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KJC3_008640-T1, KJC3_008640-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008640-T1
Unique NameKJC3_008640-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2584363..2587000+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008640-T1 ID=KJC3_008640-T1|Name=KJC3_008640-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2638bp|location=Sequence derived from alignment at ch6:2584363..2587000+ (Aspergillus niger KJC3)
CAATCAGAGCTTCACCCATCGCGATCCTGTTATGATTCTTGCCCAGTGCG
TGCCTAGAACCGCGTCTTGTCGTGTCTAATTGTTCCTTTCGACTGCCGGA
AGACACAGTTGGTCGTACCTTGGTTAGTTTCCGTTGCTAACCTTTGTGAA
CACACATTATTTCATCGGTTCCTTCATAAGCTTTCCTATACTGGATTGAC
TGACTGGCTGGCTTCCACACTTCTAGGCGCGCCTGGATCCTCGTGTCCCA
ACTCCCCCAGCGCCTCCCCGCTGGCAGGCTCCTGACTGGCTGATCCCTTT
GTTGTCTTCATCTACTCTTGTCCTTTCCTGACCCTCCATTCGATCTTTGT
TCCGTCTCCCTCTTCCGTCTCCCCAAAATCTCCCGTGGATCTTATCGCGC
AGATAAATATCCCCCCATCAACCTATCAACCAAACATGGCACCCCAAAGG
AAACGCAAGTCGGAGAGCGCGTCAATCGCCGAGGAAACCGAGTCACCTGC
TGCGAAGAGAGTGGTAAGCCTTTCCTATCTACAAATTCGCCAATACTACC
CGCGAGGTAGCGCCTATCAAACCAGTCGGCCCGTCCAATACGCGATCGCC
GCCCACTGGCTAATCACGGTGTCATTCACGTCTCTTCTCCAATGATAGGA
AGCATCGATGTTACATCCAATGCACGAACAAACGATTATGTTCTCCCAGT
TTTACGTTCAAGCAATACTAATCATTTCTTATTTACATAGGCCGCGCCCG
ACACACCGGCTACCGGAGAAAAGAGAAAGAGGGGTCGTCCCAGGAAATAT
CCTGAGGGTAGTACTCCCAAGCGCCCTGACGGCCCCAAAAGAGGCCGTGG
CCGTCCTCGTAAAGATCCGAATGCCCGTCAGTTCCCTCTTCGTCCCATAA
TTATCTCTGATGCTCTTACGGACAACGCCCACACGATTTCTTTTGTCATT
CCAGCCTCCTATCAACGATGTGTTCGGTATGATATTATCTACAGCATTTG
CTGACATACACCAGCTACTCCCGCAAAATCTACAACCCCCAAGCAGGGCA
AACGGGGCAGGCCAAGGAAGAACCCGATCGAGAATGGAACCGAACCTACC
TCATCAACAACGAAACCAGAGACGATCGATACCACATCCTTCGAAGGACG
CTCATACTGGTTGATGAAGGCTGAACCGGAATCGCGATTAGAGAAAGGTG
TTGATGTAAAATTCTCCGTTGATGACTTGGCTTCTCGCAAGGAGCCGGAG
CCATGGGACGGTACGTTTCCATAATAGGGCCTTGAATGATTGACATGTCT
GCTGATCACCCAGTAGGTGTGCGTAACCCTGTTGGTAAGTGAGACCATTG
GCGGTGGCAAGCTAGCCTTCTGGCTTACAAGCGACATAGCACAAAAACAT
ATCCGTGACATGAAGAAGGGTGATCTCGCCTTCTTCTACCACTCCAACTG
CAAAGTACCAGGCATTGCGGGTATCATGGAGATTGTCCAGGAGCATTCAC
CAGATGGTTAGTCCTAACACGAGCCCTTTCTGGAAAGGACAAGGTCAGCT
