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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2568243..2571048- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008635-T1 ID=KJC3_008635-T1|Name=KJC3_008635-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2806bp|location=Sequence derived from alignment at ch6:2568243..2571048- (Aspergillus niger KJC3) CTTCGGCCCTCTCCTCTTCTGCAGGCATTCCTTTCCCTCGTTCGAGCTCC
AGGATGTCTCTCTGACTCCCTAACCGTTCCTCCCCCGTGATATGATCCAG
ATCGAGCACATCCTTGGTGCAGTCGGAGCTCCTAGCGCCAATCCCCCCCT
CTCCGGATAGTCCTCGTACCCTCGTTATCGCCCTACGTCTTCGAGTCTGA
CCCCGATCCGAGAATCTCATTGAGCTCCAACTGCTGTGCGGTGGACTGCG
CCTTTCATTCTTGAGGACTCAGGTTGCTCGGCCATTGCTGCCATGTCGAA
TCCTACGCAGCCTTTCGACTCTCGGCGGGCGACAAGCTACGGTCGACCTG
AGGAGCTCCATATTCCATCTGCGGGCCCCAATCTGCAGCGACAATCGATG
TCTCACGAATACCCCGCTGGTCAAGACAACCCTGTCCCTTCTATCAACGT
TCATTCATTGGGGTCACAACCGGGTCAGTATGGTGGTGGTGGAAGCAGCG
GCGCGAGCGGAGTACTCCCGGGAGCGCTTCAGCCGGGCAACGTCAACCGT
CCACCTGCAGTATCAGTCAACACTGCACCTTCGGCGCTACCAACCCTACC
AGAGCTGAATACCCCAATGCAGCCAACATCACAATCAGGACAACAGCCAC
CGTCTGCGCAACAACAGCAAACGCCCCAACAGCAGCAGCCGAATGCCCGC
GCCAGTATGGTCAACTCTCATGGGCATTCTAGATCCAGCCCAGCAGGGTT
TGAGCAGCCAAAATACAGACAGCCAGGCTCCTCTCCAGGCTCTGCATATC
CTCCCCATACTCCCCAGGGTACAAAATACTCGCCGTTGGGTCTAGCCGAC
ATCCGACCGACAGGAGACCTTCTGGGTGACCCAATCACCAGCTCCGGAAT
GGCACCGTTCAACGGGGATAATCCGGTACCTACCAATAGCAACTACATTG
CTCCTTGGCCCATATATTCTATGGATTGGTGTAAATGGCCTATTACGGGG
AGCTCCAGCTCGTTCGGGGGCAAAATCGCCTTGGGAAGCTACCTAGAGGA
CAACCACAACTACGTACGCATATACCTGCCACTTCCCCCTGGTCATCTTC
GCAGCTTCATATTGTGCTAATCTGGGGAATAGATACAAATTATAGATACT
CATTGGACACAACCAGACCCGGATACGCCGGACGCCGCTGCGGGGGAGAT
TAAACTCGACTATGTGAAGACCGCAGAGGCCACCCATTCGTATCCAGTAA
CACGGATCCTCTGGGAGCCGCCATCATCTCAGAAACAGTCTACCGATCTG
TTGGCCACATCTGGTGATCATCTGCGATTATGGTCTCTGCCAACGGCGCA
ACCCGTACCAAGTTCCAACTCCATTACGCGGTCGGCCAGCCAACACGCAC
CGACAGCGAAACTGTCGCCGCTGGCTTTGCTCTCAAATTCCAAGTCACCC
GAGCATACCGCTCCAATCACCTCATTGGACTGGAATACAATTTCCCCCAG
TCTGATCATTACCTCCAGTATCGATACCACCTGCACAATCTGGGATATTC
