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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2441724..2443611+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008583-T1 ID=KJC3_008583-T1|Name=KJC3_008583-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1888bp|location=Sequence derived from alignment at ch6:2441724..2443611+ (Aspergillus niger KJC3)
CTATTCCTCGTTCCCTGCACGGAGCCCAGATCGGACGAACCGGCTCCATC
GGCTGCTTAAATACAGAATGAAGATCACTTCCTTCTGAAAAAACAAACCT
TTCCGTTCTTTTCATCATCAAGATGCGTCTTTCACTTCTCCTGGCGGGCG
CCATTAACCTGGTTGCTACCCAGGCTATCGCAACTTCGCGTTGTACTCCT
GAGACCTTCACTCCCCATCTTTCTTCCAACGCCTCTCTCGTTTACGCAGT
TCCATATGGATCCAACGATACCTTTGTTGGCCCGCTGGGCAACTACTCCG
GTCTCCCAGAGTACTGCGCCGTCTACGTCAACGTGAGCTCGTCTGCTACC
TCGTCCTACGAATTCGGCCTTTGGCTGCCCATCAACACTTGGAACAAGCG
CTACATGGCCTATGGCAATGGTGGCTTCACTGGCATGATCGCCTTTGCTG
ATATGGCACCCGGTCTTTTCTACGGCTTTGCTACCGTTTCCACAAACACT
GGACACAACTCCTCCGTGACTGAGGCTGGCGATGCAGGCTGGGCTCTCAA
CGACCCTGAGACTCGTACTGACTGGGGATGGCGTGCACTCCATGGCTCTG
TCGCTCTTGGCAAGGAGCTTACTGAGGCCTTCTACAGCGAAGATATCAGC
TATTCCTACTACGCCGGTTGCTCCACGGGCGGTCGCCAGGGTCTGAAGTC
CGTCCAGATGTTCCCTGACGACTTCGATGGTGTCCTCGCCGGTGCTTGCG
CTTGGTGGACCACCCATCAGCAAAACTGGGATCTCAAGCTCGCCACCTAC
AACCTCCCCAACAATGCCAGCCACCATATCACCGAGACTCAGGTGGATGC
TTTGGCCACTGAAGTCCTCCGTCAGTGCGACGAAGTTGATGGCGTCAAGG
ATAACATTATCATGAACGGCTATGCCTGCGACTTCCGTCCTGAGACCCTT
CTTTGTGACGGTCCCTCCGCCAACAAGTCGACCTGTTTCACCGCCGATCA
GATCGACACTGTCTACAAGATCTACAGCCCCTGGGTTGAGACCAACGACT
CCTTTGTCTTCCCCAGCTTCGCCTACGGTGCCGAAACCCAGTTCGCTCAG
ATGATCATGACCGACGACGACGAGCAGGACAGCCCCAGTGGTATTGCCTA
CCCCCGTGACTTTGTCTACAACGATGCCAACTGGCCTTGGCAAAACCTGG
ACTACTCGACCATTGAGCTGTCCGATCGACTGGACCCCGGTAATGCCACC
GCCGGTGACTTCGATCTCCGTCCCTTTAAGAACAAGGGTGGTAAGCTGAT
CCATTACCACGGATTTGCTGACGGAGAGATCCCCACTGGCTCCAGCATCT
ACTACTACAAGCAGGTCCAGAAGATGCTTACCCCTCTTGGCATCGACCTC
GACGACTTCTACCGCTTCTTCTTGATCCCTGGTATGGAGCACTGCTTGGA
CTCCGTCCACGATGCTCCGTGGTACATCGCCTCGGCTAACCAGCCCGGCG
GCCTGACCGGCACCAATGTCTGGGGTGTGCCTGGTTACCGTGACCGGAAG
CACGATGCCATCCTGGCTTTGATGGCCTGGGTGGAGAATGGCATCGCTCC
TGATGAGCTGATCGCAACCAAGTTCGTTGATGACACCCCGGCGGAAGGTG
TGCAGGCTCAGCGCCCTCTCTGCGTCTACCCCAAGGAGGCCAAGTATGTT
GGAGGTAACTGGAACAAGACCACCGCGTTCGAGTGCCGGTAATTTGATTA
TTCTGAGGGTCTCTCCAAGCGGGCTTGTTACTTCTAGGGAGCATGCAACC
CGAGGATACATAATATCTCTTCTATGTATAATAGATTCATCTCGAGTATA
