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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2859786..2863797+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008731-T1 ID=KJC3_008731-T1|Name=KJC3_008731-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4012bp|location=Sequence derived from alignment at ch6:2859786..2863797+ (Aspergillus niger KJC3)
CTCACCCCCTATTCGCATCCAACTACGACGGTCAAGAATGAGATACATAA
TTGTATGTGTCATTTCATACTTGTTTCATTGTGGAATATATACCGCTGGA
CGCACAATCTCATAAAATGTTTATAAATGGCTCCTTTGACTGCGACCCAG
GTATATAATTGTCTCCACTATTGTCCGTGGCCTCCCAATATATTCGGGCC
CAGAGAATTATGGGGTGTCGGCTACGTTATACACCAACTTCTGTCCGCTG
ACCTTGCCATCTTTCATATCCTGCAGACCCTCTACCACCCCTTGGAGTCC
CCGTGGCCCCAGCTTGACAGGATGAGGCTTGACCTTTCCCTCTGCAAGGA
AAGTGGCTGCCTTGCTCATAAACTGTCCCGCAAACTCTCGATCCTCCGGC
TTGGCTGGGATAATACCACCGCCAAAGTCAAAGTCTTCACCAAAGGCAGT
GTATCCTATGGTGAAAAGACTGCGGACGTCGTCCCGGGGAACGGCCACCT
TCAGCAGGGAAGAATAATCGCCGCCCTTGCTAGAGATCACTTCGCCACAG
AACTTAGCACTAGACTCAACAGCAACAGTGTCAAAGACTAGCGACAGCTT
ATCCTGGGCGTAATCCTTGATGGCTTGGACTGCATTCGCATCTTTATAGT
CGAACACTGCGTCTGCACCAAGACTCTTCACGAGATCAAAGTTTTGCGCC
GAACAAGTTGTCAACACAGTGTACCCCGACAACTTGGCAAACTGGATGGC
CAGAGTACCGGTGGCTGTGGAGCCACCGTATATAAGAATCAACTCAGGCT
GGGCCAGTGGGGCATCTGGTGGTGCGAGCTTCAGACTCTGATACAGGCCC
TGGCCCACCGTGATTGTCCCCAAGCCAAGGGTTGAAGCTTCCTCAAAGCT
GAGACGGTCGGGAATAGCGATCTGAAGATCAGCTTTGGGGATGCAGTATT
CAGCAAAGGCTCCACTTTCCGGATTGTTAGAATTGCATCCTTGGACCCAA
CCGCAAACACGGTCGCCCTTGCGGAAGGCTTTCTTGACGCCCTTGCCGAC
CTCTTCGACGACACCGGAGTAATCATTCCCAATGACTTGTCCAGGAGGTT
TCCGGTCGGCGCTCTTCCAGTCGGTAGGGTTGAGAGCGACACTAACTGTC
TTGACCAGAAGACAGTCGTCAGGCAGAGTGGGGATAGGGCGATCCACCAC
GTCGCGACTACCGGGCGCAGTGATTACCAGGGCTTTGGGCATGATGAGAT
GAGTGTACTGGTATGGGGCGAGTTACTGGAAAACAGGTGAGAGTTACAGA
CAAAGACAAAGACAAACGAGGTGGCAGAGGGGTTAATAAATGTTACATGA
CTGCAGATTATCACGTCACAGCTTCTGTGCCGGACGATGTCCTTCTTATC
TCCGCTTCTTCACTGAAGGGATGACAGCTAAGCATTGTATTATTAATCGA
GGTCATTAATAATCCACGATGCTAAGGCTGGCTTGCTGCGATGTGATTCG
AGATCGGGACTCGCTAACCAGCGCCGGTCCCGAAATGGATCCGTTCAGTA
GTTTTAGCTTCTCTCCAGCCGATCCATGTTCTCCAACAGTCAACTATCTA
CCTCTGTTTCATTCTTCTTCACCTCACTGCTATTGATGTCGGCCCGGCCC
AATGACATTCGTCGTGTTGCCAACTTCGTCTCTGCCCAACCCAGCCCGAC
