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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2869679..2872677- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008735-T1 ID=KJC3_008735-T1|Name=KJC3_008735-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2999bp|location=Sequence derived from alignment at ch6:2869679..2872677- (Aspergillus niger KJC3)
TTCTCTGTGATTCATTTGGCATTCCCCCCCTCTACTTTGTACTGTTTGAT
TACTCACCTTATCTTTACCTTTCTCTCCCCGTGCTTGGTATTTTTATCCT
CCTCCTTGGATCAAACATCCACTGGCCTCACTTCCTTGATTTCTATTTCC
CCCCTTCCCCCTCAATTGATCTGCACAAAAAAAGCAGCCCTGTTGAACCA
ACCTGCACGGTCCACTGGCTGCCCCTCCGCCTAAGCGAATCATTACTCTG
TCCGCTGGCTTGGATCTCTTGGAGTCAAATAGCGTGTGCCCGCCTCGGGG
CGCGGCCTCGTCCCATCCGCCGCGGATTCTGTGACTAACAGCAACAACCT
TCACGCTCTGGCTCCGAATATACGCTTAATTACGTCTCCAGCGCCCCTCT
TTGGCATCTTCTAGCGTCCTCTGCAGACAGGGGTGTTTTGGGTGGAATCT
GGGGAAAGAAGAAAAAAAAAAGCTTTTCCGTTTTTCCCTCTTTTCCTCTT
TCTTCCCACCGTCCCTCTTGCCTGTGTGTGCGTGTGTGTGCCTCTCCTGA
TCTTCTCGTCACCTCACCACCCTTTTCTGGGACCGGCCCTACTTTCCTAT
ATAGAGCCTTCCCAAACCATACGCCCTCCCCCTCTTCATTATGTCGGCCG
CCACCACCGTCCCGCTGTCTTTGCACAAGACATCACAGCCTAGATACTCT
CCCGCTGTCTCGGGAAACAGCTCGCCTACTGAAGGCTCCCGCAACGCCTC
CCCTCATCCCTCCACCTGCTCCTCCCAGAACTCCCGGTCCAGCAGTCGCC
GCCGGGAGTCATTTGGTTCCATCAAGGAAGACGTGGATGGTATGTATATG
TCAATCAATGCGCAGGAATGGTGTCATAGCAGGTCACTTACACGTCATAG
GCATTGCCCAGTCCTTCGTCGATACCCACATCGAACATTCCCCTCAAGAG
CCCACCAAGCGCAACCCCATTGAGATGCAGCCCGACTTTTGCTGCCCCTG
CGGTGGTTTTCTCGGCTGGAAGCAGATCCGGCTGGGTGGCAAGAGTCTGA
GTCGGAGCTACAGCGATCTCCGCAGCCTGGGGAACTTGCACGCCCGCGGT
TGGGCCTGGGATACACCCGATGTCACTCCGCCTAGCAAGCCATTGCCGGT
GGAAGAGCAGAAACTGCAGGTGCCGGAAGTGAAGGAGGTGGAAGTGGAGC
AGAAGCCGCCTGCAGGCACATCGGCTCTGGAAAGGCTTCCCCCGGAGGTT
CTTGGTAAGTGCTGGATCTTCACATGGATATCAGGCCGCTAATTGGTACA
GACCATCTTATTTCCATGTTGGCATTGGACGTGCCCCCCAATGGATATAC
CCCCCGTAACGTGGATTTGATCTCGTGCCTGCTTACCTCGAAGACATTGC
ACGCCGCCACCCTCAGTGTGTTGTACCGGAACATGACATTCCCCCACTCC
ATCATCTTTTCTAAAGCTCTCAATCATATCTCTCGCTATCCGGCTCTGGG
CACGCTGGTTCGCCGCCTTGACTTTTCGCACTTTACGTCGGTTGGACTGG
