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KJC3_008733-T1, KJC3_008733-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008733-T1
Unique NameKJC3_008733-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2865945..2867049-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008733-T1 ID=KJC3_008733-T1|Name=KJC3_008733-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1105bp|location=Sequence derived from alignment at ch6:2865945..2867049- (Aspergillus niger KJC3)
ATGAATAAAAGCCACCCAACTAGCACGCGCCCAAAACGCATCCGCCCCAC
CCGCCGCACTAAACCCAAAACGAAGCCCGCCTCCTCAATCCGCAGCGGCC
TTATAAACCGGGCCTCACCCCGACCAACTTCATCTTCTCCTCCCCCTTCT
CATCCTCCATCGCCTCGGCGAAAGCGTCCCCTTCTTCCCTCTCTTCGCAC
CGGCTCTCCCGGGTCCAAGGACCCGGCCCTAAGTATAGAAGAATGGCTGT
CACTGCAATTACCGACATGCCTGTCGCCCGCCAGACCTTCGCGTTCATCT
GCGCAGAACGAGACCTCTCCGCCGCCGCCGTATAATAGTTCCCATTTCTA
CCAGGACCTCCCCCAATACCCAGATTCATTCTACCTTCCTCCCGAATTTC
ATAACAATCCTACTTTCGACTTCTCGTCAGCGGCCTTTCCTCCCGTTGAC
ACTACTTCCTTGTTCTATGACGACTCCCCGCCGGATACTTCTCTCACTGC
CGGGTCCAATTCAACTATAAACACAGCCTTGTCCAGTCTGAGCGATAGTA
GCTATCAAGATCAGATCATTGGCTATCCGGATCCGACTACTCAACATACT
TCTTGCGCGACGATACTTCACCCTCATCCTCACTCTCTTGTGCCTGTTAC
CACTGCTGGACCTGATCTCGACCCGATTGATTCCTTGCTTAGTTCTCCGG
AGTTGAGCGAGGAGTTGAATCTGTTGGCTTCGCCTGGTGTGAATTCTCTT
CCTGGTAGGATGCTCCCATAACCCCCTCTCTTTTGAAATACTATCATAGA
TACGGTGTGACTAACGAGGTGATGAAGAACCCTCCGAAATAGACTTCCCA
CCCATGCCAGCTGTCAGCTCAACTACATCCTCTCGAGCCGCCGCTCCTCC
GAAAGAAGCCCCGAACAGAGTCAAGAAACGGGAGCTGAATACCCTTGCTG
CGCGACGGTATCGTCAGCGACGCGTGGATCGGATGAATCAGTTGGAGGAG
GAGCTTGAGGCGATTAAGCGCGAGCGGGACGAGTTGAAGATGCGGGTTTC
CAAGTTGGAGGGGGAGACAGAGGCGTTGCGAAGTATGGTGAGGAGTCAGA
AGTAA
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Coding sequence (CDS) from alignment at ch6:2865945..2867049-

>KJC3_008733-T1 ID=KJC3_008733-T1|Name=KJC3_008733-T1|organism=Aspergillus niger KJC3|type=CDS|length=2064bp|location=Sequence derived from alignment at ch6:2865945..2867049- (Aspergillus niger KJC3)
AACCCTCCGAAATAGACTTCCCACCCATGCCAGCTGTCAGCTCAACTACA
TCCTCTCGAGCCGCCGCTCCTCCGAAAGAAGCCCCGAACAGAGTCAAGAA
ACGGGAGCTGAATACCCTTGCTGCGCGACGGTATCGTCAGCGACGCGTGG
ATCGGATGAATCAGTTGGAGGAGGAGCTTGAGGCGATTAAGCGCGAGCGG
GACGAGTTGAAGATGCGGGTTTCCAAGTTGGAGGGGGAGACAGAGGCGTT
GCGAAGTATGGTGAGGAGTCAGAAGTAAATGAATAAAAGCCACCCAACTA
GCACGCGCCCAAAACGCATCCGCCCCACCCGCCGCACTAAACCCAAAACG