AATACGGCGAGCATATTTAGAGTCAGCCTTCGACCCCGCCCACCCATACT
ACGACGAAAAGTCGAACCGAGACGATCCCAAGTGGCAGGTTGTGCACGTA
GAGTTCCGGCGCAAGTTCAACAAAATGATTACGCTGAACGATCTCAAATC
ATATGCACAGTCCGAGCGGGCTCTTGAAAATATGCAGGTGCTGAAGCAGT
CCCGGCTGAGTGTGACGCCAGTAAGCGTCACAGAATGGGCGTTTATCATG
CGGGTAGCGGACGAAAACGAGGCCAAGGCAAATGCCGAAGCTTCCAAGGA
TGACAGTGCCGAGGGCGACGAGCCCGAATCAAGCGAGTAAAGGATAAAGC
GATTTCATTGTGTTGCAGGGCTTCTGGGATGATCAACTTACTCTTGTGGG
AATTCGACACGCGCATTTTACTCTGTCATGTACAATCAAGGGAGTTTCTT
TCGGTGCAGCTGATGGTGCGGTGGAGTCACGTAGCAGGCGGGTTACAACG
GCAGCTTGTTTGGATGACATGTCATGATTCTGACCGGGGATGCTTTTATA
TTGCCACTAGTTGACGCATTATAGGCCTTGTAAACTAGCAGATCCCCTGG
CGAGAACATACCATACCTTCTAGACTCGGCAAAGAACATCTGTGGCTGTA
GCGACGCTTTGTGTCTTGACGGTTATCTGTCGTGCAACAAGTCGGAAATC
CATCACTGCTGGCGGTAGAAGGATATTCAACTGCTTCTGAATATCCGCGA
CAACTGCAACCTATTATTGAGTAATCGGGGAAGCGAGGGGTTTATGGCGA
GGATTCGGGGAGGGGCGACAAGGCTGGAAGACCCGGAAGAACCATGATTG
GGGATGGAAGATGCAAGCTGCATGCACATGAGGAGGGGAGAGCAGGTGGT
CCCGCTAGATGAGGGAAAGAAGTGCGGAGGAGCTGCAGAATCAAGCTTAT
CAAGCTGAGGTGATTAGTTTACTTCGCCGGTGGAGTTGCTGACCCAGAGA
TTGGAGACGCCGGCGAAAGGATGGGATCCAGAAGAGTAAGTGTATGCGAA
GAGGGGCTGCCCGAGCACCGCCGCGTCTCCCATTCGCT
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Coding sequence (CDS) from alignment at ch6:2584363..2587000+

>KJC3_008640-T1 ID=KJC3_008640-T1|Name=KJC3_008640-T1|organism=Aspergillus niger KJC3|type=CDS|length=5490bp|location=Sequence derived from alignment at ch6:2584363..2587000+ (Aspergillus niger KJC3)
ATGGCACCCCAAAGGAAACGCAAGTCGGAGAGCGCGTCAATCGCCGAGGA
AACCGAGTCACCTGCTGCGAAGAGAGTGGCCGCGCCCGACACACCGGCTA
CCGGAGAAAAGAGAAAGAGGGGTCGTCCCAGGAAATATCCTGAGGGTAGT
ACTCCCAAGCGCCCTGACGGCCCCAAAAGAGGCCGTGGCCGTCCTCGTAA
AGATCCGAATGCCCCTACTCCCGCAAAATCTACAACCCCCAAGCAGGGCA
AACGGGGCAGGCCAAGGAAGAACCCGATCGAGAATGGAACCGAACCTACC
TCATCAACAACGAAACCAGAGACGATCGATACCACATCCTTCGAAGGACG
CTCATACTGGTTGATGAAGGCTGAACCGGAATCGCGATTAGAGAAAGGTG
TTGATGTAAAATTCTCCGTTGATGACTTGGCTTCTCGCAAGGAGCCGGAG
CCATGGGACGGTGTGCGTAACCCTGTTGCACAAAAACATATCCGTGACAT
GAAGAAGGGTGATCTCGCCTTCTTCTACCACTCCAACTGCAAAGTACCAG
GCATTGCGGGTATCATGGAGATTGTCCAGGAGCATTCACCAGATGAGTCA
GCCTTCGACCCCGCCCACCCATACTACGACGAAAAGTCGAACCGAGACGA
