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KJC3_008527-T1, KJC3_008527-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008527-T1
Unique NameKJC3_008527-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2314101..2315720+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008527-T1 ID=KJC3_008527-T1|Name=KJC3_008527-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1620bp|location=Sequence derived from alignment at ch6:2314101..2315720+ (Aspergillus niger KJC3)
ATGCACCACGGGCGAGTACGTCGCAAGAACGGCAGTCTCAGAGCCTCCAA
AGCTGGCCAGCGTCGCAACATGTCCCATTTGATACCCGATAATGCCCCTC
CACCTCAATCCAAAACCGTCACCGTTAGCGACGATAGTCCTGATACCTCC
GACGCCGCCTCGAACACTTCAGCGACCACCGTTATCACCAATACCTCCAG
CGTCCCTGCCACCTCTCCCACTAACGGGGTTGATCCCGTGAAGAAAGCTA
TGGCCCGCAAGGCTTCGTCGCCGATGGCGCCCCCTTTCATGGTGTCCGCG
CCGGGCAAGGTCATCGTCTTCGGTGAACATGCCGTCGTGCACGGCAAGGC
TGCCATGGCCGCCGCAATCTCCCTCCGCTCCTACTTCCTCGTAACCACTC
TGTCGAAATCACAGCGCACCATTACCTTGAACCTCCGGGACATGGATTTC
AACCACACCTGGAACATTGACGATCTGCCCTGGGATTTCTTCAAACAACC
CTCCAAGAAGAAGTACTATTACGACCTAGTAACTAGCCTCGACGAAGAAT
TGTACGACTCTCTGAAACCATGTGTTGAAGATATATCGCCCAAGGCGCCC
GAGGAGATACGGAAGAAACACAAAGGGTCGGCGCTGGCGTTCCTGTACCT
ATTTTGCTCCTTGGGCTCACCCCAGCACCCAGGAGCTATATATACTTTGC
GCTCGACCATCCCCATGGGTGCAGGTCTTGGAAGCAGCGCCAGTGTCTGC
ACTTGTTTCAGTGCTGCATTGTTACTTCAGATCCGTACTCTAGCAGGCCC
ACATGATGATCAGCCCCCGGATGAAGCGGAGTTACAGATCGAGCGTATCA
ACCGGTGGGCTTTTGTCGGAGAATTATGTATACACGGAAACCCAAGTGGT
GTGGACAACACGGTCTCTACTGGCGGCAAGGCCGTAATTTTCAGGAGAGA
GGACTACTCGAAGCCCCCGAAAGTTATACCGCTACCTAATTTCCCTGAAT
TACCGCTCTTGCTTGTTGACACACGACAGAGCCGCTCGACGGCGGTCGAA
GTTGCCAAAGTTGGGAAGCTCAAGAAGGAACACCCACTCGTCACCGAATC
GATCCTTGATGCCATTGATAAGGTGACTGTGTCCGCTCAGAGTGCGATCC
AGGGGGTGGAGGGTGATAGTATCGATAAGGAGACTCTCGAACATATCGGA
ACGCTGGTTCGTGTCAACCACGGTTTCCTAGTTTCCCTGGGGGTATCTCA
TCCGCGACTGGAGCGAATCCGGGAACTGGTCGACTTTGCCAATATTGGTT
GGACAAAGTTGACTGGTGCGGGCGGCGGTGGTTGTGCGATCACACTCCTG
CGCCCAGATGCCAGTGTGGACGCGCTCCGTGAGCTGGAGCGCAAACTCGC
TGCAGAGAATTTCTCCAAGTATGAGACAACCTTGGGTGGAGACGGTATTG
GAGTCCTCTGGCCAGCGGTGCTGCACAACGGCACTGATGAAGAGGGCGGC
GAAGAGATCGACCAGCAGAAGTTTGAAAATGCCGACGGACCCGAAGGCAT
CGAGCGCCTTGTTGGCGTCGGCGTTCAAGAACGTCGGGAAGGCTGGAAAT
TCTGGAAACGAGCTGTCTGA
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Coding sequence (CDS) from alignment at ch6:2314101..2315720+

>KJC3_008527-T1 ID=KJC3_008527-T1|Name=KJC3_008527-T1|organism=Aspergillus niger KJC3|type=CDS|length=1620bp|location=Sequence derived from alignment at ch6:2314101..2315720+ (Aspergillus niger KJC3)
