|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2629439..2631551+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008655-T1 ID=KJC3_008655-T1|Name=KJC3_008655-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2113bp|location=Sequence derived from alignment at ch6:2629439..2631551+ (Aspergillus niger KJC3)
AGAAAACAGTAGCCGTATATTACTTGCTAGCATGCAGTGCATAGCAGCTT
TACTTGCCTTTGCAAGCATATTGTCAGGTTTGTCATTGTCATTTCCAGTT
TCAATTTCACCATTGCACCCTTCCGCAGCTTCCGGAGCTGGTCTAACCGC
AGAGTTCCATAGGCGTAAGTGCTAGCTTCAACAATGAGTACGGCAGACAC
TTGATGCAGCAGCGCGCGCTACCAAATGCGCCTGATGGATATACACCAAC
TACGGTCGGGTGCTCTGCGAGTCGTCCCACTGTGCGCAGTGCGACAGCAC
TCTCGTCGAACGAATCGTCATGGCTAAGGACTCGGAGGAACAATACACTG
TCGGCCATGAGAGAATTCTTCGGTCGCGTCAACATTACAGACTTTGACGC
TGTGGGGTATATCAATCGCATCTCTAGCAACACCTCCGATTTGCCGAATA
TTGGCATTGCTGTCTCTGGTGGAGGGTACCGGGCTCTGATGAACGGTGCT
GGGGCAATCAAGGCTTTTGATAATCGTACAGTCAATTCTACAAGCAATGG
TCAGCTGGGTGGACTGCTGCAATCAGCAACATATCTGGCCGGCCTCAGTG
GTGGGGCATGGTTGGTGGGATCTATCTACTTGAATAATTTCTCCACCATC
TCGTCGCTTCAGACCTACGATCCTGGTGATGTCTGGCAGTTCCAGAACTC
GATCTTTGAAGGCCCCGACGGGGATAGTATCCAAATTATAGATTCTGCAA
CCTACTACAGAGATATTTATGACGCAGTGTCTGGAAAGGATGATGCAGGT
TGGCAGACATCCATCACTGATTACTGGTATGAGTCCTAGCCCAATTCTCG
CCCAGCAGCGATACTGATGCCCACCAGGGGCCGCGCGCTCTCATACCAGC
TCGTCAACGCCACCGCCGGAGGAATCAACTACACCTGGTCATCCATAGCT
CTGACCGACTCCTTCAGGAGGGCAGAAATGCCAATGCCCGTGCTAGTCGC
AGACGGCCGATACCCAGACGAGCTCCTAGTCAGCAGCAATGCCACAGTCT
ACGAATTCAACCCCTGGGAATTCGGCACCTTTGACCCAACGGTACACGGC
TTCGTGCCCGTTCAGTATCTGGGCTCACGCTTCGTAGCCGGATCCCTTCC
CAGCAACGAAAGCTGCGTCCGCGGGTTTGACAATGGCGGCTTTATTATGG
GAACCTCATCCACCTTATTCAACCAATTCCTTCTTCAAATCAACACAACT
AGCCTCCCCAGCTTCCTGAAAGACGCATTTACAAGCATCCTAGAAGATCT
CGGCGAAAACAGCCAAGACATAGCAGTTTACACCCCCAACCCGTTCTATC
TCTGGGCCAATTCCACCTCCCCATCCGCAAGCCAAACAGTCCTCGACCTC
GTGGATGGCGGCGAAGACCTCCAAAACATCCCCTTACATCCACTCATCCA
GCCAGAGCGCCATGTGGACGTCATCTTTGCCGTGGACTCCTCCGCAGACA
CGCAGTATAACTGGCCCAACGGCACCGCATTAGTCGCCACCTACGAGCGC
AGCCTAAACTCTACGGGCATCGGCAATGGGACAGCTTTCCCTGCTATCCC
CGACCAAAATACTTTTGTCAATGAGGGTCTCAATACGCGACCAACGTTCT
TCGGGTGCAACTCATCGAATACCACTGGGCCAGCACCGTTAGTTGTTTAC
CTTCCTAACTTTCCGTATGTGACTTTTTCGAACGTGTCGACGTTTGATCC
GAGTTACTCGGAGTCGCAGAGGGATAGTATTATCCTTAATGGGTATGATG
TGGCCACGATGGGGAATAATAGTCGCGATGGGGAATGGTCTTCTTGTGTT
GCGTGTGCTGTTTTGAGTCGGTCTTTTGAACGGACTAACACTACGGTGCC