GTCGCACCAAGCAGATGAACGCTGAGATCCAGAACCTCACCTCCAAGACG
CTCCTCCAGTGTCTGGAACTGCTGCCAAACCTCAAGGAATGCTTGTTGCA
GGAACATGTCGAGGGCGATATCAGCTTGGATGTGCTTCGGAAGCTGTTCA
CCGGTCTCCCGAACCTGTCAGCCGTCGATTTCTGCGGCTGCTCCTCTCAG
TCCTTCTCCACTCTCTTCTTGGAGGCCTTGATTTCCGGTCCTGGTCTCCC
CATGACCCTGCCGAACTTGCGACGGGTTTCCCTGCATGAATGCAGCAGTC
TTCCCGCGGCTGCTTTTGAGATTCTCCTGCCGCGCCTGGTCAATCTCACT
CACCTCGATGTCACCCACACGCAGATCAGCGAGGAGGCGCTGTTCTCTAT
CCCCGAGACCGCCAAGATCACTCATCTCAGCATCTCCCGCTGCTCCCGTC
TGCGGGGCTCTCGAGTCGTCGAGTTTCTGTCCACCCACCCAGCCGTCTGC
GACTCGCTGGTGTTCCTGAACGTGCTTACCGACCCCACCCGGTCCCGGCT
CCTGGAGGAGGAGGATGTGCAGGCACTCCTTCCTCGGTTGCCTTCTACCC
TTCGTTCGCTCAACCTTGGAGGGGCCAAGGTGACTTCCGCCCATACCCAG
GCTTTGTTACCCTTGACGAAGCATCTGGAAGAGCTGGGGTTGAGCTCATG
CGAGCTCAATGGCCAGGATCTCAACACCTTCTTTGTGCCGCCCAAGCCGG
TGGAGGGAGAGCCGATCACCCCCTGGGTTCCATCCACGCTGTGCTACCTG
GATTTGAACAAGGCCAACCAGCTGACGATCGGCACCATTTTCAACCCTAA
CGCGTGCGTCATTCTCTCGCCGCAGAGCTACCCGCTGCAGGTCATCGAGT
TCAGCGACAAGCTTATCGCTCCTCTGCGCGAGCGGGCGCGCAACACGCGC
ACCTCGCCGGACTGGACGGTGCGCGAGCTGGGCCGTCGGGGATGGTACGT
GCGGGACCCGGCCTCCATGCCGGAAGTCATGCTCGACGACGGTGCGCGTT
CCTGGAAGATGGGCGCCCGTTGGTGGGGCATGCGGAAGATTCCCGTGGCC
GTGGGCGACGTAGGCGGGCTCTACGGGCACTACATGTTCAAGAAATGATC
ATGTATTTGATTTATACCCTTGCTTATCTTCTTGTTGTTTTATTACTGTG
TATGGCGCATTTGGCCGGCGTTAAATGATTTGGGCCACTGCAACGGAACG
CGCCAAAAGTGTGGTTCTGACGACATGATTGTTTTGTTCTGCATAGCGGG
AGCGAGTTTCAGCGTTGGGAGAGCTTGACGGACTGATTGGCTTGGCTTGC
TGCTGCGCTTATGATACCTTGCTGTTGGTCGGGTTATGGTTTGCGGGAAT
TACTTAGCAAATTGATAGTTATAGAATCTCATCTTACTATGAAATCTAC back to topCoding sequence (CDS) from alignment at ch6:2869679..2872677- >KJC3_008735-T1 ID=KJC3_008735-T1|Name=KJC3_008735-T1|organism=Aspergillus niger KJC3|type=CDS|length=5850bp|location=Sequence derived from alignment at ch6:2869679..2872677- (Aspergillus niger KJC3)
ACCATCTTATTTCCATGTTGGCATTGGACGTGCCCCCCAATGGATATACC
CCCCGTAACGTGGATTTGATCTCGTGCCTGCTTACCTCGAAGACATTGCA
CGCCGCCACCCTCAGTGTGTTGTACCGGAACATGACATTCCCCCACTCCA
