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KJC3_008603-T1, KJC3_008603-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008603-T1
Unique NameKJC3_008603-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2485739..2486874-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008603-T1 ID=KJC3_008603-T1|Name=KJC3_008603-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1136bp|location=Sequence derived from alignment at ch6:2485739..2486874- (Aspergillus niger KJC3)
ATGGAGGCCCGACAAGGATCAAATGGACGGACTGCCTTGCATATCGCTGC
GGCTCGCGGTAGTATTGAGGATATGGTATTGTTGCTGGAGAACGGGGCTG
ACGTCAATATCAGTAGTGCCGAAGGCTTGACAGCACTAGATTTGGCTGCA
ATACAAGGCAACCTGGAGATGGTGACTCTACTTCTTGACCACAACGCCAA
AGTTGATACGCTGGGAATTCGCAAGATGACGCCTTTGGATCAGGTGATAA
TGGCAATGATAACAACAAGGATCGCCCGCGTATCATTGAACTTCTCCTGC
AACGCAAGCCCGACTTACTCCTGCACAAATCTGCGTCTAACCTTCTCATG
GAAGAGGTCACTACCATGGGAATGGCTGTCTGTCTGGGGACTCCGGAAAT
GGTGCGGGTATTGCTTCGCTATCCAGGCAGCGATGCCAAGCAAAGCGTCC
TCCGTATGCCTCTCTTGTGCTGGGCTGCAGTTCAGAGCAAAGCGGACATG
GTCGAGACGCTGATACAGCAGGGCGTATCACTCCAGGAGGTTGACGGCCG
CTATGGGCGAAACGCACTTTCCTGGGCCGTGATCAAGGGCAAACAAGACA
TAGTTACACGATTGCTGCAGACCCCCGGCGTTGGATGGGATGACGTTGAT
CAACAAGGCCGGTCGGCGCTTTTCCACGCGGCAGTCACCGGCAATGAAGA
GATGTTTGAAGAACTTCGATCCCGTGGCAGCGCTGTGCATCGCCCTGACC
AATTTGGGTTCACTCCTCTATTTGTCGCGGTTCAGCACGGCCGGGAGAGT
CTAGTTCGGAGGATCCTCGGGGACCATCCGCTGACACAGGAGCCTCGTGA
TGGCTCTGGTCGCAGTCTGTCGTGGTGGATACGATCGACGGGAAATGATG
CTTTGCGAGAAACCATCGTCGGTTACGGTATGCAGCTGGGAGGGCAGGTT
TTAATAGAAGAAAGCCATTCATATCTTCGTTATGAATCGAGCCGGTCGTC
CCAGGACTGTGACATTTGTACCCTTCCTCTGAACCGGGATAATCGAGGTA
TTGAATGTGGCTCGGGATGCAGGAAATATCGCATTTGCCACATCTGCAGT
CAGTTTGGTGCGAGCTGCAAGGATTTTGCCGAGTGA
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Coding sequence (CDS) from alignment at ch6:2485739..2486874-

>KJC3_008603-T1 ID=KJC3_008603-T1|Name=KJC3_008603-T1|organism=Aspergillus niger KJC3|type=CDS|length=2142bp|location=Sequence derived from alignment at ch6:2485739..2486874- (Aspergillus niger KJC3)
CCCGACTTACTCCTGCACAAATCTGCGTCTAACCTTCTCATGGAAGAGGT
CACTACCATGGGAATGGCTGTCTGTCTGGGGACTCCGGAAATGGTGCGGG
TATTGCTTCGCTATCCAGGCAGCGATGCCAAGCAAAGCGTCCTCCGTATG
CCTCTCTTGTGCTGGGCTGCAGTTCAGAGCAAAGCGGACATGGTCGAGAC
GCTGATACAGCAGGGCGTATCACTCCAGGAGGTTGACGGCCGCTATGGGC
GAAACGCACTTTCCTGGGCCGTGATCAAGGGCAAACAAGACATAGTTACA
CGATTGCTGCAGACCCCCGGCGTTGGATGGGATGACGTTGATCAACAAGG