TCCCAAGTGGCAGGTTGTGCACGTAGAGTTCCGGCGCAAGTTCAACAAAA
TGATTACGCTGAACGATCTCAAATCATATGCACAGTCCGAGCGGGCTCTT
GAAAATATGCAGGTGCTGAAGCAGTCCCGGCTGAGTGTGACGCCAGTAAG
CGTCACAGAATGGGCGTTTATCATGCGGGTAGCGGACGAAAACGAGGCCA
AGGCAAATGCCGAAGCTTCCAAGGATGACAGTGCCGAGGGCGACGAGCCC
GAATCAAGCGAGTAAATGGCACCCCAAAGGAAACGCAAGTCGGAGAGCGC
GTCAATCGCCGAGGAAACCGAGTCACCTGCTGCGAAGAGAGTGGCCGCGC
CCGACACACCGGCTACCGGAGAAAAGAGAAAGAGGGGTCGTCCCAGGAAA
TATCCTGAGGGTAGTACTCCCAAGCGCCCTGACGGCCCCAAAAGAGGCCG
TGGCCGTCCTCGTAAAGATCCGAATGCCCCTACTCCCGCAAAATCTACAA
CCCCCAAGCAGGGCAAACGGGGCAGGCCAAGGAAGAACCCGATCGAGAAT
GGAACCGAACCTACCTCATCAACAACGAAACCAGAGACGATCGATACCAC
ATCCTTCGAAGGACGCTCATACTGGTTGATGAAGGCTGAACCGGAATCGC
GATTAGAGAAAGGTGTTGATGTAAAATTCTCCGTTGATGACTTGGCTTCT
CGCAAGGAGCCGGAGCCATGGGACGGTGTGCGTAACCCTGTTGCACAAAA
ACATATCCGTGACATGAAGAAGGGTGATCTCGCCTTCTTCTACCACTCCA
ACTGCAAAGTACCAGGCATTGCGGGTATCATGGAGATTGTCCAGGAGCAT
TCACCAGATGAGTCAGCCTTCGACCCCGCCCACCCATACTACGACGAAAA
GTCGAACCGAGACGATCCCAAGTGGCAGGTTGTGCACGTAGAGTTCCGGC
GCAAGTTCAACAAAATGATTACGCTGAACGATCTCAAATCATATGCACAG
TCCGAGCGGGCTCTTGAAAATATGCAGGTGCTGAAGCAGTCCCGGCTGAG
TGTGACGCCAGTAAGCGTCACAGAATGGGCGTTTATCATGCGGGTAGCGG
ACGAAAACGAGGCCAAGGCAAATGCCGAAGCTTCCAAGGATGACAGTGCC
GAGGGCGACGAGCCCGAATCAAGCGAGTAAATGGCACCCCAAAGGAAACG
CAAGTCGGAGAGCGCGTCAATCGCCGAGGAAACCGAGTCACCTGCTGCGA
AGAGAGTGGCCGCGCCCGACACACCGGCTACCGGAGAAAAGAGAAAGAGG
GGTCGTCCCAGGAAATATCCTGAGGGTAGTACTCCCAAGCGCCCTGACGG
CCCCAAAAGAGGCCGTGGCCGTCCTCGTAAAGATCCGAATGCCCCTACTC
CCGCAAAATCTACAACCCCCAAGCAGGGCAAACGGGGCAGGCCAAGGAAG
AACCCGATCGAGAATGGAACCGAACCTACCTCATCAACAACGAAACCAGA
GACGATCGATACCACATCCTTCGAAGGACGCTCATACTGGTTGATGAAGG
CTGAACCGGAATCGCGATTAGAGAAAGGTGTTGATGTAAAATTCTCCGTT
GATGACTTGGCTTCTCGCAAGGAGCCGGAGCCATGGGACGGTGTGCGTAA
CCCTGTTGCACAAAAACATATCCGTGACATGAAGAAGGGTGATCTCGCCT
TCTTCTACCACTCCAACTGCAAAGTACCAGGCATTGCGGGTATCATGGAG
ATTGTCCAGGAGCATTCACCAGATGAGTCAGCCTTCGACCCCGCCCACCC
ATACTACGACGAAAAGTCGAACCGAGACGATCCCAAGTGGCAGGTTGTGC
ACGTAGAGTTCCGGCGCAAGTTCAACAAAATGATTACGCTGAACGATCTC
AAATCATATGCACAGTCCGAGCGGGCTCTTGAAAATATGCAGGTGCTGAA
GCAGTCCCGGCTGAGTGTGACGCCAGTAAGCGTCACAGAATGGGCGTTTA
TCATGCGGGTAGCGGACGAAAACGAGGCCAAGGCAAATGCCGAAGCTTCC
