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KJC3_008497-T1, KJC3_008497-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008497-T1
Unique NameKJC3_008497-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2225639..2227784+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008497-T1 ID=KJC3_008497-T1|Name=KJC3_008497-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2146bp|location=Sequence derived from alignment at ch6:2225639..2227784+ (Aspergillus niger KJC3)
GGTGTTTGGCATGTTTGCACTGGGCGGTTTGCATCGCGTCCTTCGCAGTC
CGATTCCCGCAACCCCAGCAGCTTCCCTCACCAATCTCGCCATTTTATCC
AGTCATGATGTCGAAGAGACAAGCTGAGCTGTCGCTCGAGGAAGAGCTCG
CAGCAGGCTCTCCTGCCTCGAAGAAAGCGCGTGTGGAGGACGAAGAGCTG
CCGGAGGACGACCCGCGCCGTGGAGCTTTGCCGATTCGCCGGGCGACTGG
ACAGCAACTTGAAGAACATGAGCGCAGCGGACAAGATATTCTTGCAGCAG
CCGATCAGGAAGGCGAAGAGCTAGCGGAAGCAGCGCAAGATGGAGGCCCC
GAATCGTCCGATATTGATGCTGATGACGACAAACCGGTTATCGCGGCCCC
GAAACGTCAGAGCGCCCCCATGGAGGGCTACAGCGACCTGTACCTCGATA
CGATCAATCGCGAAATCCTCGACTTCGATTTTGAAAAGCTATGTTCGGTC
AGCTTGTCGAATATTAATGTGTACGCTTGTCTGGTGTGCGGCAAATACTT
CCAGGGCAGAGGACCGAAGTCGCATGCCTATTTCCATGCGCTTGAGGTCG
GACACCATGTTTTCGTCAATATGGGCACTAAAAAAGTCTACGTTCTCCCG
GAAGGCTATGAGGTTAAGAACCAGAGCTTGGACGATATCAAATACGTGGT
GGACCCGTACTACAGCAAGGATGAGGTGATGAAGCTGGACAAGGAAGTAC
ACGACGCATTCGACCTGGCAGGAAACCGTTATAGGCCTGGTAAGACACTC
AGACTGTTTATGTTGCTTAAGACAATGTGCTAATCATTTGCAGGTTTTGT
TGGCATGAATAACATCAAAGCCAACGATTATCTGAACGTGGTGGTCCAGC
TCTTAGCTCACGTCTTCCCCATTCGCAATTACTTCCTGCTGCATGAATTC
CCTCAACCAGGAACGCCTCAATTAGCACTCCGCTTCAGTACCCTAGTCCG
AAAACTATGGAACCCTAAGGCATTTCGCTCCCATGTATCTCCGCACGAAC
TGTTGCAGGAGATCGCTCTCCGCTCATCCAAGCGCTTTACCCTCACACAG
CAGTCCGATCCAGTGGAGTTCATGTCGTGGTTCTTGAACAACCTCCACCT
CTCTCTCGGAGGCTCCAAGAAACCATCCAAGACACCTACAAGCGTTGTAC
AAGCCGCATTCCAGGGTCACTTGAGGATCGAAAGCCAGGCTATCACAGCC
CATTCAGATACCCAAAACGCGCGTCTAGTTTTCACCGAATCCGGCTCCAT
CAACAGCCAAACGACACCCTTCCTCATCCTCACCTTAGACCTACCACCCA
CGCCCCTCTTCCAATCCGCGAACCGGGAATCTATCATCCCGCAAGTCCCT
CTGACTACCCTCCTGAACAAGTACAACGGAATTACCGCCTCCGAAAAACT
CGCCCACAGAGTCCGCCACAGGCTCCTCCACCCCCTTCCTCCCTACCTCC
TCTTCCACATCAAGCGCTTCAGCAAGAACCGCTTCGTCTCCGAACGTAAC
CCCACAATCGTGACCTTCCCATCCCCTCGCTCATTAGACATGTCGCCCTA
TGTTGAGCCAAACCCAGAGATCTGGCCTCCAGGGGAACCGATCCTCTACG
ATCTTGTCGCAAACATCATCCTCGACCCTACTGTCGCCGCTCCAGGTGCT
CACGAGGAAGCCGCAGCAGACAAAGGAGTCAATGCTGCTAGCGGAAAAGC
TTCGTCAGGAGCTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTTGTTCAGT
TGCATGATAAAGCTATGTCTGCGGAGAATGGTCGGCTTCAGAAAGAACAT
GCTGGCGAGCAGCGTGGACCCGAGTGGCTGGAGATTCAGGATCTGTTTGT
CAAGCGAGCAGAAAGCGAAACTTTGTTCACGAAGGAAGGGTACTTGATGG
TATGGGAACGTCGAAAGGTTCCTGGCGTGCCGAACCGTAAGGGGAAGAAT
CCGGCTAAGTGATACCGTGATATTTGTGGATGTGGTGTCTTGTTAAATAC
TGCTTGTTGAACGGTCCCGACTGTAGGCCTTGGCACGGAGGGGCTACTGT