CCACCCTTACCGCCAAGACACAGCTGATCGCACATGACAAAGAGGTATAC
GATGTTCGATTCTGTGCGAATAGCGTGGACGTCTTTGTCAGCTGTGGTGC
TGATGGTAGTGTGCGCATGTTCGATCTCCGCAGCCTAGAACATAGCACTA
TCATCTACGAGCCCACCGAGAAGCATGAGAAGGGTAATGCCAATTCTTTC
TTTACCAGAACCTGAATAGTACACTAACGGGTACATGCACTAGTCCCCAC
TCCGGGCAATGGCAGTCCTTCTGGGCAAGCCCAGCCCGTATGGCCCCCGC
CTCTACTACGCATCGCTGGTATGTATCTGGTCGAGCTGGCTGGTTGCCAT
TGACACTGGACGCTAACTGTCATAGCATCGCCCCATGATTCCCACCTTCT
TGCCACTTTCTCGCAAGATTCCAACATTGTCCGGGTTCTAGATGTCCGGC
AGCCTGGACAGGCTCTTCTTGAACTGAAGGGCCACGGCTCCTCCATCAAC
TGCGTTGAGTGGTCGCCCAACCGCCGCGGAGTCCTGGCTTCTGGTGCGGA
CGACTGCTTCGTACTTCTGTGGGACCTCATCAACCAGCACAATGCGGCTC
CTGTGCCTCCCATGCCTCCCGTCCCGCATAATGCGGGCACGCCCGCGACA
CCCAGTGAGCGAGGTCCAGCCGCCGTGTGGCTCTGCGACAACGAAGTGTC
GAACATTAGCTGGTCGCCGCAGGGCGGTACCACGCCTGCCGGGCATCCGC
GCGACTGGCTCGGGGTCTGCGGTGGACGTGGACTATGGGGAGTGGCACTG
TAGCGCCATGGAGAAAAGCACCCTTAGACGACATGTTTTCCATCTTATAC
TACACCATCGTCTCGCGTTGATGTGTTTTCTTTTTTTCTTTTTTGTCGTT
ACTTTTTCTTTGGATTTTGCTGCCACCTTCGGTATCCCCCTCACGCTGTA
AAGAGACTTTTGGGATGTTGACTGGCATGGTATGAGTGAACGAATGAAAC
GAACTAGCGTATAGTCGAATGAGTACCTAGGTGTATTCCAGGGGCACTTG
GGTTGTGCTTTTTTTTCTCTTCTTCATACTCGTTTACAAGTGGATAAATC
AAACGTGGAGCGGAAGAAGCCGGGTATACTATAGCTACTACTCTCGCCAA
TCTATATACAACCTGCACCATTGACAAACATGAAGCATAAGTTACTAGGA
GGAATGAGCAGCTGCGGATTTGACTCGAAAGAAATAATGAATGAATAAAC
TTGGGA back to topCoding sequence (CDS) from alignment at ch6:2568243..2571048- >KJC3_008635-T1 ID=KJC3_008635-T1|Name=KJC3_008635-T1|organism=Aspergillus niger KJC3|type=CDS|length=7500bp|location=Sequence derived from alignment at ch6:2568243..2571048- (Aspergillus niger KJC3) CATCGCCCCATGATTCCCACCTTCTTGCCACTTTCTCGCAAGATTCCAAC ATTGTCCGGGTTCTAGATGTCCGGCAGCCTGGACAGGCTCTTCTTGAACT GAAGGGCCACGGCTCCTCCATCAACTGCGTTGAGTGGTCGCCCAACCGCC GCGGAGTCCTGGCTTCTGGTGCGGACGACTGCTTCGTACTTCTGTGGGAC CTCATCAACCAGCACAATGCGGCTCCTGTGCCTCCCATGCCTCCCGTCCC GCATAATGCGGGCACGCCCGCGACACCCAGTGAGCGAGGTCCAGCCGCCG TGTGGCTCTGCGACAACGAAGTGTCGAACATTAGCTGGTCGCCGCAGGGC GGTACCACGCCTGCCGGGCATCCGCGCGACTGGCTCGGGGTCTGCGGTGG