ATGCACCACGGGCGAGTACGTCGCAAGAACGGCAGTCTCAGAGCCTCCAA
AGCTGGCCAGCGTCGCAACATGTCCCATTTGATACCCGATAATGCCCCTC
CACCTCAATCCAAAACCGTCACCGTTAGCGACGATAGTCCTGATACCTCC
GACGCCGCCTCGAACACTTCAGCGACCACCGTTATCACCAATACCTCCAG
CGTCCCTGCCACCTCTCCCACTAACGGGGTTGATCCCGTGAAGAAAGCTA
TGGCCCGCAAGGCTTCGTCGCCGATGGCGCCCCCTTTCATGGTGTCCGCG
CCGGGCAAGGTCATCGTCTTCGGTGAACATGCCGTCGTGCACGGCAAGGC
TGCCATGGCCGCCGCAATCTCCCTCCGCTCCTACTTCCTCGTAACCACTC
TGTCGAAATCACAGCGCACCATTACCTTGAACCTCCGGGACATGGATTTC
AACCACACCTGGAACATTGACGATCTGCCCTGGGATTTCTTCAAACAACC
CTCCAAGAAGAAGTACTATTACGACCTAGTAACTAGCCTCGACGAAGAAT
TGTACGACTCTCTGAAACCATGTGTTGAAGATATATCGCCCAAGGCGCCC
GAGGAGATACGGAAGAAACACAAAGGGTCGGCGCTGGCGTTCCTGTACCT
ATTTTGCTCCTTGGGCTCACCCCAGCACCCAGGAGCTATATATACTTTGC
GCTCGACCATCCCCATGGGTGCAGGTCTTGGAAGCAGCGCCAGTGTCTGC
ACTTGTTTCAGTGCTGCATTGTTACTTCAGATCCGTACTCTAGCAGGCCC
ACATGATGATCAGCCCCCGGATGAAGCGGAGTTACAGATCGAGCGTATCA
ACCGGTGGGCTTTTGTCGGAGAATTATGTATACACGGAAACCCAAGTGGT
GTGGACAACACGGTCTCTACTGGCGGCAAGGCCGTAATTTTCAGGAGAGA
GGACTACTCGAAGCCCCCGAAAGTTATACCGCTACCTAATTTCCCTGAAT
TACCGCTCTTGCTTGTTGACACACGACAGAGCCGCTCGACGGCGGTCGAA
GTTGCCAAAGTTGGGAAGCTCAAGAAGGAACACCCACTCGTCACCGAATC
GATCCTTGATGCCATTGATAAGGTGACTGTGTCCGCTCAGAGTGCGATCC
AGGGGGTGGAGGGTGATAGTATCGATAAGGAGACTCTCGAACATATCGGA
ACGCTGGTTCGTGTCAACCACGGTTTCCTAGTTTCCCTGGGGGTATCTCA
TCCGCGACTGGAGCGAATCCGGGAACTGGTCGACTTTGCCAATATTGGTT
GGACAAAGTTGACTGGTGCGGGCGGCGGTGGTTGTGCGATCACACTCCTG
CGCCCAGATGCCAGTGTGGACGCGCTCCGTGAGCTGGAGCGCAAACTCGC
TGCAGAGAATTTCTCCAAGTATGAGACAACCTTGGGTGGAGACGGTATTG
GAGTCCTCTGGCCAGCGGTGCTGCACAACGGCACTGATGAAGAGGGCGGC
GAAGAGATCGACCAGCAGAAGTTTGAAAATGCCGACGGACCCGAAGGCAT
CGAGCGCCTTGTTGGCGTCGGCGTTCAAGAACGTCGGGAAGGCTGGAAAT
TCTGGAAACGAGCTGTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004496mevalonate kinase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008527KJC3_008527Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008527-T1.exon1KJC3_008527-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008527-T1.cdsKJC3_008527-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008527-T1KJC3_008527-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR006203
DBxrefInterPro:IPR006205
DBxrefInterPro:IPR014721
DBxrefInterPro:IPR036554
DBxrefInterPro:IPR006204
DBxrefInterPro:IPR013750
DBxrefPFAM:PF00288
DBxrefPFAM:PF08544
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2314101..2315720 +
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