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KJC3_008562-T1, KJC3_008562-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008562-T1
Unique NameKJC3_008562-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2392350..2393670-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008562-T1 ID=KJC3_008562-T1|Name=KJC3_008562-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1321bp|location=Sequence derived from alignment at ch6:2392350..2393670- (Aspergillus niger KJC3)
GTGCGCTTTTCCCAAAACCTTGCCTAAAGAAGGAATAGGCAAAAGGAGAA
ACTATTCACATGATTTGCCATCGAAATCCATGCTTTGACTTCATTCATTC
AAGATCATCGGTGATAACTTGACTCGGTAATAGTATGTTCAAGACCAGGT
GTCTCACGAAGCTACATTATCATGTCCATTTCTGGAGGATCTGCGAATCA
AACTTTCAGTTCCATGGAGTTATTTTCCCCAGAAAAGAAGCACCTGGTAT
ACAGTGTAGAAGACTCGAGGCATAACCCAAATCCGATCCTCTGTCCGCAG
TGTGGCCTGATAGAGCAGTAACGGAAGGTATAAGGCTTTACAGTGCCTTT
GCGTAACATACTGTATTCAATAATACGAAAATTATCTCCTCTGTACGCTT
GTTCCTTCCGACGTCATGTTGCCCGGGTGCACGCGCAACGCATTACTTTT
CTCTCCGAACAGGGAGCTACTTCTCAATCAAGGTCGGCCTTTATGTGCAG
CTTTGGCTGCCTCCTTAGTTCTAGCAACTTTTGGCTAACGACTTGCAGAT
TTGATCAACTTCTAGCTCCAGCGGCCCCAGCCCCTCCAAGCCCCCTCGCC
GATCGCCACACTTGATCGCAGGTGACAGTAATTGTATTAGCAAGATGAGC
GAGCCTCTCCCATCGTCTTTCGAAGAACATCCGTACGTATTCGGGCTCTC
CTTGCTAATACAATTCCTACACGGGAAGTTCAACTAATCCTAACATCTTT
GTTCTTCCAGTCAGTTCCAAGAGGAGACTTCGCTCCAAAAGTTCCGCAGA
CGTCTCAAGGAAGAGCCTCTGATCCCGCTAGGTAGGCAGGCCATTGAAGC
TCGGACGCCACATATCTTGAACTTAGCTAACTTACTATAACGCCAGGATG
TGCTGCCACTTCCTACGCACTTTACCGGGCCTACCGGTCGATGAAGGCTG
GCGACTCCGTCGAGATGAATAAGATGTTCCGTGCTCGTATCTACGCCCAG
TTTTTCACCCTTATCGCCGTGGTCGCCGGAGGCATGTATTACGGTAGCGA
GCGGAAGCAACGAAGGGAGTTCGAGCAGATGGTGGAGGCACGCAAGAGCC
AGGAAAAGCGGGACGCCTGGCTGCGGGAGTTGGAGATTCGTGACAAGGAA
GACAGGGGCTGGCGGGAGCGTCACGCGGCTATTGAAGCCGCGGCGAACGA
GGCCGCGAATGCTAAGAAATCGTTCCCTGAGCAGGATGCTGCTCGCTCTG
CTATTGAGCCTTCCGAACAGAAGTCAATCGGGGTACTAATTGCTGTGAAG
GAGTTGTTGTCGAGGCAGTGA
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Coding sequence (CDS) from alignment at ch6:2392350..2393670-

>KJC3_008562-T1 ID=KJC3_008562-T1|Name=KJC3_008562-T1|organism=Aspergillus niger KJC3|type=CDS|length=1602bp|location=Sequence derived from alignment at ch6:2392350..2393670- (Aspergillus niger KJC3)
GATGTGCTGCCACTTCCTACGCACTTTACCGGGCCTACCGGTCGATGAAG
GCTGGCGACTCCGTCGAGATGAATAAGATGTTCCGTGCTCGTATCTACGC
CCAGTTTTTCACCCTTATCGCCGTGGTCGCCGGAGGCATGTATTACGGTA
GCGAGCGGAAGCAACGAAGGGAGTTCGAGCAGATGGTGGAGGCACGCAAG