ACGTGGACTATGGGGAGTGGCACTGTAGTCCCCACTCCGGGCAATGGCAG TCCTTCTGGGCAAGCCCAGCCCGTATGGCCCCCGCCTCTACTACGCATCG CTGATACAAATTATAGATACTCATTGGACACAACCAGACCCGGATACGCC GGACGCCGCTGCGGGGGAGATTAAACTCGACTATGTGAAGACCGCAGAGG CCACCCATTCGTATCCAGTAACACGGATCCTCTGGGAGCCGCCATCATCT CAGAAACAGTCTACCGATCTGTTGGCCACATCTGGTGATCATCTGCGATT ATGGTCTCTGCCAACGGCGCAACCCGTACCAAGTTCCAACTCCATTACGC GGTCGGCCAGCCAACACGCACCGACAGCGAAACTGTCGCCGCTGGCTTTG CTCTCAAATTCCAAGTCACCCGAGCATACCGCTCCAATCACCTCATTGGA CTGGAATACAATTTCCCCCAGTCTGATCATTACCTCCAGTATCGATACCA CCTGCACAATCTGGGATATTCCCACCCTTACCGCCAAGACACAGCTGATC GCACATGACAAAGAGGTATACGATGTTCGATTCTGTGCGAATAGCGTGGA CGTCTTTGTCAGCTGTGGTGCTGATGGTAGTGTGCGCATGTTCGATCTCC GCAGCCTAGAACATAGCACTATCATCTACGAGCCCACCGAGAAGCATGAG AAGGATGTCGAATCCTACGCAGCCTTTCGACTCTCGGCGGGCGACAAGCT ACGGTCGACCTGAGGAGCTCCATATTCCATCTGCGGGCCCCAATCTGCAG CGACAATCGATGTCTCACGAATACCCCGCTGGTCAAGACAACCCTGTCCC TTCTATCAACGTTCATTCATTGGGGTCACAACCGGGTCAGTATGGTGGTG GTGGAAGCAGCGGCGCGAGCGGAGTACTCCCGGGAGCGCTTCAGCCGGGC AACGTCAACCGTCCACCTGCAGTATCAGTCAACACTGCACCTTCGGCGCT ACCAACCCTACCAGAGCTGAATACCCCAATGCAGCCAACATCACAATCAG GACAACAGCCACCGTCTGCGCAACAACAGCAAACGCCCCAACAGCAGCAG CCGAATGCCCGCGCCAGTATGGTCAACTCTCATGGGCATTCTAGATCCAG CCCAGCAGGGTTTGAGCAGCCAAAATACAGACAGCCAGGCTCCTCTCCAG GCTCTGCATATCCTCCCCATACTCCCCAGGGTACAAAATACTCGCCGTTG GGTCTAGCCGACATCCGACCGACAGGAGACCTTCTGGGTGACCCAATCAC CAGCTCCGGAATGGCACCGTTCAACGGGGATAATCCGGTACCTACCAATA GCAACTACATTGCTCCTTGGCCCATATATTCTATGGATTGGTGTAAATGG CCTATTACGGGGAGCTCCAGCTCGTTCGGGGGCAAAATCGCCTTGGGAAG CTACCTAGAGGACAACCACAACTACCATCGCCCCATGATTCCCACCTTCT TGCCACTTTCTCGCAAGATTCCAACATTGTCCGGGTTCTAGATGTCCGGC AGCCTGGACAGGCTCTTCTTGAACTGAAGGGCCACGGCTCCTCCATCAAC TGCGTTGAGTGGTCGCCCAACCGCCGCGGAGTCCTGGCTTCTGGTGCGGA CGACTGCTTCGTACTTCTGTGGGACCTCATCAACCAGCACAATGCGGCTC CTGTGCCTCCCATGCCTCCCGTCCCGCATAATGCGGGCACGCCCGCGACA CCCAGTGAGCGAGGTCCAGCCGCCGTGTGGCTCTGCGACAACGAAGTGTC GAACATTAGCTGGTCGCCGCAGGGCGGTACCACGCCTGCCGGGCATCCGC GCGACTGGCTCGGGGTCTGCGGTGGACGTGGACTATGGGGAGTGGCACTG