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KJC3_008640-T2, KJC3_008640-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008640-T2
Unique NameKJC3_008640-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2584363..2587000+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008640-T2 ID=KJC3_008640-T2|Name=KJC3_008640-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2638bp|location=Sequence derived from alignment at ch6:2584363..2587000+ (Aspergillus niger KJC3)
CAATCAGAGCTTCACCCATCGCGATCCTGTTATGATTCTTGCCCAGTGCG
TGCCTAGAACCGCGTCTTGTCGTGTCTAATTGTTCCTTTCGACTGCCGGA
AGACACAGTTGGTCGTACCTTGGTTAGTTTCCGTTGCTAACCTTTGTGAA
CACACATTATTTCATCGGTTCCTTCATAAGCTTTCCTATACTGGATTGAC
TGACTGGCTGGCTTCCACACTTCTAGGCGCGCCTGGATCCTCGTGTCCCA
ACTCCCCCAGCGCCTCCCCGCTGGCAGGCTCCTGACTGGCTGATCCCTTT
GTTGTCTTCATCTACTCTTGTCCTTTCCTGACCCTCCATTCGATCTTTGT
TCCGTCTCCCTCTTCCGTCTCCCCAAAATCTCCCGTGGATCTTATCGCGC
AGATAAATATCCCCCCATCAACCTATCAACCAAACATGGCACCCCAAAGG
AAACGCAAGTCGGAGAGCGCGTCAATCGCCGAGGAAACCGAGTCACCTGC
TGCGAAGAGAGTGGTAAGCCTTTCCTATCTACAAATTCGCCAATACTACC
CGCGAGGTAGCGCCTATCAAACCAGTCGGCCCGTCCAATACGCGATCGCC
GCCCACTGGCTAATCACGGTGTCATTCACGTCTCTTCTCCAATGATAGGA
AGCATCGATGTTACATCCAATGCACGAACAAACGATTATGTTCTCCCAGT
TTTACGTTCAAGCAATACTAATCATTTCTTATTTACATAGGCCGCGCCCG
ACACACCGGCTACCGGAGAAAAGAGAAAGAGGGGTCGTCCCAGGAAATAT
CCTGAGGGTAGTACTCCCAAGCGCCCTGACGGCCCCAAAAGAGGCCGTGG
CCGTCCTCGTAAAGATCCGAATGCCCGTCAGTTCCCTCTTCGTCCCATAA
TTATCTCTGATGCTCTTACGGACAACGCCCACACGATTTCTTTTGTCATT
CCAGCCTCCTATCAACGATGTGTTCGGTATGATATTATCTACAGCATTTG
CTGACATACACCAGCTACTCCCGCAAAATCTACAACCCCCAAGCAGGGCA
AACGGGGCAGGCCAAGGAAGAACCCGATCGAGAATGGAACCGAACCTACC
TCATCAACAACGAAACCAGAGACGATCGATACCACATCCTTCGAAGGACG
CTCATACTGGTTGATGAAGGCTGAACCGGAATCGCGATTAGAGAAAGGTG
TTGATGTAAAATTCTCCGTTGATGACTTGGCTTCTCGCAAGGAGCCGGAG
CCATGGGACGGTACGTTTCCATAATAGGGCCTTGAATGATTGACATGTCT
GCTGATCACCCAGTAGGTGTGCGTAACCCTGTTGGTAAGTGAGACCATTG
GCGGTGGCAAGCTAGCCTTCTGGCTTACAAGCGACATAGCACAAAAACAT
ATCCGTGACATGAAGAAGGGTGATCTCGCCTTCTTCTACCACTCCAACTG
CAAAGTACCAGGCATTGCGGGTATCATGGAGATTGTCCAGGAGCATTCAC
