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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2415042..2418320+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008573-T1 ID=KJC3_008573-T1|Name=KJC3_008573-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3279bp|location=Sequence derived from alignment at ch6:2415042..2418320+ (Aspergillus niger KJC3)
CTGCAAGCCAATCAAGGATGGGAATGGCTCCCCTCCCCGCATCGCCACCT
CATCTTGCACCTCGACTTCTTTCATCATCATCACCGCAACGACTCCAGCT
TTCTTCATCCGTTGATTCAAGCTGATGTGTGCTTTCCATTTCTTCCGACC
AACCTTACTTTTTCAAATCCAATTCCTATCAATAGCTCCGGCAATTAGTC
CAGATGCAAGCCAACACAAGACATAGATCGACCTTGCCGATCTACGGTCC
CGATCGCAAGAACATCAAGAAGTCTCAGATCAAATTCATTCGTCCAGCAC
AGATGAGTTTGCTTGCTCGAGTGACGTGCTATCCTCCCTTGGGCCAGATA
ACATGTCACCAAAGGAGGTCCGGGAGCTCGGGATCCACGGAACCTGATAC
GGTAGATAATAAACCTCCGTCTTCCATGATACTGCCGAAAGATAGCTAAT
CCCTATAGATCAATTTCACCGTAGTGCTAGAATCAAGCACCTCATTTCCA
GTGCAGCCCTGGGATATCCAAATATGGCACAACATCTCTAGTTCTGAGTG
GACCGCAACGTCACTCAAGAGTCACGGATCTCCTGTGGCACCACTCATGA
ACGGCAGCGAGGAAGACTATAACTACTTCCGTAATGTCTTTTCAGGGAAG
ATAACTCTCCCTTCAAATGCCGGGCATGCACAATTCACTGTTCGCTATCG
AATTAATCCTGATGCCGAATGGCAATGGGTGAACCAGCAACAGGGTGCAA
ATGATGGGGTATTGGTATTTGGCTCACAAAAGCCCGAGTTCACTTCGCTC
GAGACGACTCCAACAGATTTCAAAAAGTATTTCGAGGGAATGTCTGCGGA
TATCAGCATTGAGCCAAGAAAAAGCGAATCACCCGGTTCGAACTTGTGGC
ATCTTTCCGGGAAAGCTCAGCCAGCTCATGCAGGCGAATCTGGATACAAA
GAGGTGGCCCTCGGAGTGCCAATGTCAATTCTGCGGTATTTCTCCTTGGT
GCGCATCTGGACTCCATGGCTCGGTCCAAGGCATGGACAAGGGAAATTTG
AATTGTCCGAGGAAGCCATTTTGTGCTCCTTTCTGCGGACTGACGGAGTG
AATATTGTGCTTCTTGGGTTGTCCGGCAAGGATAATATCTTGACGACTTT
TGGATCAGGCGAAAATGGGGAAGTAATCGTCAAATCCCTCAATGACAATG
CAGAGCCATCTACATTCCAAATACTGGCTTCAGCTGCGGAGGATTATGAG
GTTGCAATGAGCGCGATCGTATACGAAGCTCGCAAGCTCGCAAGACCATA
TGCCGAGCAAGAGGCGTCCGATACCAAGCGGGCCCCAGTTTCGCCACCCC
CGGACGATATAGTGGTGGTAGAAAAGGATGTGAAGGCTCAGTGGATGGCT
GAGTGGTACGATGGCTTAACCTACTGCACGTGGAACGGACTAGGTCAGGA
TTTGACGGAAGAGAAAATTCTTCGTGGTCTTGACTCACTGAAGTCTCATG
GGATCCAGATAGCTAACTTGATCATTGACGACAACTGGCAAACACTAGAC
GATGCCGAATCACAGTTCAAGAGGGGCTGGAGGCAGTTCGAAGGAAACCC