GGATCAGTGTAGCCGGTGCTTTGAGAGGTACTGCTGGGATGGTACTACGA
ATAGTTCGACTCCGGGTACTTATGAGCCCAGTACGGTATTTGATAATGCT
GGGTATGCTGTAATGCCTGCTGTTTTCGCGACTACGATGGCTGCTGCGAC
TGTTTCGGCGTTTATGTAGGACATTTTCCGCTGTTCAGGGTGTATGTATA
GTGAGATTGATAG back to topCoding sequence (CDS) from alignment at ch6:2629439..2631551+ >KJC3_008655-T1 ID=KJC3_008655-T1|Name=KJC3_008655-T1|organism=Aspergillus niger KJC3|type=CDS|length=5706bp|location=Sequence derived from alignment at ch6:2629439..2631551+ (Aspergillus niger KJC3)
ATGCAGTGCATAGCAGCTTTACTTGCCTTTGCAAGCATATTGTCAGGCGT
AAGTGCTAGCTTCAACAATGAGTACGGCAGACACTTGATGCAGCAGCGCG
CGCTACCAAATGCGCCTGATGGATATACACCAACTACGGTCGGGTGCTCT
GCGAGTCGTCCCACTGTGCGCAGTGCGACAGCACTCTCGTCGAACGAATC
GTCATGGCTAAGGACTCGGAGGAACAATACACTGTCGGCCATGAGAGAAT
TCTTCGGTCGCGTCAACATTACAGACTTTGACGCTGTGGGGTATATCAAT
CGCATCTCTAGCAACACCTCCGATTTGCCGAATATTGGCATTGCTGTCTC
TGGTGGAGGGTACCGGGCTCTGATGAACGGTGCTGGGGCAATCAAGGCTT
TTGATAATCGTACAGTCAATTCTACAAGCAATGGTCAGCTGGGTGGACTG
CTGCAATCAGCAACATATCTGGCCGGCCTCAGTGGTGGGGCATGGTTGGT
GGGATCTATCTACTTGAATAATTTCTCCACCATCTCGTCGCTTCAGACCT
ACGATCCTGGTGATGTCTGGCAGTTCCAGAACTCGATCTTTGAAGGCCCC
GACGGGGATAGTATCCAAATTATAGATTCTGCAACCTACTACAGAGATAT
TTATGACGCAGTGTCTGGAAAGGATGATGCAGGTTGGCAGACATCCATCA
CTGATTACTGGGGCCGCGCGCTCTCATACCAGCTCGTCAACGCCACCGCC
GGAGGAATCAACTACACCTGGTCATCCATAGCTCTGACCGACTCCTTCAG
GAGGGCAGAAATGCCAATGCCCGTGCTAGTCGCAGACGGCCGATACCCAG
ACGAGCTCCTAGTCAGCAGCAATGCCACAGTCTACGAATTCAACCCCTGG
GAATTCGGCACCTTTGACCCAACGGTACACGGCTTCGTGCCCGTTCAGTA
TCTGGGCTCACGCTTCGTAGCCGGATCCCTTCCCAGCAACGAAAGCTGCG
TCCGCGGGTTTGACAATGGCGGCTTTATTATGGGAACCTCATCCACCTTA
TTCAACCAATTCCTTCTTCAAATCAACACAACTAGCCTCCCCAGCTTCCT
GAAAGACGCATTTACAAGCATCCTAGAAGATCTCGGCGAAAACAGCCAAG
ACATAGCAGTTTACACCCCCAACCCGTTCTATCTCTGGGCCAATTCCACC
TCCCCATCCGCAAGCCAAACAGTCCTCGACCTCGTGGATGGCGGCGAAGA
CCTCCAAAACATCCCCTTACATCCACTCATCCAGCCAGAGCGCCATGTGG
ACGTCATCTTTGCCGTGGACTCCTCCGCAGACACGCAGTATAACTGGCCC
AACGGCACCGCATTAGTCGCCACCTACGAGCGCAGCCTAAACTCTACGGG
CATCGGCAATGGGACAGCTTTCCCTGCTATCCCCGACCAAAATACTTTTG
TCAATGAGGGTCTCAATACGCGACCAACGTTCTTCGGGTGCAACTCATCG
AATACCACTGGGCCAGCACCGTTAGTTGTTTACCTTCCTAACTTTCCGTA
TGTGACTTTTTCGAACGTGTCGACGTTTGATCCGAGTTACTCGGAGTCGC
AGAGGGATAGTATTATCCTTAATGGGTATGATGTGGCCACGATGGGGAAT
AATAGTCGCGATGGGGAATGGTCTTCTTGTGTTGCGTGTGCTGTTTTGAG
TCGGTCTTTTGAACGGACTAACACTACGGTGCCGGATCAGTGTAGCCGGT
