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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2382580..2385475- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008558-T1 ID=KJC3_008558-T1|Name=KJC3_008558-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2896bp|location=Sequence derived from alignment at ch6:2382580..2385475- (Aspergillus niger KJC3)
TCCTCCTCCGCAACTCTCATCCCTTTCCATCATCCAGTCTGGTCCGGAGG
CTGCGAAATGTCCGCTGACTCAATCAGTTGGCTTACTGATTGGCGTGTAA
CTGCTCGTCAATAATTCTTTCCAACCCAGCATGGCCGAAAAACGCAAACT
CCCCGCCCGCGAACGTCGCGAACCCGCGGCGAAGCGACGAGCCTCCGAAG
CTCCGTCTCGACCATCTCCTCAACCTCAGTCTTCGAAGAAGAAGGGGTCT
ACACCGGTCGTCGCTCCTTCGCCTCCTCCTCCACCGCCACCACCGGAACC
TACCGAACCCCCTTTGCCTACAAAGATAAAGGATGGAGAGCCTCTTCCGA
CTACGGCCACGCCGCAACCGACCAATCTTGCGGAGAAAGAGTATCAGTCG
TATGCGGAAAGGTACGCGTGCCCTCCTAATTCTATGCGCAGAGGGTGTAT
CCTCGTCTATACTTAGAAAGTCAGTTGCTGATCAGCAACAGTGCGATTCT
GCTAGCATCCCTGGAACGATCGAAGAAGAAATGGCTAAGCGACGGCATCT
TGGAGAGATACTGGACCAAACCCAAGAAGACCAAGAGGGAACAGATTGAA
GGGAAGAATCCGCCCAAGGAGACCATGTCAAAGGTTGGAGCTTGCAACAT
CGTTGTCGGACCTCATCTGTTCGACGCGATGCTGTACACTGTCAAAGATC
CCAACGCGCCGCCGCCGATCCAATACACCACCCCTCAACGCCCGATGGTC
CATTATGGACATCCGAACAACTTCCAACAATACCACCCCTATCCTCACTC
CCCTGCCCCGCCCCAGCATGCACGGCAACACCCTCCTCAAGGCTCTCCGG
CGACCCCAGGAACACCTCAACCAGGCTACACTCCTGGAAGCCACCCACCC
CCTTCACATCCTGCTCGGACTCCAAGTCAGCCACCCCATCGTCCCCCGGG
CCCTCAGTCTGCGCAAAGACCATCGCCTTCTCAGCACCCCCAGACTGCCC
AACCGCCGAAGCCTAGCCCAGACCCTGTCATTCAGATGCTTGCAACACGA
GCTGCGTCCGATCCCGAGCTCAAAGCGTTGATGCGTGTCGTGGCTTCGAG
CAAAGCATCCCAAGAGCAACTCCGCGCTTTCCAGGCGCATATTGACGAAC
TGAACGCCATCATTCGCGCAAGGGAACAACAGCAACAACGGCTACAGCAG
CAGCAGCAACAGCAGCAACAGCAGCGACAAGTTCAGCCTTCCACCCCCTC
TCATCCTCACCCTCGTCCGTCACAACCCCCATCACAACACCCATCACAAC
AGCCCCAGCCTCAGCCTCAGCAAACGCCGCAACCTTCGCAACCTCCGCAA
CAACCTCCCTCTGCACAAAAGCCTCCCCCGCAGTCAGGTCAACAAACCCC
TCAGCAGACCCCGCAAGGGCAGGCGCAACCACAGTCCACGCCGCGTGTCG