TAGTCCCCACTCCGGGCAATGGCAGTCCTTCTGGGCAAGCCCAGCCCGTA TGGCCCCCGCCTCTACTACGCATCGCTGATACAAATTATAGATACTCATT GGACACAACCAGACCCGGATACGCCGGACGCCGCTGCGGGGGAGATTAAA CTCGACTATGTGAAGACCGCAGAGGCCACCCATTCGTATCCAGTAACACG GATCCTCTGGGAGCCGCCATCATCTCAGAAACAGTCTACCGATCTGTTGG CCACATCTGGTGATCATCTGCGATTATGGTCTCTGCCAACGGCGCAACCC GTACCAAGTTCCAACTCCATTACGCGGTCGGCCAGCCAACACGCACCGAC AGCGAAACTGTCGCCGCTGGCTTTGCTCTCAAATTCCAAGTCACCCGAGC ATACCGCTCCAATCACCTCATTGGACTGGAATACAATTTCCCCCAGTCTG ATCATTACCTCCAGTATCGATACCACCTGCACAATCTGGGATATTCCCAC CCTTACCGCCAAGACACAGCTGATCGCACATGACAAAGAGGTATACGATG TTCGATTCTGTGCGAATAGCGTGGACGTCTTTGTCAGCTGTGGTGCTGAT GGTAGTGTGCGCATGTTCGATCTCCGCAGCCTAGAACATAGCACTATCAT CTACGAGCCCACCGAGAAGCATGAGAAGGATGTCGAATCCTACGCAGCCT TTCGACTCTCGGCGGGCGACAAGCTACGGTCGACCTGAGGAGCTCCATAT TCCATCTGCGGGCCCCAATCTGCAGCGACAATCGATGTCTCACGAATACC CCGCTGGTCAAGACAACCCTGTCCCTTCTATCAACGTTCATTCATTGGGG TCACAACCGGGTCAGTATGGTGGTGGTGGAAGCAGCGGCGCGAGCGGAGT ACTCCCGGGAGCGCTTCAGCCGGGCAACGTCAACCGTCCACCTGCAGTAT CAGTCAACACTGCACCTTCGGCGCTACCAACCCTACCAGAGCTGAATACC CCAATGCAGCCAACATCACAATCAGGACAACAGCCACCGTCTGCGCAACA ACAGCAAACGCCCCAACAGCAGCAGCCGAATGCCCGCGCCAGTATGGTCA ACTCTCATGGGCATTCTAGATCCAGCCCAGCAGGGTTTGAGCAGCCAAAA TACAGACAGCCAGGCTCCTCTCCAGGCTCTGCATATCCTCCCCATACTCC CCAGGGTACAAAATACTCGCCGTTGGGTCTAGCCGACATCCGACCGACAG GAGACCTTCTGGGTGACCCAATCACCAGCTCCGGAATGGCACCGTTCAAC GGGGATAATCCGGTACCTACCAATAGCAACTACATTGCTCCTTGGCCCAT ATATTCTATGGATTGGTGTAAATGGCCTATTACGGGGAGCTCCAGCTCGT TCGGGGGCAAAATCGCCTTGGGAAGCTACCTAGAGGACAACCACAACTAC CATCGCCCCATGATTCCCACCTTCTTGCCACTTTCTCGCAAGATTCCAAC ATTGTCCGGGTTCTAGATGTCCGGCAGCCTGGACAGGCTCTTCTTGAACT GAAGGGCCACGGCTCCTCCATCAACTGCGTTGAGTGGTCGCCCAACCGCC GCGGAGTCCTGGCTTCTGGTGCGGACGACTGCTTCGTACTTCTGTGGGAC CTCATCAACCAGCACAATGCGGCTCCTGTGCCTCCCATGCCTCCCGTCCC GCATAATGCGGGCACGCCCGCGACACCCAGTGAGCGAGGTCCAGCCGCCG TGTGGCTCTGCGACAACGAAGTGTCGAACATTAGCTGGTCGCCGCAGGGC GGTACCACGCCTGCCGGGCATCCGCGCGACTGGCTCGGGGTCTGCGGTGG ACGTGGACTATGGGGAGTGGCACTGTAGTCCCCACTCCGGGCAATGGCAG