AGCTGCCTTTCCCAAAGGGTTCAAACAGACCATTGAAGCCATCCGTCAGA
GGCATCCGAACGTCGAACACATCGCAGTTTGGCATGCAATCCTCGGATAC
TGGGGAGGAATTTCAGCGGAAGGTGATCTTGCTAAGAAATACAAGACCAA
GAGAGTTGAGATCAAAGTGCCTGCTGTGGGAGGCGCTATCTCGCATGCGT
TTGAGAATGGCTCAGTGCTGGCAATTGACCCGGATGACGTTCAAAAATTC
TACGACGATTTCTATAGATATCTTGCCTCAATTGGAGTCGACTCCGTCAA
GGCAGACGCCCAGTTCTTTCTCGATTTGATCAAAGACCCAGAGGACCGGA
GAAGATTTATCACCGCTTACCAGGACGCATGGTCTATCTCCACGTTGAAA
CACTTCAGCTCAAGGGCTATATCCTGCATGTCAATGTTCCCACAAGCCAT
CTTCCACTCACAGCTTCCAACGACCAAGCCTACTATTCCCCTCCGGAACT
CAGACGACTTCTTCCCCAACATCGAATCGTCTCATCCATGGCATATCTTT
TGCAACGCCCACAACGCCCTGCTGACCCGCTACCTGAACGTCGTCCCCGA
CTGGGACATGTTCCAAACAAGCCACCCGTACGCCGGTTTCCACGCCGCGG
CACGCTGCGTCTCCGGAGGCCCAGTATACATCACCGACGAACCCGGTAAG
CACGACGTCTCCCTGATCGACCAAATGACCGCCAAAACGATACACGACGG
AACCGTCATCCTCCGCCCAAGCTTGATCGGCCGTGCCATGGACATCTACC
ACGACTACAAAGAAGGCCACATAGTGCGCGTAGGCACCTACACCGGCTGG
GCCCGAACCGGCAGCGGCATCCTAGGTCTCTTCAACATCTCCACCGCCGA
GAAATCCACCATAACCCACCTCTTAGACTTCCCAGGAATCCACCAAGACT
CTCAAGGCGAGTACATCATCCGCGCTCACACCAGCGGCATGATCGCCTCG
GACCTACGCGTCCCGGACACGGAATCATCCCTAGTGACGGTGACTTTGCC
CCCGAAGGGCTGGGAAATCTTAACAACCTACCCAACATACACCTTCGACC
TGAAGGCCAACAAACGAGCCTCCACCTCAACGCCCACAGAAACGAAAGTA
TCAGTCCTAGGCCTAGTCGGCAAAATGACCGGCGCAGCAGCAATCATCTT
CTCTGATATCTACGTCGAAGATAACGGAAGACTGCGGTTCGACATTAGTC
TCAAGGCGCTGGGCACATTAGGGATCTATTTCTCCGACTTGCCGGACTGG
AGTATTGATGATAACTTCATGGTCATGATTCTGGGGAGACCTGTGCCGAA
GAAAACTGTTTGGAAGGAAGGTGGTGATAAGGGGAGGGTGGTGGCGGTGG
ATATTCTGACTGCCTGGAAGGAGATGGGGTTGAAGGCTGGGTGGAGTAAT
GATGTGCTTGTTGAGGTGTTTGTTGGTTGAAACGTTGATAGATAGGGATG
TGGCTGACGCTTCAGAGGGGGCTATACATATTGTGGAATTTTCGTCAGTG
GGTGGTAGTACAGCATAGTATAGAACAGATTGAATATACACAGATGGGGA
TTATGCTCTAGGTTTTTCAAGAAGGGCAATGTATGAGTAATTCCTATTCG
GAGCAAAGAACCTGCGTAGTTTTGAAGTA back to topCoding sequence (CDS) from alignment at ch6:2415042..2418320+ >KJC3_008573-T1 ID=KJC3_008573-T1|Name=KJC3_008573-T1|organism=Aspergillus niger KJC3|type=CDS|length=5640bp|location=Sequence derived from alignment at ch6:2415042..2418320+ (Aspergillus niger KJC3)
ATGCAAGCCAACACAAGACATAGATCGACCTTGCCGATCTACGGTCCCGA