AGGTGCAAGTCCCCAAACCATCACCGTCTGCCGCCCCTACCCACCCTCCC
CCCAACTCGAACGCCCCACAGCCGCCACAGACCCCTACTCCACAGGCACC
TAAGCCAGCCCCTCAGGTTGTCATCAAACAAGAACCTGGCGTGGCGGCGG
CAGGCCAGCCCCCGTCTCAGCCGGTATCGAGTCCCAGTGTGGCGCCGGCT
CCAATTTCTACCCCGGATCCGCAAAAACAGGCAAGCCCAGCTGTACGACC
CATGCCACCCCCCCAGCAGCAGCCAACGCCGCGGCCAGGGCCTCCACATC
CACAGTATCAGCAGCCTCCGTATCAAAGCCATCCACCTGCTATACAATCC
CGACCTCCGCAGTACGGGTCGCCAGCACCATATTATCGCCCAGCTCCGCC
ACCGCCCCCTCCGAGACAGAACTACAAGTCTGTGGTCTTTGAATTTACAT
CACCGCTGACCCCATATGGAAGCAGCACATCTGGACATGCAGGCTCTGGT
GACCGATACCTATTTCCTGAGTACACAATCTTGGAATGGCTCCCTGGAGG
AAATACTGTGCTTGCCTCATTCCTGCTCGTGAGGAAGGTAGATCCAAACG
CAACGTTTCCCTTAGAGTCAGCTACTGAGACGGCCAACCCAAGGGCTAAA
GGCAAGGCATCCAAGTCCAAGTCGAAGAAAGCGGACAAGAACAAGGAGAA
AGTCAGCGAGGCCGACAAGGATAAGGGGAAAGCAGACGATAAAGAAAAAG
ACAAGCCGCAGGAGAAGTCCAATGATAAACCTGAGCCTTCGGCTACCGAA
CCTAAGCCGGACGGCTCTAAGACACCAGCCAGCAACACCCAAGCTGATCA
GAAGGCTGAAGCATCCGGAACACCTAATAAGCCCTCCGCCGATAAAGACG
GCTCGAACGACAAGAAGGCAGACACCAAAGACAAGGACAAGGACAATGAC
AAAGAGAAGGAGAACAAGGAGAAAGAGAAGGCCAAAGACTCCAATCTAAA
GGAATACTACCAACCTGTAACATTCCGCATCTTCACCAACAACCCCAAAG
TCCTCGAACCTCTAGGCCGTGTCGTGAAACCCCCCGACGAAGTACGCAAA
TACATGAATGAGATCATGGACCGAGCGGAACGCGCCCCTGAGGGATTTCT
GGCATACCGTCTGCCCCGGGAAGAGCCAGACGATAACAAGCCCGCCCCTG
AGTTAGAAGATAGTGGCAAGAAAACCGGGACTCCGGTCCCAGCTGCGCGT
GGGAGGCTGCAGTCTCGGAGTAAGACGGTGGACGAGGAATCAGGGGATGA
GAATATCGAGAAACCTGTGGAAGAGGAGGAGGAAGAGGAACTCAAGGATT
TCTATGGTCCGCCTACGGGACTTCCACCTATGGGGGCGTGATGCTTGATA
GATAGGTTTACAGTACATAGGTTTGAGTACCTAGAATATGTATGAG back to topCoding sequence (CDS) from alignment at ch6:2382580..2385475- >KJC3_008558-T1 ID=KJC3_008558-T1|Name=KJC3_008558-T1|organism=Aspergillus niger KJC3|type=CDS|length=5262bp|location=Sequence derived from alignment at ch6:2382580..2385475- (Aspergillus niger KJC3)
TGCGATTCTGCTAGCATCCCTGGAACGATCGAAGAAGAAATGGCTAAGCG
ACGGCATCTTGGAGAGATACTGGACCAAACCCAAGAAGACCAAGAGGGAA