AAGGATGACAGTGCCGAGGGCGACGAGCCCGAATCAAGCGAGTAAATGGC
ACCCCAAAGGAAACGCAAGTCGGAGAGCGCGTCAATCGCCGAGGAAACCG
AGTCACCTGCTGCGAAGAGAGTGGCCGCGCCCGACACACCGGCTACCGGA
GAAAAGAGAAAGAGGGGTCGTCCCAGGAAATATCCTGAGGGTAGTACTCC
CAAGCGCCCTGACGGCCCCAAAAGAGGCCGTGGCCGTCCTCGTAAAGATC
CGAATGCCCCTACTCCCGCAAAATCTACAACCCCCAAGCAGGGCAAACGG
GGCAGGCCAAGGAAGAACCCGATCGAGAATGGAACCGAACCTACCTCATC
AACAACGAAACCAGAGACGATCGATACCACATCCTTCGAAGGACGCTCAT
ACTGGTTGATGAAGGCTGAACCGGAATCGCGATTAGAGAAAGGTGTTGAT
GTAAAATTCTCCGTTGATGACTTGGCTTCTCGCAAGGAGCCGGAGCCATG
GGACGGTGTGCGTAACCCTGTTGCACAAAAACATATCCGTGACATGAAGA
AGGGTGATCTCGCCTTCTTCTACCACTCCAACTGCAAAGTACCAGGCATT
GCGGGTATCATGGAGATTGTCCAGGAGCATTCACCAGATGAGTCAGCCTT
CGACCCCGCCCACCCATACTACGACGAAAAGTCGAACCGAGACGATCCCA
AGTGGCAGGTTGTGCACGTAGAGTTCCGGCGCAAGTTCAACAAAATGATT
ACGCTGAACGATCTCAAATCATATGCACAGTCCGAGCGGGCTCTTGAAAA
TATGCAGGTGCTGAAGCAGTCCCGGCTGAGTGTGACGCCAGTAAGCGTCA
CAGAATGGGCGTTTATCATGCGGGTAGCGGACGAAAACGAGGCCAAGGCA
AATGCCGAAGCTTCCAAGGATGACAGTGCCGAGGGCGACGAGCCCGAATC
AAGCGAGTAAATGGCACCCCAAAGGAAACGCAAGTCGGAGAGCGCGTCAA
TCGCCGAGGAAACCGAGTCACCTGCTGCGAAGAGAGTGGCCGCGCCCGAC
ACACCGGCTACCGGAGAAAAGAGAAAGAGGGGTCGTCCCAGGAAATATCC
TGAGGGTAGTACTCCCAAGCGCCCTGACGGCCCCAAAAGAGGCCGTGGCC
GTCCTCGTAAAGATCCGAATGCCCCTACTCCCGCAAAATCTACAACCCCC
AAGCAGGGCAAACGGGGCAGGCCAAGGAAGAACCCGATCGAGAATGGAAC
CGAACCTACCTCATCAACAACGAAACCAGAGACGATCGATACCACATCCT
TCGAAGGACGCTCATACTGGTTGATGAAGGCTGAACCGGAATCGCGATTA
GAGAAAGGTGTTGATGTAAAATTCTCCGTTGATGACTTGGCTTCTCGCAA
GGAGCCGGAGCCATGGGACGGTGTGCGTAACCCTGTTGCACAAAAACATA
TCCGTGACATGAAGAAGGGTGATCTCGCCTTCTTCTACCACTCCAACTGC
AAAGTACCAGGCATTGCGGGTATCATGGAGATTGTCCAGGAGCATTCACC
AGATGAGTCAGCCTTCGACCCCGCCCACCCATACTACGACGAAAAGTCGA
ACCGAGACGATCCCAAGTGGCAGGTTGTGCACGTAGAGTTCCGGCGCAAG
TTCAACAAAATGATTACGCTGAACGATCTCAAATCATATGCACAGTCCGA
GCGGGCTCTTGAAAATATGCAGGTGCTGAAGCAGTCCCGGCTGAGTGTGA
CGCCAGTAAGCGTCACAGAATGGGCGTTTATCATGCGGGTAGCGGACGAA
AACGAGGCCAAGGCAAATGCCGAAGCTTCCAAGGATGACAGTGCCGAGGG
CGACGAGCCCGAATCAAGCGAGTAAATGGCACCCCAAAGGAAACGCAAGT
CGGAGAGCGCGTCAATCGCCGAGGAAACCGAGTCACCTGCTGCGAAGAGA
GTGGCCGCGCCCGACACACCGGCTACCGGAGAAAAGAGAAAGAGGGGTCG
TCCCAGGAAATATCCTGAGGGTAGTACTCCCAAGCGCCCTGACGGCCCCA
