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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2677909..2680569- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008672-T1 ID=KJC3_008672-T1|Name=KJC3_008672-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2661bp|location=Sequence derived from alignment at ch6:2677909..2680569- (Aspergillus niger KJC3)
CTCCGCCATTTCTTTTTTTGACACTTTATCTTTGATATATTTCCATATTT
TTCTTCTTCGAGGTGCCTTGAGCGCTTACTTGCACAATGGGTACCTTCAA
GAAGGAAGCCTCTCGTAAAGAGCGGCAGGGGAAGACTGGAGATGGCATGG
GGAACGTCCGGGTAAAGGGTGAAAACTTTTACAGGTTAGTACACCCGTTG
CGACAGATGGTCCTGGATATGTGTGCTGACTTGTTCAAGAGATGCGAAGA
AGTTGAGGACCTTGAATATGCTCAAGGATGGTAAACCCCAACGTAACGCT
GAAGGAAAGATCACCAAGGCTGCTTCGTACCAGTCTCGAGACGCCCCCGT
CGCTAGGATTGAACCCAACCGTAAATGGTTTGGAAACACCAGAGTGATCT
CGCAAGAGGCTCTGTCCTCTTTCCGTGAGGCGGTCGCTGAGCGTGCTTCT
GATCCGTATTCAGTCTTGCTCAAGACCAACAAACTTCCCATGAGCCTGAT
CAGAGATGACAAGGGTGTAAATGGATTGAAGCAGCACCAGGCCAAGATGG
CCATCGAGACGAATCCCTTCAGTGACACCTTCGGGCCCAAGGCTCAGAGG
AAACGTGTCAAGTTGGGTGTTTCGTCGCTTGCGGATCTGGCTGGCGAGTC
CGCCAAGATGCACGACGCCTATGTTGAGAAGTCGGACCATGCTACTCATG
AAGATGGTACTATGGTGGTGAACGGTGATGACGTCGCAGTAGAGGAGGAC
TCTAGTGTCGCGCCCATCGCAAAGGAGGCTGTCTTCCTTAAGGGACAGAG
TAAGCGTATTTGGAACGAACTTTACAAGGTCATTGATTCCTCCGATGTTG
TCATCCATCTCCTTGATGCTCGTGATCCGGAAGGTACACGGTGCAGGAGT
ATCGAAAAATACATCCGGGAGGAGGCTCCTCACAAGCACTTGATTTTCGT
CTTGAACAAGTGTGATCTTGTGCCTACAGGCGTGGCGGTAAGTCTCTATT
CGCTTTCTTTTCTCCTTGCAACCACCCCCTATTCCTTTGATATACAACAC
GGCTTTTCGCCGATGCCATCGCTAAGTCAAGGCTACTCCTGCGACTTCAT
GTCGTGTTATTCACTATGGGAGACTGTCTGTTACAGCTTTGGCAGATTGA
CGCTGGTCCGCGCCGACCTTCTTTCTGAAGCTAGGCTGATTGGTTTTCGT
TTTGAAAGCCAATCGTTAAGGACCGAGCTGTGTTCTGTTTTTGAGTTGAG
TCCTGCTTCCGCTCTTGAAGTGGCATCATAGCAGGTCTCTTAGTAACATT
TCACACATCCTGTCATCATACTTCTGTTTCTTTCTTTTTTTAATTTTTTT
TTCTCTTATTCTTTGACTATGCTATACTTTGATAGCAACGCTGGTGTTCA
GCTGCTAACGTGACACCAGGCTGCTTGGGTTCGCCACCTTTCTAAGGATT
ATCCTACCTTGGCTTTCCATGCTTCTATCAACAATTCCTTCGGGAAAGGC
TCGTTGATCCAGCTACTGAGACAATTTTCTTCTTTGCACTCGGACCGGAA
GCAGATTTCCGTGGGATTCATTGGATACCCCAACACTGGAAAGTCTTCCG
TCATCAACACCTTGCGCAAGAAGAAGGTGTGCACTGTGGCTCCTATCCCG
GGTGAAACCAAGGTGTGGCAGTACGTTACCTTGATGAAGAGGATCTACCT
CATTGATTGCCCTGGTGTGGTTCCTCCGAACCCGAACGACTCTCCAGAGG
ATATTCTTCTCCGTGGTGTCGTCCGTGTGGAGAACGTAGAGAACCCTGAG
CAGTACATCCCAGCTATTCTCAAGCGTGTTCAGCCTAAGCATTTGGAGCG