CAGATTGAAGGGAAGAATCCGCCCAAGGAGACCATGTCAAAGGTTGGAGC
TTGCAACATCGTTGTCGGACCTCATCTGTTCGACGCGATGCTGTACACTG
TCAAAGATCCCAACGCGCCGCCGCCGATCCAATACACCACCCCTCAACGC
CCGATGGTCCATTATGGACATCCGAACAACTTCCAACAATACCACCCCTA
TCCTCACTCCCCTGCCCCGCCCCAGCATGCACGGCAACACCCTCCTCAAG
GCTCTCCGGCGACCCCAGGAACACCTCAACCAGGCTACACTCCTGGAAGC
CACCCACCCCCTTCACATCCTGCTCGGACTCCAAGTCAGCCACCCCATCG
TCCCCCGGGCCCTCAGTCTGCGCAAAGACCATCGCCTTCTCAGCACCCCC
AGACTGCCCAACCGCCGAAGCCTAGCCCAGACCCTGTCATTCAGATGCTT
GCAACACGAGCTGCGTCCGATCCCGAGCTCAAAGCGTTGATGCGTGTCGT
GGCTTCGAGCAAAGCATCCCAAGAGCAACTCCGCGCTTTCCAGGCGCATA
TTGACGAACTGAACGCCATCATTCGCGCAAGGGAACAACAGCAACAACGG
CTACAGCAGCAGCAGCAACAGCAGCAACAGCAGCGACAAGTTCAGCCTTC
CACCCCCTCTCATCCTCACCCTCGTCCGTCACAACCCCCATCACAACACC
CATCACAACAGCCCCAGCCTCAGCCTCAGCAAACGCCGCAACCTTCGCAA
CCTCCGCAACAACCTCCCTCTGCACAAAAGCCTCCCCCGCAGTCAGGTCA
ACAAACCCCTCAGCAGACCCCGCAAGGGCAGGCGCAACCACAGTCCACGC
CGCGTGTCGAGGTGCAAGTCCCCAAACCATCACCGTCTGCCGCCCCTACC
CACCCTCCCCCCAACTCGAACGCCCCACAGCCGCCACAGACCCCTACTCC
ACAGGCACCTAAGCCAGCCCCTCAGGTTGTCATCAAACAAGAACCTGGCG
TGGCGGCGGCAGGCCAGCCCCCGTCTCAGCCGGTATCGAGTCCCAGTGTG
GCGCCGGCTCCAATTTCTACCCCGGATCCGCAAAAACAGGCAAGCCCAGC
TGTACGACCCATGCCACCCCCCCAGCAGCAGCCAACGCCGCGGCCAGGGC
CTCCACATCCACAGTATCAGCAGCCTCCGTATCAAAGCCATCCACCTGCT
ATACAATCCCGACCTCCGCAGTACGGGTCGCCAGCACCATATTATCGCCC
AGCTCCGCCACCGCCCCCTCCGAGACAGAACTACAAGTCTGTGGTCTTTG
AATTTACATCACCGCTGACCCCATATGGAAGCAGCACATCTGGACATGCA
GGCTCTGGTGACCGATACCTATTTCCTGAGTACACAATCTTGGAATGGCT
CCCTGGAGGAAATACTGTGCTTGCCTCATTCCTGCTCGTGAGGAAGGTAG
ATCCAAACGCAACGTTTCCCTTAGAGTCAGCTACTGAGACGGCCAACCCA
AGGGCTAAAGGCAAGGCATCCAAGTCCAAGTCGAAGAAAGCGGACAAGAA
CAAGGAGAAAGTCAGCGAGGCCGACAAGGATAAGGGGAAAGCAGACGATA
AAGAAAAAGACAAGCCGCAGGAGAAGTCCAATGATAAACCTGAGCCTTCG
GCTACCGAACCTAAGCCGGACGGCTCTAAGACACCAGCCAGCAACACCCA
AGCTGATCAGAAGGCTGAAGCATCCGGAACACCTAATAAGCCCTCCGCCG
ATAAAGACGGCTCGAACGACAAGAAGGCAGACACCAAAGACAAGGACAAG