CCGGTCGGCGCTTTTCCACGCGGCAGTCACCGGCAATGAAGAGATGTTTG
AAGAACTTCGATCCCGTGGCAGCGCTGTGCATCGCCCTGACCAATTTGGG
TTCACTCCTCTATTTGTCGCGGTTCAGCACGGCCGGGAGAGTCTAGTTCG
GAGGATCCTCGGGGACCATCCGCTGACACAGGAGCCTCGTGATGGCTCTG
GTCGCAGTCTGTCGTGGTGGATACGATCGACGGGAAATGATGCTTTGCGA
GAAACCATCGTCGGTTACGGTATGCAGCTGGGAGGGCAGGTTTTAATAGA
AGAAAGCCATTCATATCTTCGTTATGAATCGAGCCGGTCGTCCCAGGACT
GTGACATTTGTACCCTTCCTCTGAACCGGGATAATCGAGGTATTGAATGT
GGCTCGGGATGCAGGAAATATCGCATTTGCCACATCTGCAGTCAGTTTGG
TGCGAGCTGCAAGGATTTTGCCGAGTGAATGGAGGCCCGACAAGGATCAA
ATGGACGGACTGCCTTGCATATCGCTGCGGCTCGCGGTAGTATTGAGGAT
ATGGTATTGTTGCTGGAGAACGGGGCTGACGTCAATATCAGTAGTGCCGA
AGGCTTGACAGCACTAGATTTGGCTGCAATACAAGGCAACCTGGAGATGG
TGACTCTACTTCTTGACCACAACGCCAAAGTTGATACGCTGGGAATTCGC
AAGATGACGCCTTTGGATCAGCCCGACTTACTCCTGCACAAATCTGCGTC
TAACCTTCTCATGGAAGAGGTCACTACCATGGGAATGGCTGTCTGTCTGG
GGACTCCGGAAATGGTGCGGGTATTGCTTCGCTATCCAGGCAGCGATGCC
AAGCAAAGCGTCCTCCGTATGCCTCTCTTGTGCTGGGCTGCAGTTCAGAG
CAAAGCGGACATGGTCGAGACGCTGATACAGCAGGGCGTATCACTCCAGG
AGGTTGACGGCCGCTATGGGCGAAACGCACTTTCCTGGGCCGTGATCAAG
GGCAAACAAGACATAGTTACACGATTGCTGCAGACCCCCGGCGTTGGATG
GGATGACGTTGATCAACAAGGCCGGTCGGCGCTTTTCCACGCGGCAGTCA
CCGGCAATGAAGAGATGTTTGAAGAACTTCGATCCCGTGGCAGCGCTGTG
CATCGCCCTGACCAATTTGGGTTCACTCCTCTATTTGTCGCGGTTCAGCA
CGGCCGGGAGAGTCTAGTTCGGAGGATCCTCGGGGACCATCCGCTGACAC
AGGAGCCTCGTGATGGCTCTGGTCGCAGTCTGTCGTGGTGGATACGATCG
ACGGGAAATGATGCTTTGCGAGAAACCATCGTCGGTTACGGTATGCAGCT
GGGAGGGCAGGTTTTAATAGAAGAAAGCCATTCATATCTTCGTTATGAAT
CGAGCCGGTCGTCCCAGGACTGTGACATTTGTACCCTTCCTCTGAACCGG
GATAATCGAGGTATTGAATGTGGCTCGGGATGCAGGAAATATCGCATTTG
CCACATCTGCAGTCAGTTTGGTGCGAGCTGCAAGGATTTTGCCGAGTGAA
TGGAGGCCCGACAAGGATCAAATGGACGGACTGCCTTGCATATCGCTGCG
GCTCGCGGTAGTATTGAGGATATGGTATTGTTGCTGGAGAACGGGGCTGA
CGTCAATATCAGTAGTGCCGAAGGCTTGACAGCACTAGATTTGGCTGCAA
TACAAGGCAACCTGGAGATGGTGACTCTACTTCTTGACCACAACGCCAAA
GTTGATACGCTGGGAATTCGCAAGATGACGCCTTTGGATCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008603KJC3_008603Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008603-T1KJC3_008603-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008603-T1.cdsKJC3_008603-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008603-T1.exon2KJC3_008603-T1.exon2Aspergillus niger KJC3exon
KJC3_008603-T1.exon1KJC3_008603-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2485739..2486874 -
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