TCCTTCTGGGCAAGCCCAGCCCGTATGGCCCCCGCCTCTACTACGCATCG CTGATACAAATTATAGATACTCATTGGACACAACCAGACCCGGATACGCC GGACGCCGCTGCGGGGGAGATTAAACTCGACTATGTGAAGACCGCAGAGG CCACCCATTCGTATCCAGTAACACGGATCCTCTGGGAGCCGCCATCATCT CAGAAACAGTCTACCGATCTGTTGGCCACATCTGGTGATCATCTGCGATT ATGGTCTCTGCCAACGGCGCAACCCGTACCAAGTTCCAACTCCATTACGC GGTCGGCCAGCCAACACGCACCGACAGCGAAACTGTCGCCGCTGGCTTTG CTCTCAAATTCCAAGTCACCCGAGCATACCGCTCCAATCACCTCATTGGA CTGGAATACAATTTCCCCCAGTCTGATCATTACCTCCAGTATCGATACCA CCTGCACAATCTGGGATATTCCCACCCTTACCGCCAAGACACAGCTGATC GCACATGACAAAGAGGTATACGATGTTCGATTCTGTGCGAATAGCGTGGA CGTCTTTGTCAGCTGTGGTGCTGATGGTAGTGTGCGCATGTTCGATCTCC GCAGCCTAGAACATAGCACTATCATCTACGAGCCCACCGAGAAGCATGAG AAGGATGTCGAATCCTACGCAGCCTTTCGACTCTCGGCGGGCGACAAGCT ACGGTCGACCTGAGGAGCTCCATATTCCATCTGCGGGCCCCAATCTGCAG CGACAATCGATGTCTCACGAATACCCCGCTGGTCAAGACAACCCTGTCCC TTCTATCAACGTTCATTCATTGGGGTCACAACCGGGTCAGTATGGTGGTG GTGGAAGCAGCGGCGCGAGCGGAGTACTCCCGGGAGCGCTTCAGCCGGGC AACGTCAACCGTCCACCTGCAGTATCAGTCAACACTGCACCTTCGGCGCT ACCAACCCTACCAGAGCTGAATACCCCAATGCAGCCAACATCACAATCAG GACAACAGCCACCGTCTGCGCAACAACAGCAAACGCCCCAACAGCAGCAG CCGAATGCCCGCGCCAGTATGGTCAACTCTCATGGGCATTCTAGATCCAG CCCAGCAGGGTTTGAGCAGCCAAAATACAGACAGCCAGGCTCCTCTCCAG GCTCTGCATATCCTCCCCATACTCCCCAGGGTACAAAATACTCGCCGTTG GGTCTAGCCGACATCCGACCGACAGGAGACCTTCTGGGTGACCCAATCAC CAGCTCCGGAATGGCACCGTTCAACGGGGATAATCCGGTACCTACCAATA GCAACTACATTGCTCCTTGGCCCATATATTCTATGGATTGGTGTAAATGG CCTATTACGGGGAGCTCCAGCTCGTTCGGGGGCAAAATCGCCTTGGGAAG CTACCTAGAGGACAACCACAACTACCATCGCCCCATGATTCCCACCTTCT TGCCACTTTCTCGCAAGATTCCAACATTGTCCGGGTTCTAGATGTCCGGC AGCCTGGACAGGCTCTTCTTGAACTGAAGGGCCACGGCTCCTCCATCAAC TGCGTTGAGTGGTCGCCCAACCGCCGCGGAGTCCTGGCTTCTGGTGCGGA CGACTGCTTCGTACTTCTGTGGGACCTCATCAACCAGCACAATGCGGCTC CTGTGCCTCCCATGCCTCCCGTCCCGCATAATGCGGGCACGCCCGCGACA CCCAGTGAGCGAGGTCCAGCCGCCGTGTGGCTCTGCGACAACGAAGTGTC GAACATTAGCTGGTCGCCGCAGGGCGGTACCACGCCTGCCGGGCATCCGC GCGACTGGCTCGGGGTCTGCGGTGGACGTGGACTATGGGGAGTGGCACTG TAGTCCCCACTCCGGGCAATGGCAGTCCTTCTGGGCAAGCCCAGCCCGTA