TACCTACGGTATCAAGAGCACTGAAGACCCCGTCGAGTTCCTCAGTCTCC
TTGCCCGCAAGGGCGGTCGACTCCTCCGTGGTGGAGAGCCTGATCTTGAC
GGTGTTGCCAAGATGGTCATTAACGACTTCCTTCGTGGAAAGATCCCTTG
GTTCACTGCCCCCCCTCACAACAGTGGCGAGGAGGGCGAGAAGATTGAAG
GTCGTGAAGGTCGCCTCGGCGAAATGAGCCGCAAGCGGAAGCTTGATGAG
ACCGCTCCTGAGGCTGCTGATACCACAGAAGCGGCTGAGAAGCAAGAGTC
TGGCTCGGGAGATGAGTTCGAGGGCTTTGACGAGGAAGATGATGATGACG
ACTCGATCGCCAATCTTGAGGTCAGCGACGAGGAGAGCGGAGCGGAGGAA
GATTAAACAGGAGCTCTATTCTGAACAATTTTCAACACCTCGCGGATCGC
AGATCCGCCCGTCACTAACCCATTGACCTTGGGCCCATGTCGTCGCTCTT
TCAACCGGAGCGGAACTGACAGTCACGCCATGCCCAACCGATCATCGGGC
CGCTGACAAAAAGCTGCATGGCCCACTGGCATCCTTTTGACGATGCCGAT
CGATCGGAGGTCGGAACGCCACCGAGCATATCCAGTTCAGGCCTGGTTTC
ACACGGCCTTGCTGACATGCTACCTGGACAGCTTGCCTGCCAGTACATGT
CAACCCATGCAGAAAAGACTGGGATCCGAGCCAGCTATTGCTCGGCCCCA
CTGCTTTTACTTTTAGATACCCGCATAGTGCTGAGAAGCATAGCATCAAA
TGAAGAGAGAG back to topCoding sequence (CDS) from alignment at ch6:2677909..2680569- >KJC3_008672-T1 ID=KJC3_008672-T1|Name=KJC3_008672-T1|organism=Aspergillus niger KJC3|type=CDS|length=5049bp|location=Sequence derived from alignment at ch6:2677909..2680569- (Aspergillus niger KJC3)
GCTGCTTGGGTTCGCCACCTTTCTAAGGATTATCCTACCTTGGCTTTCCA
TGCTTCTATCAACAATTCCTTCGGGAAAGGCTCGTTGATCCAGCTACTGA
GACAATTTTCTTCTTTGCACTCGGACCGGAAGCAGATTTCCGTGGGATTC
ATTGGATACCCCAACACTGGAAAGTCTTCCGTCATCAACACCTTGCGCAA
GAAGAAGGTGTGCACTGTGGCTCCTATCCCGGGTGAAACCAAGGTGTGGC
AGTACGTTACCTTGATGAAGAGGATCTACCTCATTGATTGCCCTGGTGTG
GTTCCTCCGAACCCGAACGACTCTCCAGAGGATATTCTTCTCCGTGGTGT
CGTCCGTGTGGAGAACGTAGAGAACCCTGAGCAGTACATCCCAGCTATTC
TCAAGCGTGTTCAGCCTAAGCATTTGGAGCGTACCTACGGTATCAAGAGC
ACTGAAGACCCCGTCGAGTTCCTCAGTCTCCTTGCCCGCAAGGGCGGTCG
ACTCCTCCGTGGTGGAGAGCCTGATCTTGACGGTGTTGCCAAGATGGTCA
TTAACGACTTCCTTCGTGGAAAGATCCCTTGGTTCACTGCCCCCCCTCAC
AACAGTGGCGAGGAGGGCGAGAAGATTGAAGGTCGTGAAGGTCGCCTCGG
CGAAATGAGCCGCAAGCGGAAGCTTGATGAGACCGCTCCTGAGGCTGCTG
ATACCACAGAAGCGGCTGAGAAGCAAGAGTCTGGCTCGGGAGATGAGTTC
GAGGGCTTTGACGAGGAAGATGATGATGACGACTCGATCGCCAATCTTGA
GGTCAGCGACGAGGAGAGCGGAGCGGAGGAAGATTAAAGATGCGAAGAAG
TTGAGGACCTTGAATATGCTCAAGGATGGTAAACCCCAACGTAACGCTGA
AGGAAAGATCACCAAGGCTGCTTCGTACCAGTCTCGAGACGCCCCCGTCG
CTAGGATTGAACCCAACCGTAAATGGTTTGGAAACACCAGAGTGATCTCG
CAAGAGGCTCTGTCCTCTTTCCGTGAGGCGGTCGCTGAGCGTGCTTCTGA
TCCGTATTCAGTCTTGCTCAAGACCAACAAACTTCCCATGAGCCTGATCA
GAGATGACAAGGGTGTAAATGGATTGAAGCAGCACCAGGCCAAGATGGCC