GCTTTGAGAGGTACTGCTGGGATGGTACTACGAATAGTTCGACTCCGGGT
ACTTATGAGCCCAGTACGGTATTTGATAATGCTGGGTATGCTGTAATGCC
TGCTGTTTTCGCGACTACGATGGCTGCTGCGACTGTTTCGGCGTTTATGT
AGATGCAGTGCATAGCAGCTTTACTTGCCTTTGCAAGCATATTGTCAGGC
GTAAGTGCTAGCTTCAACAATGAGTACGGCAGACACTTGATGCAGCAGCG
CGCGCTACCAAATGCGCCTGATGGATATACACCAACTACGGTCGGGTGCT
CTGCGAGTCGTCCCACTGTGCGCAGTGCGACAGCACTCTCGTCGAACGAA
TCGTCATGGCTAAGGACTCGGAGGAACAATACACTGTCGGCCATGAGAGA
ATTCTTCGGTCGCGTCAACATTACAGACTTTGACGCTGTGGGGTATATCA
ATCGCATCTCTAGCAACACCTCCGATTTGCCGAATATTGGCATTGCTGTC
TCTGGTGGAGGGTACCGGGCTCTGATGAACGGTGCTGGGGCAATCAAGGC
TTTTGATAATCGTACAGTCAATTCTACAAGCAATGGTCAGCTGGGTGGAC
TGCTGCAATCAGCAACATATCTGGCCGGCCTCAGTGGTGGGGCATGGTTG
GTGGGATCTATCTACTTGAATAATTTCTCCACCATCTCGTCGCTTCAGAC
CTACGATCCTGGTGATGTCTGGCAGTTCCAGAACTCGATCTTTGAAGGCC
CCGACGGGGATAGTATCCAAATTATAGATTCTGCAACCTACTACAGAGAT
ATTTATGACGCAGTGTCTGGAAAGGATGATGCAGGTTGGCAGACATCCAT
CACTGATTACTGGGGCCGCGCGCTCTCATACCAGCTCGTCAACGCCACCG
CCGGAGGAATCAACTACACCTGGTCATCCATAGCTCTGACCGACTCCTTC
AGGAGGGCAGAAATGCCAATGCCCGTGCTAGTCGCAGACGGCCGATACCC
AGACGAGCTCCTAGTCAGCAGCAATGCCACAGTCTACGAATTCAACCCCT
GGGAATTCGGCACCTTTGACCCAACGGTACACGGCTTCGTGCCCGTTCAG
TATCTGGGCTCACGCTTCGTAGCCGGATCCCTTCCCAGCAACGAAAGCTG
CGTCCGCGGGTTTGACAATGGCGGCTTTATTATGGGAACCTCATCCACCT
TATTCAACCAATTCCTTCTTCAAATCAACACAACTAGCCTCCCCAGCTTC
CTGAAAGACGCATTTACAAGCATCCTAGAAGATCTCGGCGAAAACAGCCA
AGACATAGCAGTTTACACCCCCAACCCGTTCTATCTCTGGGCCAATTCCA
CCTCCCCATCCGCAAGCCAAACAGTCCTCGACCTCGTGGATGGCGGCGAA
GACCTCCAAAACATCCCCTTACATCCACTCATCCAGCCAGAGCGCCATGT
GGACGTCATCTTTGCCGTGGACTCCTCCGCAGACACGCAGTATAACTGGC
CCAACGGCACCGCATTAGTCGCCACCTACGAGCGCAGCCTAAACTCTACG
GGCATCGGCAATGGGACAGCTTTCCCTGCTATCCCCGACCAAAATACTTT
TGTCAATGAGGGTCTCAATACGCGACCAACGTTCTTCGGGTGCAACTCAT
CGAATACCACTGGGCCAGCACCGTTAGTTGTTTACCTTCCTAACTTTCCG
TATGTGACTTTTTCGAACGTGTCGACGTTTGATCCGAGTTACTCGGAGTC
GCAGAGGGATAGTATTATCCTTAATGGGTATGATGTGGCCACGATGGGGA
ATAATAGTCGCGATGGGGAATGGTCTTCTTGTGTTGCGTGTGCTGTTTTG
AGTCGGTCTTTTGAACGGACTAACACTACGGTGCCGGATCAGTGTAGCCG
GTGCTTTGAGAGGTACTGCTGGGATGGTACTACGAATAGTTCGACTCCGG
GTACTTATGAGCCCAGTACGGTATTTGATAATGCTGGGTATGCTGTAATG
CCTGCTGTTTTCGCGACTACGATGGCTGCTGCGACTGTTTCGGCGTTTAT
GTAGATGCAGTGCATAGCAGCTTTACTTGCCTTTGCAAGCATATTGTCAG
GCGTAAGTGCTAGCTTCAACAATGAGTACGGCAGACACTTGATGCAGCAG
CGCGCGCTACCAAATGCGCCTGATGGATATACACCAACTACGGTCGGGTG
CTCTGCGAGTCGTCCCACTGTGCGCAGTGCGACAGCACTCTCGTCGAACG