GACAATGACAAAGAGAAGGAGAACAAGGAGAAAGAGAAGGCCAAAGACTC
CAATCTAAAGGAATACTACCAACCTGTAACATTCCGCATCTTCACCAACA
ACCCCAAAGTCCTCGAACCTCTAGGCCGTGTCGTGAAACCCCCCGACGAA
GTACGCAAATACATGAATGAGATCATGGACCGAGCGGAACGCGCCCCTGA
GGGATTTCTGGCATACCGTCTGCCCCGGGAAGAGCCAGACGATAACAAGC
CCGCCCCTGAGTTAGAAGATAGTGGCAAGAAAACCGGGACTCCGGTCCCA
GCTGCGCGTGGGAGGCTGCAGTCTCGGAGTAAGACGGTGGACGAGGAATC
AGGGGATGAGAATATCGAGAAACCTGTGGAAGAGGAGGAGGAAGAGGAAC
TCAAGGATTTCTATGGTCCGCCTACGGGACTTCCACCTATGGGGGCGTGA
ATGGCCGAAAAACGCAAACTCCCCGCCCGCGAACGTCGCGAACCCGCGGC
GAAGCGACGAGCCTCCGAAGCTCCGTCTCGACCATCTCCTCAACCTCAGT
CTTCGAAGAAGAAGGGGTCTACACCGGTCGTCGCTCCTTCGCCTCCTCCT
CCACCGCCACCACCGGAACCTACCGAACCCCCTTTGCCTACAAAGATAAA
GGATGGAGAGCCTCTTCCGACTACGGCCACGCCGCAACCGACCAATCTTG
CGGAGAAAGAGTATCAGTCGTATGCGGAAAGTGCGATTCTGCTAGCATCC
CTGGAACGATCGAAGAAGAAATGGCTAAGCGACGGCATCTTGGAGAGATA
CTGGACCAAACCCAAGAAGACCAAGAGGGAACAGATTGAAGGGAAGAATC
CGCCCAAGGAGACCATGTCAAAGGTTGGAGCTTGCAACATCGTTGTCGGA
CCTCATCTGTTCGACGCGATGCTGTACACTGTCAAAGATCCCAACGCGCC
GCCGCCGATCCAATACACCACCCCTCAACGCCCGATGGTCCATTATGGAC
ATCCGAACAACTTCCAACAATACCACCCCTATCCTCACTCCCCTGCCCCG
CCCCAGCATGCACGGCAACACCCTCCTCAAGGCTCTCCGGCGACCCCAGG
AACACCTCAACCAGGCTACACTCCTGGAAGCCACCCACCCCCTTCACATC
CTGCTCGGACTCCAAGTCAGCCACCCCATCGTCCCCCGGGCCCTCAGTCT
GCGCAAAGACCATCGCCTTCTCAGCACCCCCAGACTGCCCAACCGCCGAA
GCCTAGCCCAGACCCTGTCATTCAGATGCTTGCAACACGAGCTGCGTCCG
ATCCCGAGCTCAAAGCGTTGATGCGTGTCGTGGCTTCGAGCAAAGCATCC
CAAGAGCAACTCCGCGCTTTCCAGGCGCATATTGACGAACTGAACGCCAT
CATTCGCGCAAGGGAACAACAGCAACAACGGCTACAGCAGCAGCAGCAAC
AGCAGCAACAGCAGCGACAAGTTCAGCCTTCCACCCCCTCTCATCCTCAC
CCTCGTCCGTCACAACCCCCATCACAACACCCATCACAACAGCCCCAGCC
TCAGCCTCAGCAAACGCCGCAACCTTCGCAACCTCCGCAACAACCTCCCT
CTGCACAAAAGCCTCCCCCGCAGTCAGGTCAACAAACCCCTCAGCAGACC
CCGCAAGGGCAGGCGCAACCACAGTCCACGCCGCGTGTCGAGGTGCAAGT
CCCCAAACCATCACCGTCTGCCGCCCCTACCCACCCTCCCCCCAACTCGA
ACGCCCCACAGCCGCCACAGACCCCTACTCCACAGGCACCTAAGCCAGCC
CCTCAGGTTGTCATCAAACAAGAACCTGGCGTGGCGGCGGCAGGCCAGCC