ATCGAGACGAATCCCTTCAGTGACACCTTCGGGCCCAAGGCTCAGAGGAA
ACGTGTCAAGTTGGGTGTTTCGTCGCTTGCGGATCTGGCTGGCGAGTCCG
CCAAGATGCACGACGCCTATGTTGAGAAGTCGGACCATGCTACTCATGAA
GATGGTACTATGGTGGTGAACGGTGATGACGTCGCAGTAGAGGAGGACTC
TAGTGTCGCGCCCATCGCAAAGGAGGCTGTCTTCCTTAAGGGACAGAGTA
AGCGTATTTGGAACGAACTTTACAAGGTCATTGATTCCTCCGATGTTGTC
ATCCATCTCCTTGATGCTCGTGATCCGGAAGGTACACGGTGCAGGAGTAT
CGAAAAATACATCCGGGAGGAGGCTCCTCACAAGCACTTGATTTTCGTCT
TGAACAAGTGTGATCTTGTGCCTACAGGCGTGGCGATGGGTACCTTCAAG
AAGGAAGCCTCTCGTAAAGAGCGGCAGGGGAAGACTGGAGATGGCATGGG
GAACGTCCGGGTAAAGGGTGAAAACTTTTACAGGCTGCTTGGGTTCGCCA
CCTTTCTAAGGATTATCCTACCTTGGCTTTCCATGCTTCTATCAACAATT
CCTTCGGGAAAGGCTCGTTGATCCAGCTACTGAGACAATTTTCTTCTTTG
CACTCGGACCGGAAGCAGATTTCCGTGGGATTCATTGGATACCCCAACAC
TGGAAAGTCTTCCGTCATCAACACCTTGCGCAAGAAGAAGGTGTGCACTG
TGGCTCCTATCCCGGGTGAAACCAAGGTGTGGCAGTACGTTACCTTGATG
AAGAGGATCTACCTCATTGATTGCCCTGGTGTGGTTCCTCCGAACCCGAA
CGACTCTCCAGAGGATATTCTTCTCCGTGGTGTCGTCCGTGTGGAGAACG
TAGAGAACCCTGAGCAGTACATCCCAGCTATTCTCAAGCGTGTTCAGCCT
AAGCATTTGGAGCGTACCTACGGTATCAAGAGCACTGAAGACCCCGTCGA
GTTCCTCAGTCTCCTTGCCCGCAAGGGCGGTCGACTCCTCCGTGGTGGAG
AGCCTGATCTTGACGGTGTTGCCAAGATGGTCATTAACGACTTCCTTCGT
GGAAAGATCCCTTGGTTCACTGCCCCCCCTCACAACAGTGGCGAGGAGGG
CGAGAAGATTGAAGGTCGTGAAGGTCGCCTCGGCGAAATGAGCCGCAAGC
GGAAGCTTGATGAGACCGCTCCTGAGGCTGCTGATACCACAGAAGCGGCT
GAGAAGCAAGAGTCTGGCTCGGGAGATGAGTTCGAGGGCTTTGACGAGGA
AGATGATGATGACGACTCGATCGCCAATCTTGAGGTCAGCGACGAGGAGA
GCGGAGCGGAGGAAGATTAAAGATGCGAAGAAGTTGAGGACCTTGAATAT
GCTCAAGGATGGTAAACCCCAACGTAACGCTGAAGGAAAGATCACCAAGG
CTGCTTCGTACCAGTCTCGAGACGCCCCCGTCGCTAGGATTGAACCCAAC
CGTAAATGGTTTGGAAACACCAGAGTGATCTCGCAAGAGGCTCTGTCCTC
TTTCCGTGAGGCGGTCGCTGAGCGTGCTTCTGATCCGTATTCAGTCTTGC
TCAAGACCAACAAACTTCCCATGAGCCTGATCAGAGATGACAAGGGTGTA
AATGGATTGAAGCAGCACCAGGCCAAGATGGCCATCGAGACGAATCCCTT
CAGTGACACCTTCGGGCCCAAGGCTCAGAGGAAACGTGTCAAGTTGGGTG
TTTCGTCGCTTGCGGATCTGGCTGGCGAGTCCGCCAAGATGCACGACGCC
TATGTTGAGAAGTCGGACCATGCTACTCATGAAGATGGTACTATGGTGGT
GAACGGTGATGACGTCGCAGTAGAGGAGGACTCTAGTGTCGCGCCCATCG
CAAAGGAGGCTGTCTTCCTTAAGGGACAGAGTAAGCGTATTTGGAACGAA
CTTTACAAGGTCATTGATTCCTCCGATGTTGTCATCCATCTCCTTGATGC
TCGTGATCCGGAAGGTACACGGTGCAGGAGTATCGAAAAATACATCCGGG
AGGAGGCTCCTCACAAGCACTTGATTTTCGTCTTGAACAAGTGTGATCTT
GTGCCTACAGGCGTGGCGATGGGTACCTTCAAGAAGGAAGCCTCTCGTAA
AGAGCGGCAGGGGAAGACTGGAGATGGCATGGGGAACGTCCGGGTAAAGG
GTGAAAACTTTTACAGGCTGCTTGGGTTCGCCACCTTTCTAAGGATTATC