CGACTCCCCGTCCACGGCTCCGCCAGCGGGAATGACGCCTCCTCCCCGCG
AGCGGGTCCCTCGGGCCTGTGAACACTGCCGGGCCCGCAAGATCAAATGC
AATGGCCAGCAGCCGTGCAATGCCTGCGCGCGCCATCCAGAGCGATGTCT
CTACCGGACAGGAAGCATTCGCCAGAGGAAGAACCGTCGCACCAAGGAAG
CCCCGCGACCACCAGCTACCTTACTCCCTCTCCCGACCACCGACTCGCCG
ACTACTCCAAGCGACTGGTCCCACACCAGTCTAAGCGATGGCCCGGCGCA
GTATAAGCGACACCATGAGCTCCGTGCTGGCATCGGCGTACAGAACCCGG
AGACCGGGGCATTTCAGTTCTATGGTAAGTTCCGTTCCCTACGTTTGGCT
GGCTCTGTTAACCCTCGAAGGACCCTCTTCCGGCTTCTGCTTCATCCATC
GGGTCTACCAACGCATCAAGCAAGGCTCGTCTAGTGAGCCGCTGCTTGCT
CGACGGAGCTGCTCCATTCCAGATGCTATCCACCGATTTGGTCTGGAGCG
CTTCATGTTTGCCCGGCCAGGAGATTCGGATCCGCGGCGGACTCATTTTC
CGTCTCAGATGTTCCTCCCCAGGGAGTTGGGGGATCAGTTCATTGAGGCC
TATTTCCGCATTATGCACCCGCAAATACCCATACTAATAAAGTCCGAGAT
TGACGATGCTTGGAATCAAATGTGGGAGTCTCCTGTACGTGACCACAGCG
TTAAAAATCAGGACATCCTATTCATGGTGCTGGCTATCGGCGCTCGAGTC
GCCAACCTGAAGGGGAAGCAAACCGAAAGCAGTGTCGCGGCTTGGGCCGA
TTACTTTTCCAGTCGAGTCTCTGAGGGGCCCATCTTTCTGCAGGAACCGA
GTATCCGAGGTGTACACTTGATGCTGCTGAAGGTGCGTCACCGACATCTG
CCACTTGAAACTCGCTAATCCAATAAAAGTCAATGTACGCTTTGCAGCTG
ATGCGACAAAATGATGCTTATCTCTACCTGGGTCACGCCACTCGCACCTG
TCTCGTACTAGGTTTGCACCGGGCCCAGGTCACCGATGGCCGCGATCCCA
CCGTACACCGGCTGCGTTTGACCTTTTGGACGACGTTCTTTTGCGAGCGC
ATATCTTCTCTGTACATGGGTCGTCCGTCGAGCCTTTCTGACCGACAAAT
TGACACAGCCTATCCCGAGGACCTGCCGCCGAATCCCTATGACAGCACTT
GTGCGCCCATGCAAGAATGCGCATTCATCCGAGCCATGGGCGAGATCGCC
AAGCTGGCGGATCGCATCTCCATCGAGATATATTCGCCGGCCAGCATTAA
AAACCCTACGGACCTGGACAAGCTCAACCAAATCAGCGTTGAATGCGACC
ACGCCCTCCAAGCTGTCACCCCGACACTACCAAGTTACCTGCACTTCTTC
GATGACAGCGTTCCAATTGGCGAGCCCTGGCAGGAGATCCAACGCCTGAG
TCTTGGATTCTGCTACTACGTCGTCCGGATGCTCCTCTCCCGCCCGGCAC
TGGTGCTCACCACATTTTTCTCCTCGGTACAAGAAGCCCAGATCGCCACT
GGGTGCACTGAGCTCCAATCTTGCATCAATTCATCGACTTCCGCAGCGCG
GAATTTGATCCACCTCGCTCATGACGTCTATTTCCGTCGTTTCTCAGATA
TACGCTATGACGGAGCTCTAGCTTCGTTCCTTCTGTCTGCGTCGCTGACT
CTTTTATATGATGTGCTCAATCTAGGAACTGATCCGGACCGAGCTAGGCA
GACATTCACAGTCGTGGAAAAGGCGATAAAGTGCCTCGATGAGATAGAGC
ATACGGGGTACACGTCGGGCAAGGCGTTGAGCCTGGACCTGATGAGAGTG
GCCAAGCAAGCGGTGCAAGCGGCAGATCCTGTGGTGGACACTAATCAGGT
CTTGATGGATGCGTTCCCGTGGTTAGAGTATGTTTCCCCCTCTTTTTGTC
AGACTATGCTGACTGAGTAGTAACTGGGCATCTGCTCAGGTCGGGGAGAA
TCCCGATCTGTCAATGTATACATATCCCCCAGCGGATGTGACAGTCATTG
