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KJC3_008503-T1, KJC3_008503-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008503-T1
Unique NameKJC3_008503-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2244668..2247029+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008503-T1 ID=KJC3_008503-T1|Name=KJC3_008503-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2362bp|location=Sequence derived from alignment at ch6:2244668..2247029+ (Aspergillus niger KJC3)
GCCGAACCGTATCATATCGCCTCCGTTCTCAAGCAGCAATTTTCATCAGA
CAACACGACCCTCGACCCTCGCCCTCTCCACCCCCCATAACCCCCCTTTT
CTAGAACCGCTGTTGTCTCTCGACTTCACTTGCAATCATGGCTGCCAACG
GCGACTTCTCTGACGACGAGTCCCAGCCTGGATCCCCCATGCTCGATGCG
AACGGTCACGATGACATCGAAGAGCAAGAGCCCCTCGACCAGGAGGCCAA
GCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCTCCCCAGCCCAAGC
GGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCTGGACCTGTCCACC
CTGACTCCTTTGACCCCCGAAATTATTGCGCGCCAAGCCACAATCAACAT
TGGCACCATCGGTCACGTCGCTCACGGCAAGTCGACGGTCGTTAAGGCTA
TCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTTGGAGCGAAACATT
ACGATCAAGCTGGGTTATGCCAACGCAAAGATCTACAAGTGCGACAACCC
CGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAGAGTGAGAAGGAAG
TCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCGCTACAGACTGTTG
AGACATGTGTCGTACGTTGAACCTCGGACTCAAGTGTGGACAAATTCTTC
AATGCTAACTCAGAGACCCAACTTAGTTTCGTCGACTGCCCCGGTCACGA
TATTCTGATGAGTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCC
TCCTCCTTATTGCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAG
CACTTGGCTGCCATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCA
AAACAAGGTGGACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGT
CGATCTTGAAGTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATT
CCCATTTCTGCACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCT
GGTTTCGCACATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACA
TGATCGTCATTCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAG
GAGCTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAA
GCAGAACGACGAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGA
ACGGCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTT
GCCGAGCACAACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGT
CGGTACTCGTGTGGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTT
TCGTCCTGGGTCACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAA
GTCAACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGG
CAAGCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCA
ACATCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGAT
GCTGCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAA
GATTGCCATCAGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGG
CCAACATTGTCGCGTAAGTCTTATGCTCCACTCCTTAGCTTGCGATTTCT
TCCCAGCTCTTGAGAGAATGATGTTACTAATTACGGAAACAGTGGTAACA
CCCTTGAGCCCATCCTGAACTAAAGAATTTATTGCCCGCTTGGATGGCCA
GGCTTGTATCCATCAGGTTACGGCTGATGGAGAAGTCAAAGAGTATCTGA
CACCAAGTCTTGGCAGGGTCAAGTCACGAATGAAGTAGAATGGTTTGCAG
TAGCGAAAGGGGGTGTCAGTTAACTCCCTGATTAGAGACCACAGGGGGCC
TAATCGTCGCCTATTCCACCTGCTGGGTGCGAAGAACAGGGGATCGTGAG
TATTCTCCACGATATCCAGTTGAAACGTTCGCAGAATCGAGAAGGTCGGG
CAAGCAGCAGGATGGAAAGGCAACTTAGAAGATCAGGTGGCATGGCTGGA
GTTGCGCAGACCACTTCTTTGACGTGTGTTACGACGCTTGTGGAAAATAT
TTCTTACACTTTTTTTTTCTTTTTTTTGTTCATTCTTATTATTCGGTCCG
GCTTGCATGGCTCTATGTAGATGCTGTATAGGGGAATGATGAACGCAACG
AAATAAAAGTCAGATTTCTTTGATGTCCAATACGCCGCCATTGAAAAAGA
AGCATTGATGGG
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Coding sequence (CDS) from alignment at ch6:2244668..2247029+

>KJC3_008503-T1 ID=KJC3_008503-T1|Name=KJC3_008503-T1|organism=Aspergillus niger KJC3|type=CDS|length=4626bp|location=Sequence derived from alignment at ch6:2244668..2247029+ (Aspergillus niger KJC3)
ATGGCTGCCAACGGCGACTTCTCTGACGACGAGTCCCAGCCTGGATCCCC
CATGCTCGATGCGAACGGTCACGATGACATCGAAGAGCAAGAGCCCCTCG
ACCAGGAGGCCAAGCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCT
CCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCT
GGACCTGTCCACCCTGACTCCTTTGACCCCCGAAATTATTGCGCGCCAAG
CCACAATCAACATTGGCACCATCGGTCACGTCGCTCACGGCAAGTCGACG
GTCGTTAAGGCTATCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTT
GGAGCGAAACATTACGATCAAGCTGGGTTATGCCAACGCAAAGATCTACA
AGTGCGACAACCCCGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAG
AGTGAGAAGGAAGTCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCG
CTACAGACTGTTGAGACATGTGTCTTTCGTCGACTGCCCCGGTCACGATA
TTCTGATGAGTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTC
CTCCTTATTGCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAGCA
CTTGGCTGCCATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCAAA
ACAAGGTGGACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGTCG
ATCTTGAAGTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATTCC
CATTTCTGCACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCTGG
TTTCGCACATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACATG
ATCGTCATTCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAGGA
GCTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGC
AGAACGACGAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGAAC
GGCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGC
CGAGCACAACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCG
GTACTCGTGTGGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTC
GTCCTGGGTCACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAAGT
CAACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCA
AGCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCAAC
ATCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGC
TGCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGA
TTGCCATCAGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGGCC
AACATTGTCGCTGGTAACACCCTTGAGCCCATCCTGAACTAAATGGCTGC
CAACGGCGACTTCTCTGACGACGAGTCCCAGCCTGGATCCCCCATGCTCG
ATGCGAACGGTCACGATGACATCGAAGAGCAAGAGCCCCTCGACCAGGAG
GCCAAGCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCTCCCCAGCC
CAAGCGGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCTGGACCTGT
CCACCCTGACTCCTTTGACCCCCGAAATTATTGCGCGCCAAGCCACAATC
AACATTGGCACCATCGGTCACGTCGCTCACGGCAAGTCGACGGTCGTTAA
GGCTATCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTTGGAGCGAA
ACATTACGATCAAGCTGGGTTATGCCAACGCAAAGATCTACAAGTGCGAC
AACCCCGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAGAGTGAGAA
GGAAGTCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCGCTACAGAC
TGTTGAGACATGTGTCTTTCGTCGACTGCCCCGGTCACGATATTCTGATG
AGTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTCCTCCTTAT
TGCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAGCACTTGGCTG
CCATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCAAAACAAGGTG
GACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGTCGATCTTGAA
GTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATTCCCATTTCTG
CACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCTGGTTTCGCAC
ATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACATGATCGTCAT
TCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAGGAGCTGAAGG
GTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGCAGAACGAC
GAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGAACGGCAAGAT
TCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGCCGAGCACA
ACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCGGTACTCGT
GTGGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTCGTCCTGGG
TCACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAAGTCAACTACT
TCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCAAGCAGGCC
AAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCAACATCGGTTC
TACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGCTGCCAAGC
TCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGATTGCCATC
AGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGGCCAACATTGT
CGCTGGTAACACCCTTGAGCCCATCCTGAACTAAATGGCTGCCAACGGCG
ACTTCTCTGACGACGAGTCCCAGCCTGGATCCCCCATGCTCGATGCGAAC
GGTCACGATGACATCGAAGAGCAAGAGCCCCTCGACCAGGAGGCCAAGCC
TCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCTCCCCAGCCCAAGCGGC
CAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCTGGACCTGTCCACCCTG
ACTCCTTTGACCCCCGAAATTATTGCGCGCCAAGCCACAATCAACATTGG
CACCATCGGTCACGTCGCTCACGGCAAGTCGACGGTCGTTAAGGCTATCT
CCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTTGGAGCGAAACATTACG
ATCAAGCTGGGTTATGCCAACGCAAAGATCTACAAGTGCGACAACCCCGA
GTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAGAGTGAGAAGGAAGTCG
ACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCGCTACAGACTGTTGAGA
CATGTGTCTTTCGTCGACTGCCCCGGTCACGATATTCTGATGAGTACTAT
GTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTCCTCCTTATTGCCGGAA
ACGAAACTTGCCCTCAACCTCAGACTTCGGAGCACTTGGCTGCCATCGAA
ATCATGAAGCTCAGCCACATCATCATTTTGCAAAACAAGGTGGACTTGAT
GAGAGAGGATGGTGCCCTGCAACATTACCAGTCGATCTTGAAGTTCATCC
GTGGTACTGTCGCCGATGGCTCTCCGATCATTCCCATTTCTGCACAGCTC
AAGTACAACATCGATGCTGTCAACGAATACCTGGTTTCGCACATTCCCGT
CCCCGTCCGCGATTTCACCGCTTCCCCCCACATGATCGTCATTCGTTCCT
TCGATGTGAACAAGCCTGGTGCCGAAATTGAGGAGCTGAAGGGTGGTGTT
GCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGCAGAACGACGAGATTGA
GATTCGTCCCGGTCTGGTCACCAAGGACGAGAACGGCAAGATTCAGTGCC
GTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGCCGAGCACAACGACCTC
AAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCGGTACTCGTGTGGACCC
TACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTCGTCCTGGGTCACCGCG
GACGCCTTCCCGCTATCTACACTGAGTTGGAAGTCAACTACTTCTTGCTT
CGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCAAGCAGGCCAAGGTTGC
CAAGCTTACTAAGAACGAGGTTCTCATGGTCAACATCGGTTCTACGGCTA
CCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGCTGCCAAGCTCAGCTTG
ACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGATTGCCATCAGTCGGAG
AATTGAGAAGCACTGGCGTCTGATCGGTTGGGCCAACATTGTCGCTGGTA
ACACCCTTGAGCCCATCCTGAACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GCD11KJC3_008503Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008503-T1KJC3_008503-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008503-T1.utr5p1KJC3_008503-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008503-T1.exon1KJC3_008503-T1.exon1Aspergillus niger KJC3exon
KJC3_008503-T1.exon2KJC3_008503-T1.exon2Aspergillus niger KJC3exon
KJC3_008503-T1.exon3KJC3_008503-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008503-T1.cdsKJC3_008503-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008503-T1.utr3p1KJC3_008503-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261TPN
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR009001
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR015256
DBxrefInterPro:IPR004161
DBxrefInterPro:IPR000795
DBxrefPFAM:PF03144
DBxrefPFAM:PF00009
DBxrefPFAM:PF09173
Producteukaryotic translation initiation factor 2 subunit gamma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2244668..2247029 +
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