AAGCCCGCCTCCTCAATCCGCAGCGGCCTTATAAACCGGGCCTCACCCCG
ACCAACTTCATCTTCTCCTCCCCCTTCTCATCCTCCATCGCCTCGGCGAA
AGCGTCCCCTTCTTCCCTCTCTTCGCACCGGCTCTCCCGGGTCCAAGGAC
CCGGCCCTAAGTATAGAAGAATGGCTGTCACTGCAATTACCGACATGCCT
GTCGCCCGCCAGACCTTCGCGTTCATCTGCGCAGAACGAGACCTCTCCGC
CGCCGCCGTATAATAGTTCCCATTTCTACCAGGACCTCCCCCAATACCCA
GATTCATTCTACCTTCCTCCCGAATTTCATAACAATCCTACTTTCGACTT
CTCGTCAGCGGCCTTTCCTCCCGTTGACACTACTTCCTTGTTCTATGACG
ACTCCCCGCCGGATACTTCTCTCACTGCCGGGTCCAATTCAACTATAAAC
ACAGCCTTGTCCAGTCTGAGCGATAGTAGCTATCAAGATCAGATCATTGG
CTATCCGGATCCGACTACTCAACATACTTCTTGCGCGACGATACTTCACC
CTCATCCTCACTCTCTTGTGCCTGTTACCACTGCTGGACCTGATCTCGAC
CCGATTGATTCCTTGCTTAGTTCTCCGGAGTTGAGCGAGGAGTTGAATCT
GTTGGCTTCGCCTGGTGTGAATTCTCTTCCTGAACCCTCCGAAATAGACT
TCCCACCCATGCCAGCTGTCAGCTCAACTACATCCTCTCGAGCCGCCGCT
CCTCCGAAAGAAGCCCCGAACAGAGTCAAGAAACGGGAGCTGAATACCCT
TGCTGCGCGACGGTATCGTCAGCGACGCGTGGATCGGATGAATCAGTTGG
AGGAGGAGCTTGAGGCGATTAAGCGCGAGCGGGACGAGTTGAAGATGCGG
GTTTCCAAGTTGGAGGGGGAGACAGAGGCGTTGCGAAGTATGGTGAGGAG
TCAGAAGTAAATGAATAAAAGCCACCCAACTAGCACGCGCCCAAAACGCA
TCCGCCCCACCCGCCGCACTAAACCCAAAACGAAGCCCGCCTCCTCAATC
CGCAGCGGCCTTATAAACCGGGCCTCACCCCGACCAACTTCATCTTCTCC
TCCCCCTTCTCATCCTCCATCGCCTCGGCGAAAGCGTCCCCTTCTTCCCT
CTCTTCGCACCGGCTCTCCCGGGTCCAAGGACCCGGCCCTAAGTATAGAA
GAATGGCTGTCACTGCAATTACCGACATGCCTGTCGCCCGCCAGACCTTC
GCGTTCATCTGCGCAGAACGAGACCTCTCCGCCGCCGCCGTATAATAGTT
CCCATTTCTACCAGGACCTCCCCCAATACCCAGATTCATTCTACCTTCCT
CCCGAATTTCATAACAATCCTACTTTCGACTTCTCGTCAGCGGCCTTTCC
TCCCGTTGACACTACTTCCTTGTTCTATGACGACTCCCCGCCGGATACTT
CTCTCACTGCCGGGTCCAATTCAACTATAAACACAGCCTTGTCCAGTCTG
AGCGATAGTAGCTATCAAGATCAGATCATTGGCTATCCGGATCCGACTAC
TCAACATACTTCTTGCGCGACGATACTTCACCCTCATCCTCACTCTCTTG
TGCCTGTTACCACTGCTGGACCTGATCTCGACCCGATTGATTCCTTGCTT
AGTTCTCCGGAGTTGAGCGAGGAGTTGAATCTGTTGGCTTCGCCTGGTGT
GAATTCTCTTCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008733KJC3_008733Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008733-T1KJC3_008733-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008733-T1.cdsKJC3_008733-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008733-T1.exon2KJC3_008733-T1.exon2Aspergillus niger KJC3exon
KJC3_008733-T1.exon1KJC3_008733-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR004827
DBxrefPFAM:PF07716
DBxrefPFAM:PF00170
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2865945..2867049 -
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