CAGATGGTTAGTCCTAACACGAGCCCTTTCTGGAAAGGACAAGGTCAGCT
AATACGGCGAGCATATTTAGAGTCAGCCTTCGACCCCGCCCACCCATACT
ACGACGAAAAGTCGAACCGAGACGATCCCAAGTGGCAGGTTGTGCACGTA
GAGTTCCGGCGCAAGTTCAACAAAATGATTACGCTGAACGATCTCAAATC
ATATGCACAGTCCGAGCGGGCTCTTGAAAATATGCAGGTGCTGAAGCAGT
CCCGGCTGAGTGTGACGCCAGTAAGCGTCACAGAATGGGCGTTTATCATG
CGGGTAGCGGACGAAAACGAGGCCAAGGCAAATGCCGAAGCTTCCAAGGA
TGACAGTGCCGAGGGCGACGAGCCCGAATCAAGCGAGTAAAGGATAAAGC
GATTTCATTGTGTTGCAGGGCTTCTGGGATGATCAACTTACTCTTGTGGG
AATTCGACACGCGCATTTTACTCTGTCATGTACAATCAAGGGAGTTTCTT
TCGGTGCAGCTGATGGTGCGGTGGAGTCACGTAGCAGGCGGGTTACAACG
GCAGCTTGTTTGGATGACATGTCATGATTCTGACCGGGGATGCTTTTATA
TTGCCACTAGTTGACGCATTATAGGCCTTGTAAACTAGCAGATCCCCTGG
CGAGAACATACCATACCTTCTAGACTCGGCAAAGAACATCTGTGGCTGTA
GCGACGCTTTGTGTCTTGACGGTTATCTGTCGTGCAACAAGTCGGAAATC
CATCACTGCTGGCGGTAGAAGGATATTCAACTGCTTCTGAATATCCGCGA
CAACTGCAACCTATTATTGAGTAATCGGGGAAGCGAGGGGTTTATGGCGA
GGATTCGGGGAGGGGCGACAAGGCTGGAAGACCCGGAAGAACCATGATTG
GGGATGGAAGATGCAAGCTGCATGCACATGAGGAGGGGAGAGCAGGTGGT
CCCGCTAGATGAGGGAAAGAAGTGCGGAGGAGCTGCAGAATCAAGCTTAT
CAAGCTGAGGTGATTAGTTTACTTCGCCGGTGGAGTTGCTGACCCAGAGA
TTGGAGACGCCGGCGAAAGGATGGGATCCAGAAGAGTAAGTGTATGCGAA
GAGGGGCTGCCCGAGCACCGCCGCGTCTCCCATTCGCT
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Coding sequence (CDS) from alignment at ch6:2584363..2587000+

>KJC3_008640-T2 ID=KJC3_008640-T2|Name=KJC3_008640-T2|organism=Aspergillus niger KJC3|type=CDS|length=5202bp|location=Sequence derived from alignment at ch6:2584363..2587000+ (Aspergillus niger KJC3)
ATGATAGGAAGCATCGATGTTACATCCAATGCCGCGCCCGACACACCGGC
TACCGGAGAAAAGAGAAAGAGGGGTCGTCCCAGGAAATATCCTGAGGGTA
GTACTCCCAAGCGCCCTGACGGCCCCAAAAGAGGCCGTGGCCGTCCTCGT
AAAGATCCGAATGCCCCTACTCCCGCAAAATCTACAACCCCCAAGCAGGG
CAAACGGGGCAGGCCAAGGAAGAACCCGATCGAGAATGGAACCGAACCTA
CCTCATCAACAACGAAACCAGAGACGATCGATACCACATCCTTCGAAGGA
CGCTCATACTGGTTGATGAAGGCTGAACCGGAATCGCGATTAGAGAAAGG
TGTTGATGTAAAATTCTCCGTTGATGACTTGGCTTCTCGCAAGGAGCCGG
AGCCATGGGACGGTGTGCGTAACCCTGTTGCACAAAAACATATCCGTGAC
ATGAAGAAGGGTGATCTCGCCTTCTTCTACCACTCCAACTGCAAAGTACC
AGGCATTGCGGGTATCATGGAGATTGTCCAGGAGCATTCACCAGATGAGT