TCATCTTTTCTAAAGCTCTCAATCATATCTCTCGCTATCCGGCTCTGGGC
ACGCTGGTTCGCCGCCTTGACTTTTCGCACTTTACGTCGGTTGGACTGGG
TCGCACCAAGCAGATGAACGCTGAGATCCAGAACCTCACCTCCAAGACGC
TCCTCCAGTGTCTGGAACTGCTGCCAAACCTCAAGGAATGCTTGTTGCAG
GAACATGTCGAGGGCGATATCAGCTTGGATGTGCTTCGGAAGCTGTTCAC
CGGTCTCCCGAACCTGTCAGCCGTCGATTTCTGCGGCTGCTCCTCTCAGT
CCTTCTCCACTCTCTTCTTGGAGGCCTTGATTTCCGGTCCTGGTCTCCCC
ATGACCCTGCCGAACTTGCGACGGGTTTCCCTGCATGAATGCAGCAGTCT
TCCCGCGGCTGCTTTTGAGATTCTCCTGCCGCGCCTGGTCAATCTCACTC
ACCTCGATGTCACCCACACGCAGATCAGCGAGGAGGCGCTGTTCTCTATC
CCCGAGACCGCCAAGATCACTCATCTCAGCATCTCCCGCTGCTCCCGTCT
GCGGGGCTCTCGAGTCGTCGAGTTTCTGTCCACCCACCCAGCCGTCTGCG
ACTCGCTGGTGTTCCTGAACGTGCTTACCGACCCCACCCGGTCCCGGCTC
CTGGAGGAGGAGGATGTGCAGGCACTCCTTCCTCGGTTGCCTTCTACCCT
TCGTTCGCTCAACCTTGGAGGGGCCAAGGTGACTTCCGCCCATACCCAGG
CTTTGTTACCCTTGACGAAGCATCTGGAAGAGCTGGGGTTGAGCTCATGC
GAGCTCAATGGCCAGGATCTCAACACCTTCTTTGTGCCGCCCAAGCCGGT
GGAGGGAGAGCCGATCACCCCCTGGGTTCCATCCACGCTGTGCTACCTGG
ATTTGAACAAGGCCAACCAGCTGACGATCGGCACCATTTTCAACCCTAAC
GCGTGCGTCATTCTCTCGCCGCAGAGCTACCCGCTGCAGGTCATCGAGTT
CAGCGACAAGCTTATCGCTCCTCTGCGCGAGCGGGCGCGCAACACGCGCA
CCTCGCCGGACTGGACGGTGCGCGAGCTGGGCCGTCGGGGATGGTACGTG
CGGGACCCGGCCTCCATGCCGGAAGTCATGCTCGACGACGGTGCGCGTTC
CTGGAAGATGGGCGCCCGTTGGTGGGGCATGCGGAAGATTCCCGTGGCCG
TGGGCGACGTAGGCGGGCTCTACGGGCACTACATGTTCAAGAAATGAGCA
TTGCCCAGTCCTTCGTCGATACCCACATCGAACATTCCCCTCAAGAGCCC
ACCAAGCGCAACCCCATTGAGATGCAGCCCGACTTTTGCTGCCCCTGCGG
TGGTTTTCTCGGCTGGAAGCAGATCCGGCTGGGTGGCAAGAGTCTGAGTC
GGAGCTACAGCGATCTCCGCAGCCTGGGGAACTTGCACGCCCGCGGTTGG
GCCTGGGATACACCCGATGTCACTCCGCCTAGCAAGCCATTGCCGGTGGA
AGAGCAGAAACTGCAGGTGCCGGAAGTGAAGGAGGTGGAAGTGGAGCAGA
AGCCGCCTGCAGGCACATCGGCTCTGGAAAGGCTTCCCCCGGAGGTTCTT
GATGTCGGCCGCCACCACCGTCCCGCTGTCTTTGCACAAGACATCACAGC
CTAGATACTCTCCCGCTGTCTCGGGAAACAGCTCGCCTACTGAAGGCTCC
CGCAACGCCTCCCCTCATCCCTCCACCTGCTCCTCCCAGAACTCCCGGTC
CAGCAGTCGCCGCCGGGAGTCATTTGGTTCCATCAAGGAAGACGTGGATG
ACCATCTTATTTCCATGTTGGCATTGGACGTGCCCCCCAATGGATATACC
CCCCGTAACGTGGATTTGATCTCGTGCCTGCTTACCTCGAAGACATTGCA