GCTCATTGGCGGGGAATGATGTCGGTTGGACGGAAATGGAGGGCAACCAT
CTCTGGTTGGGCAATGGATTCGAACCGAATGCGATGCCGGGGTGTTTATT
CTAGGCGTGAAAAGGGTAGAAGGGATAGAACAGCACATATACAGACTAAT
AGATCATTCATGCGTGCCGGCGGCTATTCTGGCATTGTCTCCCGGCCACG
TTTCTCCAGCTG back to topCoding sequence (CDS) from alignment at ch6:2859786..2863797+ >KJC3_008731-T1 ID=KJC3_008731-T1|Name=KJC3_008731-T1|organism=Aspergillus niger KJC3|type=CDS|length=5481bp|location=Sequence derived from alignment at ch6:2859786..2863797+ (Aspergillus niger KJC3)
ATGGCCCGGCGCAGTATAAGCGACACCATGAGCTCCGTGCTGGCATCGGC
GTACAGAACCCGGAGACCGGGGCATTTCAGTTCTATGGTAAGTTCCGTTC
CCTACGTTTGGCTGGCTCTGTTAACCCTCGAAGGACCCTCTTCCGGCTTC
TGCTTCATCCATCGGGTCTACCAACGCATCAAGCAAGGCTCGTCTAGTGA
GCCGCTGCTTGCTCGACGGAGCTGCTCCATTCCAGATGCTATCCACCGAT
TTGGTCTGGAGCGCTTCATGTTTGCCCGGCCAGGAGATTCGGATCCGCGG
CGGACTCATTTTCCGTCTCAGATGTTCCTCCCCAGGGAGTTGGGGGATCA
GTTCATTGAGGCCTATTTCCGCATTATGCACCCGCAAATACCCATACTAA
TAAAGTCCGAGATTGACGATGCTTGGAATCAAATGTGGGAGTCTCCTGTA
CGTGACCACAGCGTTAAAAATCAGGACATCCTATTCATGGTGCTGGCTAT
CGGCGCTCGAGTCGCCAACCTGAAGGGGAAGCAAACCGAAAGCAGTGTCG
CGGCTTGGGCCGATTACTTTTCCAGTCGAGTCTCTGAGGGGCCCATCTTT
CTGCAGGAACCGAGTATCCGAGGTGTACACTTGATGCTGCTGAAGTCAAT
GTACGCTTTGCAGCTGATGCGACAAAATGATGCTTATCTCTACCTGGGTC
ACGCCACTCGCACCTGTCTCGTACTAGGTTTGCACCGGGCCCAGGTCACC
GATGGCCGCGATCCCACCGTACACCGGCTGCGTTTGACCTTTTGGACGAC
GTTCTTTTGCGAGCGCATATCTTCTCTGTACATGGGTCGTCCGTCGAGCC
TTTCTGACCGACAAATTGACACAGCCTATCCCGAGGACCTGCCGCCGAAT
CCCTATGACAGCACTTGTGCGCCCATGCAAGAATGCGCATTCATCCGAGC
CATGGGCGAGATCGCCAAGCTGGCGGATCGCATCTCCATCGAGATATATT
CGCCGGCCAGCATTAAAAACCCTACGGACCTGGACAAGCTCAACCAAATC
AGCGTTGAATGCGACCACGCCCTCCAAGCTGTCACCCCGACACTACCAAG
TTACCTGCACTTCTTCGATGACAGCGTTCCAATTGGCGAGCCCTGGCAGG
AGATCCAACGCCTGAGTCTTGGATTCTGCTACTACGTCGTCCGGATGCTC
CTCTCCCGCCCGGCACTGGTGCTCACCACATTTTTCTCCTCGGTACAAGA
AGCCCAGATCGCCACTGGGTGCACTGAGCTCCAATCTTGCATCAATTCAT
CGACTTCCGCAGCGCGGAATTTGATCCACCTCGCTCATGACGTCTATTTC
CGTCGTTTCTCAGATATACGCTATGACGGAGCTCTAGCTTCGTTCCTTCT
GTCTGCGTCGCTGACTCTTTTATATGATGTGCTCAATCTAGGAACTGATC
CGGACCGAGCTAGGCAGACATTCACAGTCGTGGAAAAGGCGATAAAGTGC
CTCGATGAGATAGAGCATACGGGGTACACGTCGGGCAAGGCGTTGAGCCT
GGACCTGATGAGAGTGGCCAAGCAAGCGGTGCAAGCGGCAGATCCTGTGG