AATCGTCATGGCTAAGGACTCGGAGGAACAATACACTGTCGGCCATGAGA
GAATTCTTCGGTCGCGTCAACATTACAGACTTTGACGCTGTGGGGTATAT
CAATCGCATCTCTAGCAACACCTCCGATTTGCCGAATATTGGCATTGCTG
TCTCTGGTGGAGGGTACCGGGCTCTGATGAACGGTGCTGGGGCAATCAAG
GCTTTTGATAATCGTACAGTCAATTCTACAAGCAATGGTCAGCTGGGTGG
ACTGCTGCAATCAGCAACATATCTGGCCGGCCTCAGTGGTGGGGCATGGT
TGGTGGGATCTATCTACTTGAATAATTTCTCCACCATCTCGTCGCTTCAG
ACCTACGATCCTGGTGATGTCTGGCAGTTCCAGAACTCGATCTTTGAAGG
CCCCGACGGGGATAGTATCCAAATTATAGATTCTGCAACCTACTACAGAG
ATATTTATGACGCAGTGTCTGGAAAGGATGATGCAGGTTGGCAGACATCC
ATCACTGATTACTGGGGCCGCGCGCTCTCATACCAGCTCGTCAACGCCAC
CGCCGGAGGAATCAACTACACCTGGTCATCCATAGCTCTGACCGACTCCT
TCAGGAGGGCAGAAATGCCAATGCCCGTGCTAGTCGCAGACGGCCGATAC
CCAGACGAGCTCCTAGTCAGCAGCAATGCCACAGTCTACGAATTCAACCC
CTGGGAATTCGGCACCTTTGACCCAACGGTACACGGCTTCGTGCCCGTTC
AGTATCTGGGCTCACGCTTCGTAGCCGGATCCCTTCCCAGCAACGAAAGC
TGCGTCCGCGGGTTTGACAATGGCGGCTTTATTATGGGAACCTCATCCAC
CTTATTCAACCAATTCCTTCTTCAAATCAACACAACTAGCCTCCCCAGCT
TCCTGAAAGACGCATTTACAAGCATCCTAGAAGATCTCGGCGAAAACAGC
CAAGACATAGCAGTTTACACCCCCAACCCGTTCTATCTCTGGGCCAATTC
CACCTCCCCATCCGCAAGCCAAACAGTCCTCGACCTCGTGGATGGCGGCG
AAGACCTCCAAAACATCCCCTTACATCCACTCATCCAGCCAGAGCGCCAT
GTGGACGTCATCTTTGCCGTGGACTCCTCCGCAGACACGCAGTATAACTG
GCCCAACGGCACCGCATTAGTCGCCACCTACGAGCGCAGCCTAAACTCTA
CGGGCATCGGCAATGGGACAGCTTTCCCTGCTATCCCCGACCAAAATACT
TTTGTCAATGAGGGTCTCAATACGCGACCAACGTTCTTCGGGTGCAACTC
ATCGAATACCACTGGGCCAGCACCGTTAGTTGTTTACCTTCCTAACTTTC
CGTATGTGACTTTTTCGAACGTGTCGACGTTTGATCCGAGTTACTCGGAG
TCGCAGAGGGATAGTATTATCCTTAATGGGTATGATGTGGCCACGATGGG
GAATAATAGTCGCGATGGGGAATGGTCTTCTTGTGTTGCGTGTGCTGTTT
TGAGTCGGTCTTTTGAACGGACTAACACTACGGTGCCGGATCAGTGTAGC
CGGTGCTTTGAGAGGTACTGCTGGGATGGTACTACGAATAGTTCGACTCC
GGGTACTTATGAGCCCAGTACGGTATTTGATAATGCTGGGTATGCTGTAA
TGCCTGCTGTTTTCGCGACTACGATGGCTGCTGCGACTGTTTCGGCGTTT
ATGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009395 | phospholipid catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004620 | phospholipase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008655-T1.utr5p1 | KJC3_008655-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008655-T1.utr3p1 | KJC3_008655-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR016035 |
| DBxref | InterPro:IPR002642 |
| DBxref | PFAM:PF01735 |
| Product | Lysophospholipase 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2629439..2631551 + |
|
