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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2800721..2801648+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008712-T1 ID=KJC3_008712-T1|Name=KJC3_008712-T1|organism=Aspergillus niger KJC3|type=mRNA|length=928bp|location=Sequence derived from alignment at ch6:2800721..2801648+ (Aspergillus niger KJC3)
CCCTGAACCAAATATTTAAGCTTACCGATGGCATCATGACTCCACCTCCT
CAGTAGCATTCATATATTTAGGCCACATCACACTCATCCATCCAACTTTA
AGCATTCCAGACCCAATCCACAATCCACATCTCACCACCTGCATAGTAGT
ACTACACCATGTACACAACAGACACCCTCCCAACAAGCTTCTGCATAGCC
CAAGCAATCGGCCTCAGCGGCACCGCTTGGCTCTCGGGTACTACTCCCCA
TCCATTCTCAACCCACCAAACCCCAACTAACAATGATATACACAGGAAAC
ATCTTCTCCCTATCATTAATGACAGTCCCAGCCCTTCTTCAATCCCACAA
GGAGCACAAAATCCCCCTATCAACAATCACAAAACAATGGGCCCTTGTCT
ACGAAACGGGAAAGAACCGCGCTCCCCCAATTGCTCTCTTCACCGCTGCC
ACCCTCTTGTATCTATCCTGGGCGACGAGGGCAGAGAGTACGCTGGCGGC
CATCGCACCACGGGGAGCCACCACCACGTATGCAATCTCTGCTGCATTGA
CGATTGCGATCGTGCCGTGGACCATTCTGGCCATGAAGGGGACGAATGAT
GCCTTGATGGAGAAGGCGCAGGTGGGCGTACAGGAGGAGAAGAATCCCCA
GGAGGGGGAGACAGTGTTGGGTTTGTTGAACAGATGGGCGTTACTTAATG
GTGCTAGGGCTGTGTGGCCCCTCGCTGGGTTCTTGGTGGGGTTGTCGGCT
ATTGTGCCTTGATTTTATTATTTGGAGGGTTATGTGAGGGAGGGATGCGT
TTGGGGAATTGGGAAATTTGGCGTTAATGATAATGTAGGGTTGTTTTGCA
TAATGAATTGATGTACATTGGATGTATTACACCCGTCATTGGTAGCACAA
GAAGCTGAACGGCAATTCTTGGTAATAC back to topCoding sequence (CDS) from alignment at ch6:2800721..2801648+ >KJC3_008712-T1 ID=KJC3_008712-T1|Name=KJC3_008712-T1|organism=Aspergillus niger KJC3|type=CDS|length=1092bp|location=Sequence derived from alignment at ch6:2800721..2801648+ (Aspergillus niger KJC3)
ATGTACACAACAGACACCCTCCCAACAAGCTTCTGCATAGCCCAAGCAAT
CGGCCTCAGCGGCACCGCTTGGCTCTCGGGAAACATCTTCTCCCTATCAT
TAATGACAGTCCCAGCCCTTCTTCAATCCCACAAGGAGCACAAAATCCCC
CTATCAACAATCACAAAACAATGGGCCCTTGTCTACGAAACGGGAAAGAA
CCGCGCTCCCCCAATTGCTCTCTTCACCGCTGCCACCCTCTTGTATCTAT
CCTGGGCGACGAGGGCAGAGAGTACGCTGGCGGCCATCGCACCACGGGGA
GCCACCACCACGTATGCAATCTCTGCTGCATTGACGATTGCGATCGTGCC
GTGGACCATTCTGGCCATGAAGGGGACGAATGATGCCTTGATGGAGAAGG
CGCAGGTGGGCGTACAGGAGGAGAAGAATCCCCAGGAGGGGGAGACAGTG
TTGGGTTTGTTGAACAGATGGGCGTTACTTAATGGTGCTAGGGCTGTGTG
GCCCCTCGCTGGGTTCTTGGTGGGGTTGTCGGCTATTGTGCCTTGAATGT
ACACAACAGACACCCTCCCAACAAGCTTCTGCATAGCCCAAGCAATCGGC
CTCAGCGGCACCGCTTGGCTCTCGGGAAACATCTTCTCCCTATCATTAAT
GACAGTCCCAGCCCTTCTTCAATCCCACAAGGAGCACAAAATCCCCCTAT
CAACAATCACAAAACAATGGGCCCTTGTCTACGAAACGGGAAAGAACCGC
GCTCCCCCAATTGCTCTCTTCACCGCTGCCACCCTCTTGTATCTATCCTG
GGCGACGAGGGCAGAGAGTACGCTGGCGGCCATCGCACCACGGGGAGCCA
CCACCACGTATGCAATCTCTGCTGCATTGACGATTGCGATCGTGCCGTGG
ACCATTCTGGCCATGAAGGGGACGAATGATGCCTTGATGGAGAAGGCGCA
GGTGGGCGTACAGGAGGAGAAGAATCCCCAGGAGGGGGAGACAGTGTTGG
GTTTGTTGAACAGATGGGCGTTACTTAATGGTGCTAGGGCTGTGTGGCCC
CTCGCTGGGTTCTTGGTGGGGTTGTCGGCTATTGTGCCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008712-T1.utr5p1 | KJC3_008712-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008712-T1.utr3p1 | KJC3_008712-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | PFAM:PF08592 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2800721..2801648 + |
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