TGGACACTAATCAGGTCTTGATGGATGCGTTCCCGTGGTTAGATAACTGG
GCATCTGCTCAGGTCGGGGAGAATCCCGATCTGTCAATGTATACATATCC
CCCAGCGGATGTGACAGTCATTGGCTCATTGGCGGGGAATGATGTCGGTT
GGACGGAAATGGAGGGCAACCATCTCTGGTTGGGCAATGGATTCGAACCG
AATGCGATGCCGGGGTGTTTATTCTAGATGGCCCGGCGCAGTATAAGCGA
CACCATGAGCTCCGTGCTGGCATCGGCGTACAGAACCCGGAGACCGGGGC
ATTTCAGTTCTATGGTAAGTTCCGTTCCCTACGTTTGGCTGGCTCTGTTA
ACCCTCGAAGGACCCTCTTCCGGCTTCTGCTTCATCCATCGGGTCTACCA
ACGCATCAAGCAAGGCTCGTCTAGTGAGCCGCTGCTTGCTCGACGGAGCT
GCTCCATTCCAGATGCTATCCACCGATTTGGTCTGGAGCGCTTCATGTTT
GCCCGGCCAGGAGATTCGGATCCGCGGCGGACTCATTTTCCGTCTCAGAT
GTTCCTCCCCAGGGAGTTGGGGGATCAGTTCATTGAGGCCTATTTCCGCA
TTATGCACCCGCAAATACCCATACTAATAAAGTCCGAGATTGACGATGCT
TGGAATCAAATGTGGGAGTCTCCTGTACGTGACCACAGCGTTAAAAATCA
GGACATCCTATTCATGGTGCTGGCTATCGGCGCTCGAGTCGCCAACCTGA
AGGGGAAGCAAACCGAAAGCAGTGTCGCGGCTTGGGCCGATTACTTTTCC
AGTCGAGTCTCTGAGGGGCCCATCTTTCTGCAGGAACCGAGTATCCGAGG
TGTACACTTGATGCTGCTGAAGTCAATGTACGCTTTGCAGCTGATGCGAC
AAAATGATGCTTATCTCTACCTGGGTCACGCCACTCGCACCTGTCTCGTA
CTAGGTTTGCACCGGGCCCAGGTCACCGATGGCCGCGATCCCACCGTACA
CCGGCTGCGTTTGACCTTTTGGACGACGTTCTTTTGCGAGCGCATATCTT
CTCTGTACATGGGTCGTCCGTCGAGCCTTTCTGACCGACAAATTGACACA
GCCTATCCCGAGGACCTGCCGCCGAATCCCTATGACAGCACTTGTGCGCC
CATGCAAGAATGCGCATTCATCCGAGCCATGGGCGAGATCGCCAAGCTGG
CGGATCGCATCTCCATCGAGATATATTCGCCGGCCAGCATTAAAAACCCT
ACGGACCTGGACAAGCTCAACCAAATCAGCGTTGAATGCGACCACGCCCT
CCAAGCTGTCACCCCGACACTACCAAGTTACCTGCACTTCTTCGATGACA
GCGTTCCAATTGGCGAGCCCTGGCAGGAGATCCAACGCCTGAGTCTTGGA
TTCTGCTACTACGTCGTCCGGATGCTCCTCTCCCGCCCGGCACTGGTGCT
CACCACATTTTTCTCCTCGGTACAAGAAGCCCAGATCGCCACTGGGTGCA
CTGAGCTCCAATCTTGCATCAATTCATCGACTTCCGCAGCGCGGAATTTG
ATCCACCTCGCTCATGACGTCTATTTCCGTCGTTTCTCAGATATACGCTA
TGACGGAGCTCTAGCTTCGTTCCTTCTGTCTGCGTCGCTGACTCTTTTAT
ATGATGTGCTCAATCTAGGAACTGATCCGGACCGAGCTAGGCAGACATTC
ACAGTCGTGGAAAAGGCGATAAAGTGCCTCGATGAGATAGAGCATACGGG
GTACACGTCGGGCAAGGCGTTGAGCCTGGACCTGATGAGAGTGGCCAAGC
AAGCGGTGCAAGCGGCAGATCCTGTGGTGGACACTAATCAGGTCTTGATG
GATGCGTTCCCGTGGTTAGATAACTGGGCATCTGCTCAGGTCGGGGAGAA
TCCCGATCTGTCAATGTATACATATCCCCCAGCGGATGTGACAGTCATTG
GCTCATTGGCGGGGAATGATGTCGGTTGGACGGAAATGGAGGGCAACCAT
CTCTGGTTGGGCAATGGATTCGAACCGAATGCGATGCCGGGGTGTTTATT
CTAGATGGCCCGGCGCAGTATAAGCGACACCATGAGCTCCGTGCTGGCAT