AAAGAGGCCGTGGCCGTCCTCGTAAAGATCCGAATGCCCCTACTCCCGCA
AAATCTACAACCCCCAAGCAGGGCAAACGGGGCAGGCCAAGGAAGAACCC
GATCGAGAATGGAACCGAACCTACCTCATCAACAACGAAACCAGAGACGA
TCGATACCACATCCTTCGAAGGACGCTCATACTGGTTGATGAAGGCTGAA
CCGGAATCGCGATTAGAGAAAGGTGTTGATGTAAAATTCTCCGTTGATGA
CTTGGCTTCTCGCAAGGAGCCGGAGCCATGGGACGGTGTGCGTAACCCTG
TTGCACAAAAACATATCCGTGACATGAAGAAGGGTGATCTCGCCTTCTTC
TACCACTCCAACTGCAAAGTACCAGGCATTGCGGGTATCATGGAGATTGT
CCAGGAGCATTCACCAGATGAGTCAGCCTTCGACCCCGCCCACCCATACT
ACGACGAAAAGTCGAACCGAGACGATCCCAAGTGGCAGGTTGTGCACGTA
GAGTTCCGGCGCAAGTTCAACAAAATGATTACGCTGAACGATCTCAAATC
ATATGCACAGTCCGAGCGGGCTCTTGAAAATATGCAGGTGCTGAAGCAGT
CCCGGCTGAGTGTGACGCCAGTAAGCGTCACAGAATGGGCGTTTATCATG
CGGGTAGCGGACGAAAACGAGGCCAAGGCAAATGCCGAAGCTTCCAAGGA
TGACAGTGCCGAGGGCGACGAGCCCGAATCAAGCGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000785chromatin
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008640KJC3_008640Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008640-T1KJC3_008640-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008640-T1.utr5p1KJC3_008640-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_008640-T1.utr5p2KJC3_008640-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008640-T1.exon1KJC3_008640-T1.exon1Aspergillus niger KJC3exon
KJC3_008640-T1.exon2KJC3_008640-T1.exon2Aspergillus niger KJC3exon
KJC3_008640-T1.exon3KJC3_008640-T1.exon3Aspergillus niger KJC3exon
KJC3_008640-T1.exon4KJC3_008640-T1.exon4Aspergillus niger KJC3exon
KJC3_008640-T1.exon5KJC3_008640-T1.exon5Aspergillus niger KJC3exon
KJC3_008640-T1.exon6KJC3_008640-T1.exon6Aspergillus niger KJC3exon
KJC3_008640-T1.exon7KJC3_008640-T1.exon7Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008640-T1.cdsKJC3_008640-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008640-T1.utr3p1KJC3_008640-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR015947
DBxrefInterPro:IPR002740
DBxrefInterPro:IPR017956
DBxrefInterPro:IPR000116
DBxrefPFAM:PF01878
DBxrefPFAM:PF02178
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2584363..2587000 +
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