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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2524466..2526604+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008620-T1 ID=KJC3_008620-T1|Name=KJC3_008620-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2139bp|location=Sequence derived from alignment at ch6:2524466..2526604+ (Aspergillus niger KJC3)
ATGATTGACCCCCTCAGTTTGCTGGTCCTTTTTGGTGTAGCTGGCAGCAG
CCAGCTCGCTTACGCATCGCCCGTGACGCAGAAAGCTGAGGCTACAAGGG
CAACTTCATACTCCTACAGTTCTTTTACCTACACGCAGGTCACTTCAACT
CGCTATGCTACTTCACTGAGTGCACCGCTGTCTTTTGCTACCCCATTCGC
TCCAGCATTTAGCAAGGCGTCAACTCTGCTTCCCAGTAACGTGACCTATA
CAACATACTCCTTGCAGCCAAGCCAGACTCTCTCCCCAGACGGAGAATAT
GGCCAGAGTGCGTATGCTGCGTTGTGGGCCAACCTGTCGTATACTTCTGC
GCCTCCAATCACAACTACCGTCTCCCCTACACCAGTACCCTCTAGCGAGC
TGGTATACCCTCCAACTCTGTACAACAGAATTGATTATGCAGACCTGAAG
CTCCCATCTGATTTTATTTGGGGCGTCGCAGCCAGCGCATGGCAGATCGA
AGGAGGCCTCAAGCTCGAAGGCCGCGGCACATCTATCCTCGACACCATCG
GCGCTATCCAGAGTGACGACAACTCCTCAGATGCCAACATCGCCGACCTA
AGCTACTATATGTACAAACAGGACATTGCGCGACTAGCCGCCATAGGCAT
CCCATACCTCTCCTTCAGCATCTCCTGGCCACGCATCGTCCCTTTCGGCG
TAGCCAACTCACCCGTCAACACCGAGGGACTCCAGCACTACGACGATGTG
ATTAACACCTGTCTTCAATACGGCATCACCCCTATCGTAACCCTAAACCA
CGTCGACTTCCCGACAGCCCAAGCAGCCGACTACTCCACCCTCACGGACA
ACTTCCTCTACTATGCGAAGCAAGTAATGACCCGCTACGCAGACCGGGTC
CCCTACTGGGTGACCTTCAACGAGCCCAACATTGGCATCGGCAACAGCTT
CACCTCCTACAACGACCTCACGCACGTCCTAACCGCACACGCGGCCGTCT
ACCACTGGTACAAAGAGGAACTGCAAGGCACGGGCCAAATTACCATGAAG
TTCGCCAACAATCTCGGCGTTCCCCTGGATCCCTCCAACAGCAGCCACGT
CGACGCCGCCCTCCGATACCAAGACTTCATCCTGGGAATTATGGCCAACC
CATTATTCCTCGGCGAACAATACCCCTCGACTGTCCTCAACACGCCTAAC
CTTAACCTCACCCCACTCACCCAAACCCAACTCTCTACTATCAACAACAC
CGTCGACTTCTGGGCCTTCGACCCCTACGTCGCGCAATTCGCCCTCCCCC
CTCTAGAAGGAATCTCCGCCTGCGCAGCCAACTCTTCCAACAGCGCCTGG
CCCGAATGCGCCACTCTAACCATGATCCAATCCGACGGATGGCTGATGGG
CGACATGTCTAATGCATATTCCTCCATCGCGCCACAGTACGTCCGCCAGC
AACTAGGGTATGTCTGGAACACATTCAGGCCGTCAGGGATAGTGATCGCA
GAGTTTGGATTCAACCCATTCGACGAATCGTTAAAGGAGGGCAACGCCCA
GCGATATGATTTGGAACGTACGCTATATTACCAGGACTTCCTGGAGGAGA
TGCTGAAGGCGATTCATGAGGACGGAGTGAACGTGATTGGAACGCTGGCG
TGGAGTTATCTGGATAACAATGAGTTCGGGAGCTATGGGAACCAGTATGG
AATGCAGAGTGTGAATCGCACGGATGGGACGTGGGAGAGGAGGTATAAGA
GGAGTATTTTCGATTATGTGGATTTTTTCCACGAGCATGTTAGCAGTTAG
ATAGGGTTGCTCTCTTTGCAACTCGTTACGAGGAACTGAAAGGCAGTGAG
GCAGGCAATGCCTCGTTAGATATAGAATAGAGGGGAGTGAGTTACCTCAA
TCGATAGAAGACTACATTCAACGCTTGTGCGTGCTGCTCCCATGTTCAAT
GCTATTCAATTCTACCATGATGGTATACACACATCCTCAATGTTTTTAGA
ATCAAGTGGAACTTGTACACCATCCTACACACAATATCTCATCAAACCTA
TATAATACTTCAAATAGTCCACTCCACATACACCCCCGACGAAAAGAATA