CGGCGTACAGAACCCGGAGACCGGGGCATTTCAGTTCTATGGTAAGTTCC
GTTCCCTACGTTTGGCTGGCTCTGTTAACCCTCGAAGGACCCTCTTCCGG
CTTCTGCTTCATCCATCGGGTCTACCAACGCATCAAGCAAGGCTCGTCTA
GTGAGCCGCTGCTTGCTCGACGGAGCTGCTCCATTCCAGATGCTATCCAC
CGATTTGGTCTGGAGCGCTTCATGTTTGCCCGGCCAGGAGATTCGGATCC
GCGGCGGACTCATTTTCCGTCTCAGATGTTCCTCCCCAGGGAGTTGGGGG
ATCAGTTCATTGAGGCCTATTTCCGCATTATGCACCCGCAAATACCCATA
CTAATAAAGTCCGAGATTGACGATGCTTGGAATCAAATGTGGGAGTCTCC
TGTACGTGACCACAGCGTTAAAAATCAGGACATCCTATTCATGGTGCTGG
CTATCGGCGCTCGAGTCGCCAACCTGAAGGGGAAGCAAACCGAAAGCAGT
GTCGCGGCTTGGGCCGATTACTTTTCCAGTCGAGTCTCTGAGGGGCCCAT
CTTTCTGCAGGAACCGAGTATCCGAGGTGTACACTTGATGCTGCTGAAGT
CAATGTACGCTTTGCAGCTGATGCGACAAAATGATGCTTATCTCTACCTG
GGTCACGCCACTCGCACCTGTCTCGTACTAGGTTTGCACCGGGCCCAGGT
CACCGATGGCCGCGATCCCACCGTACACCGGCTGCGTTTGACCTTTTGGA
CGACGTTCTTTTGCGAGCGCATATCTTCTCTGTACATGGGTCGTCCGTCG
AGCCTTTCTGACCGACAAATTGACACAGCCTATCCCGAGGACCTGCCGCC
GAATCCCTATGACAGCACTTGTGCGCCCATGCAAGAATGCGCATTCATCC
GAGCCATGGGCGAGATCGCCAAGCTGGCGGATCGCATCTCCATCGAGATA
TATTCGCCGGCCAGCATTAAAAACCCTACGGACCTGGACAAGCTCAACCA
AATCAGCGTTGAATGCGACCACGCCCTCCAAGCTGTCACCCCGACACTAC
CAAGTTACCTGCACTTCTTCGATGACAGCGTTCCAATTGGCGAGCCCTGG
CAGGAGATCCAACGCCTGAGTCTTGGATTCTGCTACTACGTCGTCCGGAT
GCTCCTCTCCCGCCCGGCACTGGTGCTCACCACATTTTTCTCCTCGGTAC
AAGAAGCCCAGATCGCCACTGGGTGCACTGAGCTCCAATCTTGCATCAAT
TCATCGACTTCCGCAGCGCGGAATTTGATCCACCTCGCTCATGACGTCTA
TTTCCGTCGTTTCTCAGATATACGCTATGACGGAGCTCTAGCTTCGTTCC
TTCTGTCTGCGTCGCTGACTCTTTTATATGATGTGCTCAATCTAGGAACT
GATCCGGACCGAGCTAGGCAGACATTCACAGTCGTGGAAAAGGCGATAAA
GTGCCTCGATGAGATAGAGCATACGGGGTACACGTCGGGCAAGGCGTTGA
GCCTGGACCTGATGAGAGTGGCCAAGCAAGCGGTGCAAGCGGCAGATCCT
GTGGTGGACACTAATCAGGTCTTGATGGATGCGTTCCCGTGGTTAGATAA
CTGGGCATCTGCTCAGGTCGGGGAGAATCCCGATCTGTCAATGTATACAT
ATCCCCCAGCGGATGTGACAGTCATTGGCTCATTGGCGGGGAATGATGTC
GGTTGGACGGAAATGGAGGGCAACCATCTCTGGTTGGGCAATGGATTCGA
ACCGAATGCGATGCCGGGGTGTTTATTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008731-T1.utr3p1 | KJC3_008731-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.15 |
| Note | SECRETED:SignalP(1-25) |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2859786..2863797 + |
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