CCCGTCTCAGCCGGTATCGAGTCCCAGTGTGGCGCCGGCTCCAATTTCTA
CCCCGGATCCGCAAAAACAGGCAAGCCCAGCTGTACGACCCATGCCACCC
CCCCAGCAGCAGCCAACGCCGCGGCCAGGGCCTCCACATCCACAGTATCA
GCAGCCTCCGTATCAAAGCCATCCACCTGCTATACAATCCCGACCTCCGC
AGTACGGGTCGCCAGCACCATATTATCGCCCAGCTCCGCCACCGCCCCCT
CCGAGACAGAACTACAAGTCTGTGGTCTTTGAATTTACATCACCGCTGAC
CCCATATGGAAGCAGCACATCTGGACATGCAGGCTCTGGTGACCGATACC
TATTTCCTGAGTACACAATCTTGGAATGGCTCCCTGGAGGAAATACTGTG
CTTGCCTCATTCCTGCTCGTGAGGAAGGTAGATCCAAACGCAACGTTTCC
CTTAGAGTCAGCTACTGAGACGGCCAACCCAAGGGCTAAAGGCAAGGCAT
CCAAGTCCAAGTCGAAGAAAGCGGACAAGAACAAGGAGAAAGTCAGCGAG
GCCGACAAGGATAAGGGGAAAGCAGACGATAAAGAAAAAGACAAGCCGCA
GGAGAAGTCCAATGATAAACCTGAGCCTTCGGCTACCGAACCTAAGCCGG
ACGGCTCTAAGACACCAGCCAGCAACACCCAAGCTGATCAGAAGGCTGAA
GCATCCGGAACACCTAATAAGCCCTCCGCCGATAAAGACGGCTCGAACGA
CAAGAAGGCAGACACCAAAGACAAGGACAAGGACAATGACAAAGAGAAGG
AGAACAAGGAGAAAGAGAAGGCCAAAGACTCCAATCTAAAGGAATACTAC
CAACCTGTAACATTCCGCATCTTCACCAACAACCCCAAAGTCCTCGAACC
TCTAGGCCGTGTCGTGAAACCCCCCGACGAAGTACGCAAATACATGAATG
AGATCATGGACCGAGCGGAACGCGCCCCTGAGGGATTTCTGGCATACCGT
CTGCCCCGGGAAGAGCCAGACGATAACAAGCCCGCCCCTGAGTTAGAAGA
TAGTGGCAAGAAAACCGGGACTCCGGTCCCAGCTGCGCGTGGGAGGCTGC
AGTCTCGGAGTAAGACGGTGGACGAGGAATCAGGGGATGAGAATATCGAG
AAACCTGTGGAAGAGGAGGAGGAAGAGGAACTCAAGGATTTCTATGGTCC
GCCTACGGGACTTCCACCTATGGGGGCGTGAATGGCCGAAAAACGCAAAC
TCCCCGCCCGCGAACGTCGCGAACCCGCGGCGAAGCGACGAGCCTCCGAA
GCTCCGTCTCGACCATCTCCTCAACCTCAGTCTTCGAAGAAGAAGGGGTC
TACACCGGTCGTCGCTCCTTCGCCTCCTCCTCCACCGCCACCACCGGAAC
CTACCGAACCCCCTTTGCCTACAAAGATAAAGGATGGAGAGCCTCTTCCG
ACTACGGCCACGCCGCAACCGACCAATCTTGCGGAGAAAGAGTATCAGTC
GTATGCGGAAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008558-T1.utr3p1 | KJC3_008558-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008558-T1.utr5p1 | KJC3_008558-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2382580..2385475 - |
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