TATTGACTCCTATATAATTCTTATTATGGAATTTTTCT back to topCoding sequence (CDS) from alignment at ch6:2441724..2443611+ >KJC3_008583-T1 ID=KJC3_008583-T1|Name=KJC3_008583-T1|organism=Aspergillus niger KJC3|type=CDS|length=1620bp|location=Sequence derived from alignment at ch6:2441724..2443611+ (Aspergillus niger KJC3)
ATGCGTCTTTCACTTCTCCTGGCGGGCGCCATTAACCTGGTTGCTACCCA
GGCTATCGCAACTTCGCGTTGTACTCCTGAGACCTTCACTCCCCATCTTT
CTTCCAACGCCTCTCTCGTTTACGCAGTTCCATATGGATCCAACGATACC
TTTGTTGGCCCGCTGGGCAACTACTCCGGTCTCCCAGAGTACTGCGCCGT
CTACGTCAACGTGAGCTCGTCTGCTACCTCGTCCTACGAATTCGGCCTTT
GGCTGCCCATCAACACTTGGAACAAGCGCTACATGGCCTATGGCAATGGT
GGCTTCACTGGCATGATCGCCTTTGCTGATATGGCACCCGGTCTTTTCTA
CGGCTTTGCTACCGTTTCCACAAACACTGGACACAACTCCTCCGTGACTG
AGGCTGGCGATGCAGGCTGGGCTCTCAACGACCCTGAGACTCGTACTGAC
TGGGGATGGCGTGCACTCCATGGCTCTGTCGCTCTTGGCAAGGAGCTTAC
TGAGGCCTTCTACAGCGAAGATATCAGCTATTCCTACTACGCCGGTTGCT
CCACGGGCGGTCGCCAGGGTCTGAAGTCCGTCCAGATGTTCCCTGACGAC
TTCGATGGTGTCCTCGCCGGTGCTTGCGCTTGGTGGACCACCCATCAGCA
AAACTGGGATCTCAAGCTCGCCACCTACAACCTCCCCAACAATGCCAGCC
ACCATATCACCGAGACTCAGGTGGATGCTTTGGCCACTGAAGTCCTCCGT
CAGTGCGACGAAGTTGATGGCGTCAAGGATAACATTATCATGAACGGCTA
TGCCTGCGACTTCCGTCCTGAGACCCTTCTTTGTGACGGTCCCTCCGCCA
ACAAGTCGACCTGTTTCACCGCCGATCAGATCGACACTGTCTACAAGATC
TACAGCCCCTGGGTTGAGACCAACGACTCCTTTGTCTTCCCCAGCTTCGC
CTACGGTGCCGAAACCCAGTTCGCTCAGATGATCATGACCGACGACGACG
AGCAGGACAGCCCCAGTGGTATTGCCTACCCCCGTGACTTTGTCTACAAC
GATGCCAACTGGCCTTGGCAAAACCTGGACTACTCGACCATTGAGCTGTC
CGATCGACTGGACCCCGGTAATGCCACCGCCGGTGACTTCGATCTCCGTC
CCTTTAAGAACAAGGGTGGTAAGCTGATCCATTACCACGGATTTGCTGAC
GGAGAGATCCCCACTGGCTCCAGCATCTACTACTACAAGCAGGTCCAGAA
GATGCTTACCCCTCTTGGCATCGACCTCGACGACTTCTACCGCTTCTTCT
TGATCCCTGGTATGGAGCACTGCTTGGACTCCGTCCACGATGCTCCGTGG
TACATCGCCTCGGCTAACCAGCCCGGCGGCCTGACCGGCACCAATGTCTG
GGGTGTGCCTGGTTACCGTGACCGGAAGCACGATGCCATCCTGGCTTTGA
TGGCCTGGGTGGAGAATGGCATCGCTCCTGATGAGCTGATCGCAACCAAG
TTCGTTGATGACACCCCGGCGGAAGGTGTGCAGGCTCAGCGCCCTCTCTG
CGTCTACCCCAAGGAGGCCAAGTATGTTGGAGGTAACTGGAACAAGACCA
CCGCGTTCGAGTGCCGGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008583-T1.utr5p1 | KJC3_008583-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008583-T1.utr3p1 | KJC3_008583-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-16) |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR011118 |
| DBxref | PFAM:PF07519 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2441724..2443611 + |
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