GTTCCATCAAGTTACTCAGTTCTACTAAAAAACAACTTA back to topCoding sequence (CDS) from alignment at ch6:2524466..2526604+ >KJC3_008620-T1 ID=KJC3_008620-T1|Name=KJC3_008620-T1|organism=Aspergillus niger KJC3|type=CDS|length=1800bp|location=Sequence derived from alignment at ch6:2524466..2526604+ (Aspergillus niger KJC3)
ATGATTGACCCCCTCAGTTTGCTGGTCCTTTTTGGTGTAGCTGGCAGCAG
CCAGCTCGCTTACGCATCGCCCGTGACGCAGAAAGCTGAGGCTACAAGGG
CAACTTCATACTCCTACAGTTCTTTTACCTACACGCAGGTCACTTCAACT
CGCTATGCTACTTCACTGAGTGCACCGCTGTCTTTTGCTACCCCATTCGC
TCCAGCATTTAGCAAGGCGTCAACTCTGCTTCCCAGTAACGTGACCTATA
CAACATACTCCTTGCAGCCAAGCCAGACTCTCTCCCCAGACGGAGAATAT
GGCCAGAGTGCGTATGCTGCGTTGTGGGCCAACCTGTCGTATACTTCTGC
GCCTCCAATCACAACTACCGTCTCCCCTACACCAGTACCCTCTAGCGAGC
TGGTATACCCTCCAACTCTGTACAACAGAATTGATTATGCAGACCTGAAG
CTCCCATCTGATTTTATTTGGGGCGTCGCAGCCAGCGCATGGCAGATCGA
AGGAGGCCTCAAGCTCGAAGGCCGCGGCACATCTATCCTCGACACCATCG
GCGCTATCCAGAGTGACGACAACTCCTCAGATGCCAACATCGCCGACCTA
AGCTACTATATGTACAAACAGGACATTGCGCGACTAGCCGCCATAGGCAT
CCCATACCTCTCCTTCAGCATCTCCTGGCCACGCATCGTCCCTTTCGGCG
TAGCCAACTCACCCGTCAACACCGAGGGACTCCAGCACTACGACGATGTG
ATTAACACCTGTCTTCAATACGGCATCACCCCTATCGTAACCCTAAACCA
CGTCGACTTCCCGACAGCCCAAGCAGCCGACTACTCCACCCTCACGGACA
ACTTCCTCTACTATGCGAAGCAAGTAATGACCCGCTACGCAGACCGGGTC
CCCTACTGGGTGACCTTCAACGAGCCCAACATTGGCATCGGCAACAGCTT
CACCTCCTACAACGACCTCACGCACGTCCTAACCGCACACGCGGCCGTCT
ACCACTGGTACAAAGAGGAACTGCAAGGCACGGGCCAAATTACCATGAAG
TTCGCCAACAATCTCGGCGTTCCCCTGGATCCCTCCAACAGCAGCCACGT
CGACGCCGCCCTCCGATACCAAGACTTCATCCTGGGAATTATGGCCAACC
CATTATTCCTCGGCGAACAATACCCCTCGACTGTCCTCAACACGCCTAAC
CTTAACCTCACCCCACTCACCCAAACCCAACTCTCTACTATCAACAACAC
CGTCGACTTCTGGGCCTTCGACCCCTACGTCGCGCAATTCGCCCTCCCCC
CTCTAGAAGGAATCTCCGCCTGCGCAGCCAACTCTTCCAACAGCGCCTGG
CCCGAATGCGCCACTCTAACCATGATCCAATCCGACGGATGGCTGATGGG
CGACATGTCTAATGCATATTCCTCCATCGCGCCACAGTACGTCCGCCAGC
AACTAGGGTATGTCTGGAACACATTCAGGCCGTCAGGGATAGTGATCGCA
GAGTTTGGATTCAACCCATTCGACGAATCGTTAAAGGAGGGCAACGCCCA
GCGATATGATTTGGAACGTACGCTATATTACCAGGACTTCCTGGAGGAGA
TGCTGAAGGCGATTCATGAGGACGGAGTGAACGTGATTGGAACGCTGGCG
TGGAGTTATCTGGATAACAATGAGTTCGGGAGCTATGGGAACCAGTATGG
AATGCAGAGTGTGAATCGCACGGATGGGACGTGGGAGAGGAGGTATAAGA
GGAGTATTTTCGATTATGTGGATTTTTTCCACGAGCATGTTAGCAGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008620-T1.utr3p1 | KJC3_008620-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-22) |
| Note | CAZy:GH1 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR001360 |
| DBxref | PFAM:PF00232 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2524466..2526604 + |
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