TCGCAAGAACATCAAGAAGTCTCAGATCAAATTCATTCGTCCAGCACAGA
TGAGTTTGCTTGCTCGAGTGACGTGCTATCCTCCCTTGGGCCAGATAACA
TGTCACCAAAGGAGGTCCGGGAGCTCGGGATCCACGGAACCTGATACGAT
CAATTTCACCGTAGTGCTAGAATCAAGCACCTCATTTCCAGTGCAGCCCT
GGGATATCCAAATATGGCACAACATCTCTAGTTCTGAGTGGACCGCAACG
TCACTCAAGAGTCACGGATCTCCTGTGGCACCACTCATGAACGGCAGCGA
GGAAGACTATAACTACTTCCGTAATGTCTTTTCAGGGAAGATAACTCTCC
CTTCAAATGCCGGGCATGCACAATTCACTGTTCGCTATCGAATTAATCCT
GATGCCGAATGGCAATGGGTGAACCAGCAACAGGGTGCAAATGATGGGGT
ATTGGTATTTGGCTCACAAAAGCCCGAGTTCACTTCGCTCGAGACGACTC
CAACAGATTTCAAAAAGTATTTCGAGGGAATGTCTGCGGATATCAGCATT
GAGCCAAGAAAAAGCGAATCACCCGGTTCGAACTTGTGGCATCTTTCCGG
GAAAGCTCAGCCAGCTCATGCAGGCGAATCTGGATACAAAGAGGTGGCCC
TCGGAGTGCCAATGTCAATTCTGCGGTATTTCTCCTTGGTGCGCATCTGG
ACTCCATGGCTCGGTCCAAGGCATGGACAAGGGAAATTTGAATTGTCCGA
GGAAGCCATTTTGTGCTCCTTTCTGCGGACTGACGGAGTGAATATTGTGC
TTCTTGGGTTGTCCGGCAAGGATAATATCTTGACGACTTTTGGATCAGGC
GAAAATGGGGAAGTAATCGTCAAATCCCTCAATGACAATGCAGAGCCATC
TACATTCCAAATACTGGCTTCAGCTGCGGAGGATTATGAGGTTGCAATGA
GCGCGATCGTATACGAAGCTCGCAAGCTCGCAAGACCATATGCCGAGCAA
GAGGCGTCCGATACCAAGCGGGCCCCAGTTTCGCCACCCCCGGACGATAT
AGTGGTGGTAGAAAAGGATGTGAAGGCTCAGTGGATGGCTGAGTGGTACG
ATGGCTTAACCTACTGCACGTGGAACGGACTAGGTCAGGATTTGACGGAA
GAGAAAATTCTTCGTGGTCTTGACTCACTGAAGTCTCATGGGATCCAGAT
AGCTAACTTGATCATTGACGACAACTGGCAAACACTAGACGATGCCGAAT
CACAGTTCAAGAGGGGCTGGAGGCAGTTCGAAGGAAACCCAGCTGCCTTT
CCCAAAGGGTTCAAACAGACCATTGAAGCCATCCGTCAGAGGCATCCGAA
CGTCGAACACATCGCAGTTTGGCATGCAATCCTCGGATACTGGGGAGGAA
TTTCAGCGGAAGGTGATCTTGCTAAGAAATACAAGACCAAGAGAGTTGAG
ATCAAAGTGCCTGCTGTGGGAGGCGCTATCTCGCATGCGTTTGAGAATGG
CTCAGTGCTGGCAATTGACCCGGATGACGTTCAAAAATTCTACGACGATT
TCTATAGATATCTTGCCTCAATTGGAGTCGACTCCGTCAAGGCAGACGCC
CAGTTCTTTCTCGATTTGATCAAAGACCCAGAGGACCGGAGAAGATTTAT
CACCGCTTACCAGGACGCATGGTCTATCTCCACGTTGAAACACTTCAGCT
CAAGGGCTATATCCTGCATGTCAATGTTCCCACAAGCCATCTTCCACTCA
CAGCTTCCAACGACCAAGCCTACTATTCCCCTCCGGAACTCAGACGACTT
CTTCCCCAACATCGAATCGTCTCATCCATGGCATATCTTTTGCAACGCCC
ACAACGCCCTGCTGACCCGCTACCTGAACGTCGTCCCCGACTGGGACATG
TTCCAAACAAGCCACCCGTACGCCGGTTTCCACGCCGCGGCACGCTGCGT
CTCCGGAGGCCCAGTATACATCACCGACGAACCCGGTAAGCACGACGTCT