CAGCCTTCGACCCCGCCCACCCATACTACGACGAAAAGTCGAACCGAGAC
GATCCCAAGTGGCAGGTTGTGCACGTAGAGTTCCGGCGCAAGTTCAACAA
AATGATTACGCTGAACGATCTCAAATCATATGCACAGTCCGAGCGGGCTC
TTGAAAATATGCAGGTGCTGAAGCAGTCCCGGCTGAGTGTGACGCCAGTA
AGCGTCACAGAATGGGCGTTTATCATGCGGGTAGCGGACGAAAACGAGGC
CAAGGCAAATGCCGAAGCTTCCAAGGATGACAGTGCCGAGGGCGACGAGC
CCGAATCAAGCGAGTAAATGATAGGAAGCATCGATGTTACATCCAATGCC
GCGCCCGACACACCGGCTACCGGAGAAAAGAGAAAGAGGGGTCGTCCCAG
GAAATATCCTGAGGGTAGTACTCCCAAGCGCCCTGACGGCCCCAAAAGAG
GCCGTGGCCGTCCTCGTAAAGATCCGAATGCCCCTACTCCCGCAAAATCT
ACAACCCCCAAGCAGGGCAAACGGGGCAGGCCAAGGAAGAACCCGATCGA
GAATGGAACCGAACCTACCTCATCAACAACGAAACCAGAGACGATCGATA
CCACATCCTTCGAAGGACGCTCATACTGGTTGATGAAGGCTGAACCGGAA
TCGCGATTAGAGAAAGGTGTTGATGTAAAATTCTCCGTTGATGACTTGGC
TTCTCGCAAGGAGCCGGAGCCATGGGACGGTGTGCGTAACCCTGTTGCAC
AAAAACATATCCGTGACATGAAGAAGGGTGATCTCGCCTTCTTCTACCAC
TCCAACTGCAAAGTACCAGGCATTGCGGGTATCATGGAGATTGTCCAGGA
GCATTCACCAGATGAGTCAGCCTTCGACCCCGCCCACCCATACTACGACG
AAAAGTCGAACCGAGACGATCCCAAGTGGCAGGTTGTGCACGTAGAGTTC
CGGCGCAAGTTCAACAAAATGATTACGCTGAACGATCTCAAATCATATGC
ACAGTCCGAGCGGGCTCTTGAAAATATGCAGGTGCTGAAGCAGTCCCGGC
TGAGTGTGACGCCAGTAAGCGTCACAGAATGGGCGTTTATCATGCGGGTA
GCGGACGAAAACGAGGCCAAGGCAAATGCCGAAGCTTCCAAGGATGACAG
TGCCGAGGGCGACGAGCCCGAATCAAGCGAGTAAATGATAGGAAGCATCG
ATGTTACATCCAATGCCGCGCCCGACACACCGGCTACCGGAGAAAAGAGA
AAGAGGGGTCGTCCCAGGAAATATCCTGAGGGTAGTACTCCCAAGCGCCC
TGACGGCCCCAAAAGAGGCCGTGGCCGTCCTCGTAAAGATCCGAATGCCC
CTACTCCCGCAAAATCTACAACCCCCAAGCAGGGCAAACGGGGCAGGCCA
AGGAAGAACCCGATCGAGAATGGAACCGAACCTACCTCATCAACAACGAA
ACCAGAGACGATCGATACCACATCCTTCGAAGGACGCTCATACTGGTTGA
TGAAGGCTGAACCGGAATCGCGATTAGAGAAAGGTGTTGATGTAAAATTC
TCCGTTGATGACTTGGCTTCTCGCAAGGAGCCGGAGCCATGGGACGGTGT
GCGTAACCCTGTTGCACAAAAACATATCCGTGACATGAAGAAGGGTGATC
TCGCCTTCTTCTACCACTCCAACTGCAAAGTACCAGGCATTGCGGGTATC
ATGGAGATTGTCCAGGAGCATTCACCAGATGAGTCAGCCTTCGACCCCGC
CCACCCATACTACGACGAAAAGTCGAACCGAGACGATCCCAAGTGGCAGG
TTGTGCACGTAGAGTTCCGGCGCAAGTTCAACAAAATGATTACGCTGAAC
GATCTCAAATCATATGCACAGTCCGAGCGGGCTCTTGAAAATATGCAGGT
GCTGAAGCAGTCCCGGCTGAGTGTGACGCCAGTAAGCGTCACAGAATGGG
CGTTTATCATGCGGGTAGCGGACGAAAACGAGGCCAAGGCAAATGCCGAA
