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KJC3_008533-T1, KJC3_008533-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008533-T1
Unique NameKJC3_008533-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2327094..2327699+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008533-T1 ID=KJC3_008533-T1|Name=KJC3_008533-T1|organism=Aspergillus niger KJC3|type=mRNA|length=606bp|location=Sequence derived from alignment at ch6:2327094..2327699+ (Aspergillus niger KJC3)
ATGCCTCAGGAAATCTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCG
CAAGGATGCGTCCTGTACGTTTACCCGACCTTTAGCCGCTTAGTTATCAT
GAGGTGGAAAGCTCCGCGGAGCTAGCTCTTTGAGGGGGAAGCTCGAGACG
GGTACCCGACTATCATCAAAAGGGCAAATTGGAATGGTTGATCGGGATGG
ATGAATGATAAGAAGTGGAGGCTAACGCGTGATGGTCTTGTCTTTCAAAC
AGCTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTTCAAGG
TCCGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCGACAAG
GCCGACAAGCTCAAGCAGAGCCTGCCCCCTGGTGCGTTTGCTCCCGTCAC
CTGATCGACTGTTTCTTTGGATGGTGTTATGGAACAAGATACATGTCGTC
GGACGCGTTTGTTTCCTTACGACTTGAGATGGGCATTGATGTGGACCTCG
GCTATTGCATGACATCATTCGGATTGAGTACTAACATCAATTGTTTTCTC
ACACAGCTCTCAAGGTTGTCGACGTCTCCAAGGGAGACAAGAAGAAGGCT
CTGTAA
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Coding sequence (CDS) from alignment at ch6:2327094..2327699+

>KJC3_008533-T1 ID=KJC3_008533-T1|Name=KJC3_008533-T1|organism=Aspergillus niger KJC3|type=CDS|length=729bp|location=Sequence derived from alignment at ch6:2327094..2327699+ (Aspergillus niger KJC3)
ATGCCTCAGGAAATCTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCG
CAAGGATGCGTCCTCTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGA
TCAAGTTCAAGGTCCGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAG
GACTCCGACAAGGCCGACAAGCTCAAGCAGAGCCTGCCCCCTGCTCTCAA
GGTTGTCGACGTCTCCAAGGGAGACAAGAAGAAGGCTCTGTAAATGCCTC
AGGAAATCTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCGCAAGGAT
GCGTCCTCTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTT
CAAGGTCCGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCG
ACAAGGCCGACAAGCTCAAGCAGAGCCTGCCCCCTGCTCTCAAGGTTGTC
GACGTCTCCAAGGGAGACAAGAAGAAGGCTCTGTAAATGCCTCAGGAAAT
CTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCGCAAGGATGCGTCCT
CTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTTCAAGGTC
CGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCGACAAGGC
CGACAAGCTCAAGCAGAGCCTGCCCCCTGCTCTCAAGGTTGTCGACGTCT
CCAAGGGAGACAAGAAGAAGGCTCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL38KJC3_008533Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008533-T1.exon1KJC3_008533-T1.exon1Aspergillus niger KJC3exon
KJC3_008533-T1.exon2KJC3_008533-T1.exon2Aspergillus niger KJC3exon
KJC3_008533-T1.exon3KJC3_008533-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008533-T1.cdsKJC3_008533-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008533-T1KJC3_008533-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265OQH
DBxrefInterPro:IPR002675
DBxrefInterPro:IPR038464
DBxrefPFAM:PF01781
Product60S ribosomal protein L38
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2327094..2327699 +
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