CTACCTTGGCTTTCCATGCTTCTATCAACAATTCCTTCGGGAAAGGCTCG
TTGATCCAGCTACTGAGACAATTTTCTTCTTTGCACTCGGACCGGAAGCA
GATTTCCGTGGGATTCATTGGATACCCCAACACTGGAAAGTCTTCCGTCA
TCAACACCTTGCGCAAGAAGAAGGTGTGCACTGTGGCTCCTATCCCGGGT
GAAACCAAGGTGTGGCAGTACGTTACCTTGATGAAGAGGATCTACCTCAT
TGATTGCCCTGGTGTGGTTCCTCCGAACCCGAACGACTCTCCAGAGGATA
TTCTTCTCCGTGGTGTCGTCCGTGTGGAGAACGTAGAGAACCCTGAGCAG
TACATCCCAGCTATTCTCAAGCGTGTTCAGCCTAAGCATTTGGAGCGTAC
CTACGGTATCAAGAGCACTGAAGACCCCGTCGAGTTCCTCAGTCTCCTTG
CCCGCAAGGGCGGTCGACTCCTCCGTGGTGGAGAGCCTGATCTTGACGGT
GTTGCCAAGATGGTCATTAACGACTTCCTTCGTGGAAAGATCCCTTGGTT
CACTGCCCCCCCTCACAACAGTGGCGAGGAGGGCGAGAAGATTGAAGGTC
GTGAAGGTCGCCTCGGCGAAATGAGCCGCAAGCGGAAGCTTGATGAGACC
GCTCCTGAGGCTGCTGATACCACAGAAGCGGCTGAGAAGCAAGAGTCTGG
CTCGGGAGATGAGTTCGAGGGCTTTGACGAGGAAGATGATGATGACGACT
CGATCGCCAATCTTGAGGTCAGCGACGAGGAGAGCGGAGCGGAGGAAGAT
TAAAGATGCGAAGAAGTTGAGGACCTTGAATATGCTCAAGGATGGTAAAC
CCCAACGTAACGCTGAAGGAAAGATCACCAAGGCTGCTTCGTACCAGTCT
CGAGACGCCCCCGTCGCTAGGATTGAACCCAACCGTAAATGGTTTGGAAA
CACCAGAGTGATCTCGCAAGAGGCTCTGTCCTCTTTCCGTGAGGCGGTCG
CTGAGCGTGCTTCTGATCCGTATTCAGTCTTGCTCAAGACCAACAAACTT
CCCATGAGCCTGATCAGAGATGACAAGGGTGTAAATGGATTGAAGCAGCA
CCAGGCCAAGATGGCCATCGAGACGAATCCCTTCAGTGACACCTTCGGGC
CCAAGGCTCAGAGGAAACGTGTCAAGTTGGGTGTTTCGTCGCTTGCGGAT
CTGGCTGGCGAGTCCGCCAAGATGCACGACGCCTATGTTGAGAAGTCGGA
CCATGCTACTCATGAAGATGGTACTATGGTGGTGAACGGTGATGACGTCG
CAGTAGAGGAGGACTCTAGTGTCGCGCCCATCGCAAAGGAGGCTGTCTTC
CTTAAGGGACAGAGTAAGCGTATTTGGAACGAACTTTACAAGGTCATTGA
TTCCTCCGATGTTGTCATCCATCTCCTTGATGCTCGTGATCCGGAAGGTA
CACGGTGCAGGAGTATCGAAAAATACATCCGGGAGGAGGCTCCTCACAAG
CACTTGATTTTCGTCTTGAACAAGTGTGATCTTGTGCCTACAGGCGTGGC
GATGGGTACCTTCAAGAAGGAAGCCTCTCGTAAAGAGCGGCAGGGGAAGA
CTGGAGATGGCATGGGGAACGTCCGGGTAAAGGGTGAAAACTTTTACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008672-T1.utr3p1 | KJC3_008672-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008672-T1.utr5p1 | KJC3_008672-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR030378 |
| DBxref | InterPro:IPR023179 |
| DBxref | InterPro:IPR012971 |
| DBxref | InterPro:IPR006073 |
| DBxref | PFAM:PF08153 |
| Product | GTPase required for pre-60S ribosomal subunit nuclear export and maturation |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2677909..2680569 - |
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