ATAATTAAGAATCTACGACGATGATAGAATTAACCATTTCTTCCGA
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Coding sequence (CDS) from alignment at ch6:2225639..2227784+

>KJC3_008497-T1 ID=KJC3_008497-T1|Name=KJC3_008497-T1|organism=Aspergillus niger KJC3|type=CDS|length=3708bp|location=Sequence derived from alignment at ch6:2225639..2227784+ (Aspergillus niger KJC3)
ATGATGTCGAAGAGACAAGCTGAGCTGTCGCTCGAGGAAGAGCTCGCAGC
AGGCTCTCCTGCCTCGAAGAAAGCGCGTGTGGAGGACGAAGAGCTGCCGG
AGGACGACCCGCGCCGTGGAGCTTTGCCGATTCGCCGGGCGACTGGACAG
CAACTTGAAGAACATGAGCGCAGCGGACAAGATATTCTTGCAGCAGCCGA
TCAGGAAGGCGAAGAGCTAGCGGAAGCAGCGCAAGATGGAGGCCCCGAAT
CGTCCGATATTGATGCTGATGACGACAAACCGGTTATCGCGGCCCCGAAA
CGTCAGAGCGCCCCCATGGAGGGCTACAGCGACCTGTACCTCGATACGAT
CAATCGCGAAATCCTCGACTTCGATTTTGAAAAGCTATGTTCGGTCAGCT
TGTCGAATATTAATGTGTACGCTTGTCTGGTGTGCGGCAAATACTTCCAG
GGCAGAGGACCGAAGTCGCATGCCTATTTCCATGCGCTTGAGGTCGGACA
CCATGTTTTCGTCAATATGGGCACTAAAAAAGTCTACGTTCTCCCGGAAG
GCTATGAGGTTAAGAACCAGAGCTTGGACGATATCAAATACGTGGTGGAC
CCGTACTACAGCAAGGATGAGGTGATGAAGCTGGACAAGGAAGTACACGA
CGCATTCGACCTGGCAGGAAACCGTTATAGGCCTGGTTTTGTTGGCATGA
ATAACATCAAAGCCAACGATTATCTGAACGTGGTGGTCCAGCTCTTAGCT
CACGTCTTCCCCATTCGCAATTACTTCCTGCTGCATGAATTCCCTCAACC
AGGAACGCCTCAATTAGCACTCCGCTTCAGTACCCTAGTCCGAAAACTAT
GGAACCCTAAGGCATTTCGCTCCCATGTATCTCCGCACGAACTGTTGCAG
GAGATCGCTCTCCGCTCATCCAAGCGCTTTACCCTCACACAGCAGTCCGA
TCCAGTGGAGTTCATGTCGTGGTTCTTGAACAACCTCCACCTCTCTCTCG
GAGGCTCCAAGAAACCATCCAAGACACCTACAAGCGTTGTACAAGCCGCA
TTCCAGGGTCACTTGAGGATCGAAAGCCAGGCTATCACAGCCCATTCAGA
TACCCAAAACGCGCGTCTAGTTTTCACCGAATCCGGCTCCATCAACAGCC
AAACGACACCCTTCCTCATCCTCACCTTAGACCTACCACCCACGCCCCTC
TTCCAATCCGCGAACCGGGAATCTATCATCCCGCAAGTCCCTCTGACTAC
CCTCCTGAACAAGTACAACGGAATTACCGCCTCCGAAAAACTCGCCCACA
GAGTCCGCCACAGGCTCCTCCACCCCCTTCCTCCCTACCTCCTCTTCCAC
ATCAAGCGCTTCAGCAAGAACCGCTTCGTCTCCGAACGTAACCCCACAAT
CGTGACCTTCCCATCCCCTCGCTCATTAGACATGTCGCCCTATGTTGAGC
CAAACCCAGAGATCTGGCCTCCAGGGGAACCGATCCTCTACGATCTTGTC
GCAAACATCATCCTCGACCCTACTGTCGCCGCTCCAGGTGCTCACGAGGA
AGCCGCAGCAGACAAAGGAGTCAATGCTGCTAGCGGAAAAGCTTCGTCAG
GAGCTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTTGTTCAGTTGCATGAT
AAAGCTATGTCTGCGGAGAATGGTCGGCTTCAGAAAGAACATGCTGGCGA
GCAGCGTGGACCCGAGTGGCTGGAGATTCAGGATCTGTTTGTCAAGCGAG
CAGAAAGCGAAACTTTGTTCACGAAGGAAGGGTACTTGATGGTATGGGAA
CGTCGAAAGGTTCCTGGCGTGCCGAACCGTAAGGGGAAGAATCCGGCTAA
GTGAATGATGTCGAAGAGACAAGCTGAGCTGTCGCTCGAGGAAGAGCTCG
CAGCAGGCTCTCCTGCCTCGAAGAAAGCGCGTGTGGAGGACGAAGAGCTG
CCGGAGGACGACCCGCGCCGTGGAGCTTTGCCGATTCGCCGGGCGACTGG
ACAGCAACTTGAAGAACATGAGCGCAGCGGACAAGATATTCTTGCAGCAG
CCGATCAGGAAGGCGAAGAGCTAGCGGAAGCAGCGCAAGATGGAGGCCCC
GAATCGTCCGATATTGATGCTGATGACGACAAACCGGTTATCGCGGCCCC
GAAACGTCAGAGCGCCCCCATGGAGGGCTACAGCGACCTGTACCTCGATA