CCCTGATCGACCAAATGACCGCCAAAACGATACACGACGGAACCGTCATC
CTCCGCCCAAGCTTGATCGGCCGTGCCATGGACATCTACCACGACTACAA
AGAAGGCCACATAGTGCGCGTAGGCACCTACACCGGCTGGGCCCGAACCG
GCAGCGGCATCCTAGGTCTCTTCAACATCTCCACCGCCGAGAAATCCACC
ATAACCCACCTCTTAGACTTCCCAGGAATCCACCAAGACTCTCAAGGCGA
GTACATCATCCGCGCTCACACCAGCGGCATGATCGCCTCGGACCTACGCG
TCCCGGACACGGAATCATCCCTAGTGACGGTGACTTTGCCCCCGAAGGGC
TGGGAAATCTTAACAACCTACCCAACATACACCTTCGACCTGAAGGCCAA
CAAACGAGCCTCCACCTCAACGCCCACAGAAACGAAAGTATCAGTCCTAG
GCCTAGTCGGCAAAATGACCGGCGCAGCAGCAATCATCTTCTCTGATATC
TACGTCGAAGATAACGGAAGACTGCGGTTCGACATTAGTCTCAAGGCGCT
GGGCACATTAGGGATCTATTTCTCCGACTTGCCGGACTGGAGTATTGATG
ATAACTTCATGGTCATGATTCTGGGGAGACCTGTGCCGAAGAAAACTGTT
TGGAAGGAAGGTGGTGATAAGGGGAGGGTGGTGGCGGTGGATATTCTGAC
TGCCTGGAAGGAGATGGGGTTGAAGGCTGGGTGGAGTAATGATGTGCTTG
TTGAGGTGTTTGTTGGTTGAATGCAAGCCAACACAAGACATAGATCGACC
TTGCCGATCTACGGTCCCGATCGCAAGAACATCAAGAAGTCTCAGATCAA
ATTCATTCGTCCAGCACAGATGAGTTTGCTTGCTCGAGTGACGTGCTATC
CTCCCTTGGGCCAGATAACATGTCACCAAAGGAGGTCCGGGAGCTCGGGA
TCCACGGAACCTGATACGATCAATTTCACCGTAGTGCTAGAATCAAGCAC
CTCATTTCCAGTGCAGCCCTGGGATATCCAAATATGGCACAACATCTCTA
GTTCTGAGTGGACCGCAACGTCACTCAAGAGTCACGGATCTCCTGTGGCA
CCACTCATGAACGGCAGCGAGGAAGACTATAACTACTTCCGTAATGTCTT
TTCAGGGAAGATAACTCTCCCTTCAAATGCCGGGCATGCACAATTCACTG
TTCGCTATCGAATTAATCCTGATGCCGAATGGCAATGGGTGAACCAGCAA
CAGGGTGCAAATGATGGGGTATTGGTATTTGGCTCACAAAAGCCCGAGTT
CACTTCGCTCGAGACGACTCCAACAGATTTCAAAAAGTATTTCGAGGGAA
TGTCTGCGGATATCAGCATTGAGCCAAGAAAAAGCGAATCACCCGGTTCG
AACTTGTGGCATCTTTCCGGGAAAGCTCAGCCAGCTCATGCAGGCGAATC
TGGATACAAAGAGGTGGCCCTCGGAGTGCCAATGTCAATTCTGCGGTATT
TCTCCTTGGTGCGCATCTGGACTCCATGGCTCGGTCCAAGGCATGGACAA
GGGAAATTTGAATTGTCCGAGGAAGCCATTTTGTGCTCCTTTCTGCGGAC
TGACGGAGTGAATATTGTGCTTCTTGGGTTGTCCGGCAAGGATAATATCT
TGACGACTTTTGGATCAGGCGAAAATGGGGAAGTAATCGTCAAATCCCTC
AATGACAATGCAGAGCCATCTACATTCCAAATACTGGCTTCAGCTGCGGA
GGATTATGAGGTTGCAATGAGCGCGATCGTATACGAAGCTCGCAAGCTCG
CAAGACCATATGCCGAGCAAGAGGCGTCCGATACCAAGCGGGCCCCAGTT
TCGCCACCCCCGGACGATATAGTGGTGGTAGAAAAGGATGTGAAGGCTCA
GTGGATGGCTGAGTGGTACGATGGCTTAACCTACTGCACGTGGAACGGAC
