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KJC3_008532-T1, KJC3_008532-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008532-T1
Unique NameKJC3_008532-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2325226..2325927+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008532-T1 ID=KJC3_008532-T1|Name=KJC3_008532-T1|organism=Aspergillus niger KJC3|type=mRNA|length=702bp|location=Sequence derived from alignment at ch6:2325226..2325927+ (Aspergillus niger KJC3)
CGTTCACTCTGTTCGACCACCATCTTATAACTCGTTCTTGGACTGTTAAA
AAGTTTTCAGGAGCTCAAGTTTCTTGATATTAGGGTCTATATACAGTGTC
TTGGCTTGTTTACCGAAATTTTCGTTGAAATCCATCAAACAGTCCCGAAT
CACAATGGCTCCTCCTTCAGAAGACACATTGACAAAGGTTTCTACGGATG
GTATGTCGATCTACGAGAAATATCTCGCCTGCAAAATTCTAATGTGGACT
TTCTTTCAGCGGCAACCGACTTTGTCCAGTCCTTCTACCCTGCCCTCGAG
AACAACCGTTCCACGATAGCCTCATTCTACAGCCAGCCCACGGCCATGAT
CCTTTTTAACGGAAACGCTGTCGCCGATGGAGCCGCCGTCCAAGAGATTT
TTGTCAACCAAATGTCCCCGACGCATTACGAAGTGCAGTCTGTCGATTGC
CAGATTATCAACAAGGCGTATCCGACACCTACCTCGACTGGAGTGAAGCT
CCCCACCGAAACGACTGTCAAGGACATGTCTATCTTGGTTGTCGTTAGCG
GCTATGTGCGCTTTGGAGAGTCCAGGGATTTGCCCCAACGAGGCTTCAGC
GAGACCTTTGTGCTGGTGCCGAATCCTTCCGCCGACGGGCCCAAAGGGAA
GCGCAAGCGAGAATGGCTTATCCAAACCCAGAACTTCCGACTCGTCGTAT
GA
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Coding sequence (CDS) from alignment at ch6:2325226..2325927+

>KJC3_008532-T1 ID=KJC3_008532-T1|Name=KJC3_008532-T1|organism=Aspergillus niger KJC3|type=CDS|length=978bp|location=Sequence derived from alignment at ch6:2325226..2325927+ (Aspergillus niger KJC3)
ATGGCTCCTCCTTCAGAAGACACATTGACAAAGGTTTCTACGGATGCGGC
AACCGACTTTGTCCAGTCCTTCTACCCTGCCCTCGAGAACAACCGTTCCA
CGATAGCCTCATTCTACAGCCAGCCCACGGCCATGATCCTTTTTAACGGA
AACGCTGTCGCCGATGGAGCCGCCGTCCAAGAGATTTTTGTCAACCAAAT
GTCCCCGACGCATTACGAAGTGCAGTCTGTCGATTGCCAGATTATCAACA
AGGCGTATCCGACACCTACCTCGACTGGAGTGAAGCTCCCCACCGAAACG
ACTGTCAAGGACATGTCTATCTTGGTTGTCGTTAGCGGCTATGTGCGCTT
TGGAGAGTCCAGGGATTTGCCCCAACGAGGCTTCAGCGAGACCTTTGTGC
TGGTGCCGAATCCTTCCGCCGACGGGCCCAAAGGGAAGCGCAAGCGAGAA
TGGCTTATCCAAACCCAGAACTTCCGACTCGTCGTATGAATGGCTCCTCC
TTCAGAAGACACATTGACAAAGGTTTCTACGGATGCGGCAACCGACTTTG
TCCAGTCCTTCTACCCTGCCCTCGAGAACAACCGTTCCACGATAGCCTCA
TTCTACAGCCAGCCCACGGCCATGATCCTTTTTAACGGAAACGCTGTCGC
CGATGGAGCCGCCGTCCAAGAGATTTTTGTCAACCAAATGTCCCCGACGC
ATTACGAAGTGCAGTCTGTCGATTGCCAGATTATCAACAAGGCGTATCCG
ACACCTACCTCGACTGGAGTGAAGCTCCCCACCGAAACGACTGTCAAGGA
CATGTCTATCTTGGTTGTCGTTAGCGGCTATGTGCGCTTTGGAGAGTCCA
GGGATTTGCCCCAACGAGGCTTCAGCGAGACCTTTGTGCTGGTGCCGAAT
CCTTCCGCCGACGGGCCCAAAGGGAAGCGCAAGCGAGAATGGCTTATCCA
AACCCAGAACTTCCGACTCGTCGTATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008532KJC3_008532Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008532-T1.utr5p1KJC3_008532-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008532-T1.exon1KJC3_008532-T1.exon1Aspergillus niger KJC3exon
KJC3_008532-T1.exon2KJC3_008532-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008532-T1.cdsKJC3_008532-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008532-T1KJC3_008532-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR032710
DBxrefInterPro:IPR018222
DBxrefInterPro:IPR002075
DBxrefPFAM:PF02136
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2325226..2325927 +
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