AGCCAGGAAAAGCGGGACGCCTGGCTGCGGGAGTTGGAGATTCGTGACAA
GGAAGACAGGGGCTGGCGGGAGCGTCACGCGGCTATTGAAGCCGCGGCGA
ACGAGGCCGCGAATGCTAAGAAATCGTTCCCTGAGCAGGATGCTGCTCGC
TCTGCTATTGAGCCTTCCGAACAGAAGTCAATCGGGGTACTAATTGCTGT
GAAGGAGTTGTTGTCGAGGCAGTGATCAGTTCCAAGAGGAGACTTCGCTC
CAAAAGTTCCGCAGACGTCTCAAGGAAGAGCCTCTGATCCCGCTAGATGA
GCGAGCCTCTCCCATCGTCTTTCGAAGAACATCCGATGTGCTGCCACTTC
CTACGCACTTTACCGGGCCTACCGGTCGATGAAGGCTGGCGACTCCGTCG
AGATGAATAAGATGTTCCGTGCTCGTATCTACGCCCAGTTTTTCACCCTT
ATCGCCGTGGTCGCCGGAGGCATGTATTACGGTAGCGAGCGGAAGCAACG
AAGGGAGTTCGAGCAGATGGTGGAGGCACGCAAGAGCCAGGAAAAGCGGG
ACGCCTGGCTGCGGGAGTTGGAGATTCGTGACAAGGAAGACAGGGGCTGG
CGGGAGCGTCACGCGGCTATTGAAGCCGCGGCGAACGAGGCCGCGAATGC
TAAGAAATCGTTCCCTGAGCAGGATGCTGCTCGCTCTGCTATTGAGCCTT
CCGAACAGAAGTCAATCGGGGTACTAATTGCTGTGAAGGAGTTGTTGTCG
AGGCAGTGATCAGTTCCAAGAGGAGACTTCGCTCCAAAAGTTCCGCAGAC
GTCTCAAGGAAGAGCCTCTGATCCCGCTAGATGAGCGAGCCTCTCCCATC
GTCTTTCGAAGAACATCCGATGTGCTGCCACTTCCTACGCACTTTACCGG
GCCTACCGGTCGATGAAGGCTGGCGACTCCGTCGAGATGAATAAGATGTT
CCGTGCTCGTATCTACGCCCAGTTTTTCACCCTTATCGCCGTGGTCGCCG
GAGGCATGTATTACGGTAGCGAGCGGAAGCAACGAAGGGAGTTCGAGCAG
ATGGTGGAGGCACGCAAGAGCCAGGAAAAGCGGGACGCCTGGCTGCGGGA
GTTGGAGATTCGTGACAAGGAAGACAGGGGCTGGCGGGAGCGTCACGCGG
CTATTGAAGCCGCGGCGAACGAGGCCGCGAATGCTAAGAAATCGTTCCCT
GAGCAGGATGCTGCTCGCTCTGCTATTGAGCCTTCCGAACAGAAGTCAAT
CGGGGTACTAATTGCTGTGAAGGAGTTGTTGTCGAGGCAGTGATCAGTTC
CAAGAGGAGACTTCGCTCCAAAAGTTCCGCAGACGTCTCAAGGAAGAGCC
TCTGATCCCGCTAGATGAGCGAGCCTCTCCCATCGTCTTTCGAAGAACAT
CC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RCF1KJC3_008562Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008562-T1KJC3_008562-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008562-T1.cdsKJC3_008562-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008562-T1.exon4KJC3_008562-T1.exon4Aspergillus niger KJC3exon
KJC3_008562-T1.exon3KJC3_008562-T1.exon3Aspergillus niger KJC3exon
KJC3_008562-T1.exon2KJC3_008562-T1.exon2Aspergillus niger KJC3exon
KJC3_008562-T1.exon1KJC3_008562-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008562-T1.utr5p2KJC3_008562-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008562-T1.utr5p1KJC3_008562-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264J8E
DBxrefInterPro:IPR007667
DBxrefPFAM:PF04588
Product mitochondrial
ProductRespiratory supercomplex factor 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2392350..2393670 -
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