTTCCGTGGTGGTTCTAAGAGCGCCTCCTATCAAGA
GAACAACATTGACTGCGTATCGCCGTTACCTCCTAACCACTTCGTTACTG
GATCGGACTCAGGTTCCATCTCTCTCTGGTCCATTCACAAGAAGAAGCCG
CTTCACACGATCCCTCACGCACACGGCCTCGACCCCTTACCTCCACTGGA
CGAACTCTCCTCTGAAGTCAATCAAGAAACCGCAGCACACAATTCCCGTC
ACCTCCGGCGCATGCCCCGCTGGATCACCGCTTTGACTACGCTTCCGGGC
ACAGACGTCGTACTTAGCGGCAGCTGGGATGGCTTCATCCGGGCATGGAA
GATCTCGGAAGACAAAAAGACCATTGTTCCTCTGGGCCCTATCGGAGCAG
GATCCAGCATTCCGCTAACCCCCGACACCCCATCCGAGCAATTAAAGCAG
ACCCTTGCCTTCGACACACCGACGAGCCCGGATCACATGGCAGTTGATGG
TGCGCCGGCCCAGCAGACCGAGGAGGAAGCAGAACCGCTGATCAAGGGTG
TGATCAACGATATTGCTGTTTTCGAGCGTCGCGCAGAAACCGCCAAACCA
GGCCAAGCGCCAGCGGAACCCAAGTCCAAGTCCAAGTCCAACACCAAGCC
GTCTGCGCCCGAGCAACATGGGCTCTGCATCGTAGCCGCTGTTGGCAAGG
AACATCGGCTAGCAAGGTTCAAATGCTTCTCCAACAACTTCCATAACGGC
CCCACCGCGGACGGTCGGAACGGTGCCGTCGTGTTCGAAGTACCATTCAT
CTCCCAAAAATCGAAATGAATGTCGTCTTTTTTCACCCTGCCCGCTTCGC
AGCGGAAGCGCAAGAGAGAAGACCGCGCTGGCGCCCCCGCGTCTAAGAAA
CGAGGTGTCGATGGAGACGGAGATGCGGGCGCAAAGAGTGGCAAGAAGAA
GACTAGGGAGCCGTCAGTTTCGGGAAGCGACATTGATGAGGATGAGCTCA
GTGGTGCCTCAGGGTTATCGGAGGAGGAAAGTGGCTCAGAATCCGACGAA
GGAGAGACAGCCGGAGACCGGAGATTGAAGCTTGCGGAGCGGTACTTGGA
AAATGTCCGGGATGAAGTGGAGGACTTTGGCTTTGACGCGGCCGAGATCG
ATCGTGACTTGATCGCAGAGAGGCTGAAAGAGGATGTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008495-T1.utr3p1 | KJC3_008495-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2221885..2224146 - |
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