GCTTCCAAGGATGACAGTGCCGAGGGCGACGAGCCCGAATCAAGCGAGTA
AATGATAGGAAGCATCGATGTTACATCCAATGCCGCGCCCGACACACCGG
CTACCGGAGAAAAGAGAAAGAGGGGTCGTCCCAGGAAATATCCTGAGGGT
AGTACTCCCAAGCGCCCTGACGGCCCCAAAAGAGGCCGTGGCCGTCCTCG
TAAAGATCCGAATGCCCCTACTCCCGCAAAATCTACAACCCCCAAGCAGG
GCAAACGGGGCAGGCCAAGGAAGAACCCGATCGAGAATGGAACCGAACCT
ACCTCATCAACAACGAAACCAGAGACGATCGATACCACATCCTTCGAAGG
ACGCTCATACTGGTTGATGAAGGCTGAACCGGAATCGCGATTAGAGAAAG
GTGTTGATGTAAAATTCTCCGTTGATGACTTGGCTTCTCGCAAGGAGCCG
GAGCCATGGGACGGTGTGCGTAACCCTGTTGCACAAAAACATATCCGTGA
CATGAAGAAGGGTGATCTCGCCTTCTTCTACCACTCCAACTGCAAAGTAC
CAGGCATTGCGGGTATCATGGAGATTGTCCAGGAGCATTCACCAGATGAG
TCAGCCTTCGACCCCGCCCACCCATACTACGACGAAAAGTCGAACCGAGA
CGATCCCAAGTGGCAGGTTGTGCACGTAGAGTTCCGGCGCAAGTTCAACA
AAATGATTACGCTGAACGATCTCAAATCATATGCACAGTCCGAGCGGGCT
CTTGAAAATATGCAGGTGCTGAAGCAGTCCCGGCTGAGTGTGACGCCAGT
AAGCGTCACAGAATGGGCGTTTATCATGCGGGTAGCGGACGAAAACGAGG
CCAAGGCAAATGCCGAAGCTTCCAAGGATGACAGTGCCGAGGGCGACGAG
CCCGAATCAAGCGAGTAAATGATAGGAAGCATCGATGTTACATCCAATGC
CGCGCCCGACACACCGGCTACCGGAGAAAAGAGAAAGAGGGGTCGTCCCA
GGAAATATCCTGAGGGTAGTACTCCCAAGCGCCCTGACGGCCCCAAAAGA
GGCCGTGGCCGTCCTCGTAAAGATCCGAATGCCCCTACTCCCGCAAAATC
TACAACCCCCAAGCAGGGCAAACGGGGCAGGCCAAGGAAGAACCCGATCG
AGAATGGAACCGAACCTACCTCATCAACAACGAAACCAGAGACGATCGAT
ACCACATCCTTCGAAGGACGCTCATACTGGTTGATGAAGGCTGAACCGGA
ATCGCGATTAGAGAAAGGTGTTGATGTAAAATTCTCCGTTGATGACTTGG
CTTCTCGCAAGGAGCCGGAGCCATGGGACGGTGTGCGTAACCCTGTTGCA
CAAAAACATATCCGTGACATGAAGAAGGGTGATCTCGCCTTCTTCTACCA
CTCCAACTGCAAAGTACCAGGCATTGCGGGTATCATGGAGATTGTCCAGG
AGCATTCACCAGATGAGTCAGCCTTCGACCCCGCCCACCCATACTACGAC
GAAAAGTCGAACCGAGACGATCCCAAGTGGCAGGTTGTGCACGTAGAGTT
CCGGCGCAAGTTCAACAAAATGATTACGCTGAACGATCTCAAATCATATG
CACAGTCCGAGCGGGCTCTTGAAAATATGCAGGTGCTGAAGCAGTCCCGG
CTGAGTGTGACGCCAGTAAGCGTCACAGAATGGGCGTTTATCATGCGGGT
AGCGGACGAAAACGAGGCCAAGGCAAATGCCGAAGCTTCCAAGGATGACA
GTGCCGAGGGCGACGAGCCCGAATCAAGCGAGTAAATGATAGGAAGCATC
GATGTTACATCCAATGCCGCGCCCGACACACCGGCTACCGGAGAAAAGAG
AAAGAGGGGTCGTCCCAGGAAATATCCTGAGGGTAGTACTCCCAAGCGCC
CTGACGGCCCCAAAAGAGGCCGTGGCCGTCCTCGTAAAGATCCGAATGCC