TGGCCCCCGCCTCTACTACGCATCGCTGATACAAATTATAGATACTCATT GGACACAACCAGACCCGGATACGCCGGACGCCGCTGCGGGGGAGATTAAA CTCGACTATGTGAAGACCGCAGAGGCCACCCATTCGTATCCAGTAACACG GATCCTCTGGGAGCCGCCATCATCTCAGAAACAGTCTACCGATCTGTTGG CCACATCTGGTGATCATCTGCGATTATGGTCTCTGCCAACGGCGCAACCC GTACCAAGTTCCAACTCCATTACGCGGTCGGCCAGCCAACACGCACCGAC AGCGAAACTGTCGCCGCTGGCTTTGCTCTCAAATTCCAAGTCACCCGAGC ATACCGCTCCAATCACCTCATTGGACTGGAATACAATTTCCCCCAGTCTG ATCATTACCTCCAGTATCGATACCACCTGCACAATCTGGGATATTCCCAC CCTTACCGCCAAGACACAGCTGATCGCACATGACAAAGAGGTATACGATG TTCGATTCTGTGCGAATAGCGTGGACGTCTTTGTCAGCTGTGGTGCTGAT GGTAGTGTGCGCATGTTCGATCTCCGCAGCCTAGAACATAGCACTATCAT CTACGAGCCCACCGAGAAGCATGAGAAGGATGTCGAATCCTACGCAGCCT TTCGACTCTCGGCGGGCGACAAGCTACGGTCGACCTGAGGAGCTCCATAT TCCATCTGCGGGCCCCAATCTGCAGCGACAATCGATGTCTCACGAATACC CCGCTGGTCAAGACAACCCTGTCCCTTCTATCAACGTTCATTCATTGGGG TCACAACCGGGTCAGTATGGTGGTGGTGGAAGCAGCGGCGCGAGCGGAGT ACTCCCGGGAGCGCTTCAGCCGGGCAACGTCAACCGTCCACCTGCAGTAT CAGTCAACACTGCACCTTCGGCGCTACCAACCCTACCAGAGCTGAATACC CCAATGCAGCCAACATCACAATCAGGACAACAGCCACCGTCTGCGCAACA ACAGCAAACGCCCCAACAGCAGCAGCCGAATGCCCGCGCCAGTATGGTCA ACTCTCATGGGCATTCTAGATCCAGCCCAGCAGGGTTTGAGCAGCCAAAA TACAGACAGCCAGGCTCCTCTCCAGGCTCTGCATATCCTCCCCATACTCC CCAGGGTACAAAATACTCGCCGTTGGGTCTAGCCGACATCCGACCGACAG GAGACCTTCTGGGTGACCCAATCACCAGCTCCGGAATGGCACCGTTCAAC GGGGATAATCCGGTACCTACCAATAGCAACTACATTGCTCCTTGGCCCAT ATATTCTATGGATTGGTGTAAATGGCCTATTACGGGGAGCTCCAGCTCGT TCGGGGGCAAAATCGCCTTGGGAAGCTACCTAGAGGACAACCACAACTAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008635-T1.utr3p1 | KJC3_008635-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008635-T1.utr5p1 | KJC3_008635-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | BUSCO:EOG09262J7K |
DBxref | InterPro:IPR036322 |
DBxref | InterPro:IPR017986 |
DBxref | InterPro:IPR019775 |
DBxref | InterPro:IPR015943 |
DBxref | InterPro:IPR001680 |
DBxref | PFAM:PF00400 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2568243..2571048 - |
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