TAGGTCAGGATTTGACGGAAGAGAAAATTCTTCGTGGTCTTGACTCACTG
AAGTCTCATGGGATCCAGATAGCTAACTTGATCATTGACGACAACTGGCA
AACACTAGACGATGCCGAATCACAGTTCAAGAGGGGCTGGAGGCAGTTCG
AAGGAAACCCAGCTGCCTTTCCCAAAGGGTTCAAACAGACCATTGAAGCC
ATCCGTCAGAGGCATCCGAACGTCGAACACATCGCAGTTTGGCATGCAAT
CCTCGGATACTGGGGAGGAATTTCAGCGGAAGGTGATCTTGCTAAGAAAT
ACAAGACCAAGAGAGTTGAGATCAAAGTGCCTGCTGTGGGAGGCGCTATC
TCGCATGCGTTTGAGAATGGCTCAGTGCTGGCAATTGACCCGGATGACGT
TCAAAAATTCTACGACGATTTCTATAGATATCTTGCCTCAATTGGAGTCG
ACTCCGTCAAGGCAGACGCCCAGTTCTTTCTCGATTTGATCAAAGACCCA
GAGGACCGGAGAAGATTTATCACCGCTTACCAGGACGCATGGTCTATCTC
CACGTTGAAACACTTCAGCTCAAGGGCTATATCCTGCATGTCAATGTTCC
CACAAGCCATCTTCCACTCACAGCTTCCAACGACCAAGCCTACTATTCCC
CTCCGGAACTCAGACGACTTCTTCCCCAACATCGAATCGTCTCATCCATG
GCATATCTTTTGCAACGCCCACAACGCCCTGCTGACCCGCTACCTGAACG
TCGTCCCCGACTGGGACATGTTCCAAACAAGCCACCCGTACGCCGGTTTC
CACGCCGCGGCACGCTGCGTCTCCGGAGGCCCAGTATACATCACCGACGA
ACCCGGTAAGCACGACGTCTCCCTGATCGACCAAATGACCGCCAAAACGA
TACACGACGGAACCGTCATCCTCCGCCCAAGCTTGATCGGCCGTGCCATG
GACATCTACCACGACTACAAAGAAGGCCACATAGTGCGCGTAGGCACCTA
CACCGGCTGGGCCCGAACCGGCAGCGGCATCCTAGGTCTCTTCAACATCT
CCACCGCCGAGAAATCCACCATAACCCACCTCTTAGACTTCCCAGGAATC
CACCAAGACTCTCAAGGCGAGTACATCATCCGCGCTCACACCAGCGGCAT
GATCGCCTCGGACCTACGCGTCCCGGACACGGAATCATCCCTAGTGACGG
TGACTTTGCCCCCGAAGGGCTGGGAAATCTTAACAACCTACCCAACATAC
ACCTTCGACCTGAAGGCCAACAAACGAGCCTCCACCTCAACGCCCACAGA
AACGAAAGTATCAGTCCTAGGCCTAGTCGGCAAAATGACCGGCGCAGCAG
CAATCATCTTCTCTGATATCTACGTCGAAGATAACGGAAGACTGCGGTTC
GACATTAGTCTCAAGGCGCTGGGCACATTAGGGATCTATTTCTCCGACTT
GCCGGACTGGAGTATTGATGATAACTTCATGGTCATGATTCTGGGGAGAC
CTGTGCCGAAGAAAACTGTTTGGAAGGAAGGTGGTGATAAGGGGAGGGTG
GTGGCGGTGGATATTCTGACTGCCTGGAAGGAGATGGGGTTGAAGGCTGG
GTGGAGTAATGATGTGCTTGTTGAGGTGTTTGTTGGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008573-T1.utr5p1 | KJC3_008573-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008573-T1.utr3p1 | KJC3_008573-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR008811 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2415042..2418320 + |
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