CCTACTCCCGCAAAATCTACAACCCCCAAGCAGGGCAAACGGGGCAGGCC
AAGGAAGAACCCGATCGAGAATGGAACCGAACCTACCTCATCAACAACGA
AACCAGAGACGATCGATACCACATCCTTCGAAGGACGCTCATACTGGTTG
ATGAAGGCTGAACCGGAATCGCGATTAGAGAAAGGTGTTGATGTAAAATT
CTCCGTTGATGACTTGGCTTCTCGCAAGGAGCCGGAGCCATGGGACGGTG
TGCGTAACCCTGTTGCACAAAAACATATCCGTGACATGAAGAAGGGTGAT
CTCGCCTTCTTCTACCACTCCAACTGCAAAGTACCAGGCATTGCGGGTAT
CATGGAGATTGTCCAGGAGCATTCACCAGATGAGTCAGCCTTCGACCCCG
CCCACCCATACTACGACGAAAAGTCGAACCGAGACGATCCCAAGTGGCAG
GTTGTGCACGTAGAGTTCCGGCGCAAGTTCAACAAAATGATTACGCTGAA
CGATCTCAAATCATATGCACAGTCCGAGCGGGCTCTTGAAAATATGCAGG
TGCTGAAGCAGTCCCGGCTGAGTGTGACGCCAGTAAGCGTCACAGAATGG
GCGTTTATCATGCGGGTAGCGGACGAAAACGAGGCCAAGGCAAATGCCGA
AGCTTCCAAGGATGACAGTGCCGAGGGCGACGAGCCCGAATCAAGCGAGT
AA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000785chromatin
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008640KJC3_008640Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008640-T2KJC3_008640-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008640-T2.utr5p1KJC3_008640-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_008640-T2.utr5p2KJC3_008640-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008640-T2.exon1KJC3_008640-T2.exon1Aspergillus niger KJC3exon
KJC3_008640-T2.exon2KJC3_008640-T2.exon2Aspergillus niger KJC3exon
KJC3_008640-T2.exon3KJC3_008640-T2.exon3Aspergillus niger KJC3exon
KJC3_008640-T2.exon4KJC3_008640-T2.exon4Aspergillus niger KJC3exon
KJC3_008640-T2.exon5KJC3_008640-T2.exon5Aspergillus niger KJC3exon
KJC3_008640-T2.exon6KJC3_008640-T2.exon6Aspergillus niger KJC3exon
KJC3_008640-T2.exon7KJC3_008640-T2.exon7Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008640-T2.cdsKJC3_008640-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008640-T2.utr3p1KJC3_008640-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR015947
DBxrefInterPro:IPR002740
DBxrefInterPro:IPR017956
DBxrefInterPro:IPR000116
DBxrefPFAM:PF01878
DBxrefPFAM:PF02178
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2584363..2587000 +
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