CGATCAATCGCGAAATCCTCGACTTCGATTTTGAAAAGCTATGTTCGGTC
AGCTTGTCGAATATTAATGTGTACGCTTGTCTGGTGTGCGGCAAATACTT
CCAGGGCAGAGGACCGAAGTCGCATGCCTATTTCCATGCGCTTGAGGTCG
GACACCATGTTTTCGTCAATATGGGCACTAAAAAAGTCTACGTTCTCCCG
GAAGGCTATGAGGTTAAGAACCAGAGCTTGGACGATATCAAATACGTGGT
GGACCCGTACTACAGCAAGGATGAGGTGATGAAGCTGGACAAGGAAGTAC
ACGACGCATTCGACCTGGCAGGAAACCGTTATAGGCCTGGTTTTGTTGGC
ATGAATAACATCAAAGCCAACGATTATCTGAACGTGGTGGTCCAGCTCTT
AGCTCACGTCTTCCCCATTCGCAATTACTTCCTGCTGCATGAATTCCCTC
AACCAGGAACGCCTCAATTAGCACTCCGCTTCAGTACCCTAGTCCGAAAA
CTATGGAACCCTAAGGCATTTCGCTCCCATGTATCTCCGCACGAACTGTT
GCAGGAGATCGCTCTCCGCTCATCCAAGCGCTTTACCCTCACACAGCAGT
CCGATCCAGTGGAGTTCATGTCGTGGTTCTTGAACAACCTCCACCTCTCT
CTCGGAGGCTCCAAGAAACCATCCAAGACACCTACAAGCGTTGTACAAGC
CGCATTCCAGGGTCACTTGAGGATCGAAAGCCAGGCTATCACAGCCCATT
CAGATACCCAAAACGCGCGTCTAGTTTTCACCGAATCCGGCTCCATCAAC
AGCCAAACGACACCCTTCCTCATCCTCACCTTAGACCTACCACCCACGCC
CCTCTTCCAATCCGCGAACCGGGAATCTATCATCCCGCAAGTCCCTCTGA
CTACCCTCCTGAACAAGTACAACGGAATTACCGCCTCCGAAAAACTCGCC
CACAGAGTCCGCCACAGGCTCCTCCACCCCCTTCCTCCCTACCTCCTCTT
CCACATCAAGCGCTTCAGCAAGAACCGCTTCGTCTCCGAACGTAACCCCA
CAATCGTGACCTTCCCATCCCCTCGCTCATTAGACATGTCGCCCTATGTT
GAGCCAAACCCAGAGATCTGGCCTCCAGGGGAACCGATCCTCTACGATCT
TGTCGCAAACATCATCCTCGACCCTACTGTCGCCGCTCCAGGTGCTCACG
AGGAAGCCGCAGCAGACAAAGGAGTCAATGCTGCTAGCGGAAAAGCTTCG
TCAGGAGCTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTTGTTCAGTTGCA
TGATAAAGCTATGTCTGCGGAGAATGGTCGGCTTCAGAAAGAACATGCTG
GCGAGCAGCGTGGACCCGAGTGGCTGGAGATTCAGGATCTGTTTGTCAAG
CGAGCAGAAAGCGAAACTTTGTTCACGAAGGAAGGGTACTTGATGGTATG
GGAACGTCGAAAGGTTCCTGGCGTGCCGAACCGTAAGGGGAAGAATCCGG
CTAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000245spliceosomal complex assembly
GO:0006397mRNA processing
GO:0016579protein deubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008497KJC3_008497Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008497-T1.utr5p1KJC3_008497-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008497-T1.exon1KJC3_008497-T1.exon1Aspergillus niger KJC3exon
KJC3_008497-T1.exon2KJC3_008497-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008497-T1.cdsKJC3_008497-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008497-T1.utr3p1KJC3_008497-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008497-T1KJC3_008497-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262QL6
NoteMEROPS:MER0064621
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR033809
DBxrefInterPro:IPR028889
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR001394
DBxrefInterPro:IPR001607
DBxrefPFAM:PF02148
DBxrefPFAM:PF00443
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2225639..2227784 +
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