CGCCGCCACCCTCAGTGTGTTGTACCGGAACATGACATTCCCCCACTCCA
TCATCTTTTCTAAAGCTCTCAATCATATCTCTCGCTATCCGGCTCTGGGC
ACGCTGGTTCGCCGCCTTGACTTTTCGCACTTTACGTCGGTTGGACTGGG
TCGCACCAAGCAGATGAACGCTGAGATCCAGAACCTCACCTCCAAGACGC
TCCTCCAGTGTCTGGAACTGCTGCCAAACCTCAAGGAATGCTTGTTGCAG
GAACATGTCGAGGGCGATATCAGCTTGGATGTGCTTCGGAAGCTGTTCAC
CGGTCTCCCGAACCTGTCAGCCGTCGATTTCTGCGGCTGCTCCTCTCAGT
CCTTCTCCACTCTCTTCTTGGAGGCCTTGATTTCCGGTCCTGGTCTCCCC
ATGACCCTGCCGAACTTGCGACGGGTTTCCCTGCATGAATGCAGCAGTCT
TCCCGCGGCTGCTTTTGAGATTCTCCTGCCGCGCCTGGTCAATCTCACTC
ACCTCGATGTCACCCACACGCAGATCAGCGAGGAGGCGCTGTTCTCTATC
CCCGAGACCGCCAAGATCACTCATCTCAGCATCTCCCGCTGCTCCCGTCT
GCGGGGCTCTCGAGTCGTCGAGTTTCTGTCCACCCACCCAGCCGTCTGCG
ACTCGCTGGTGTTCCTGAACGTGCTTACCGACCCCACCCGGTCCCGGCTC
CTGGAGGAGGAGGATGTGCAGGCACTCCTTCCTCGGTTGCCTTCTACCCT
TCGTTCGCTCAACCTTGGAGGGGCCAAGGTGACTTCCGCCCATACCCAGG
CTTTGTTACCCTTGACGAAGCATCTGGAAGAGCTGGGGTTGAGCTCATGC
GAGCTCAATGGCCAGGATCTCAACACCTTCTTTGTGCCGCCCAAGCCGGT
GGAGGGAGAGCCGATCACCCCCTGGGTTCCATCCACGCTGTGCTACCTGG
ATTTGAACAAGGCCAACCAGCTGACGATCGGCACCATTTTCAACCCTAAC
GCGTGCGTCATTCTCTCGCCGCAGAGCTACCCGCTGCAGGTCATCGAGTT
CAGCGACAAGCTTATCGCTCCTCTGCGCGAGCGGGCGCGCAACACGCGCA
CCTCGCCGGACTGGACGGTGCGCGAGCTGGGCCGTCGGGGATGGTACGTG
CGGGACCCGGCCTCCATGCCGGAAGTCATGCTCGACGACGGTGCGCGTTC
CTGGAAGATGGGCGCCCGTTGGTGGGGCATGCGGAAGATTCCCGTGGCCG
TGGGCGACGTAGGCGGGCTCTACGGGCACTACATGTTCAAGAAATGAGCA
TTGCCCAGTCCTTCGTCGATACCCACATCGAACATTCCCCTCAAGAGCCC
ACCAAGCGCAACCCCATTGAGATGCAGCCCGACTTTTGCTGCCCCTGCGG
TGGTTTTCTCGGCTGGAAGCAGATCCGGCTGGGTGGCAAGAGTCTGAGTC
GGAGCTACAGCGATCTCCGCAGCCTGGGGAACTTGCACGCCCGCGGTTGG
GCCTGGGATACACCCGATGTCACTCCGCCTAGCAAGCCATTGCCGGTGGA
AGAGCAGAAACTGCAGGTGCCGGAAGTGAAGGAGGTGGAAGTGGAGCAGA
AGCCGCCTGCAGGCACATCGGCTCTGGAAAGGCTTCCCCCGGAGGTTCTT
GATGTCGGCCGCCACCACCGTCCCGCTGTCTTTGCACAAGACATCACAGC
CTAGATACTCTCCCGCTGTCTCGGGAAACAGCTCGCCTACTGAAGGCTCC
CGCAACGCCTCCCCTCATCCCTCCACCTGCTCCTCCCAGAACTCCCGGTC
CAGCAGTCGCCGCCGGGAGTCATTTGGTTCCATCAAGGAAGACGTGGATG
ACCATCTTATTTCCATGTTGGCATTGGACGTGCCCCCCAATGGATATACC
CCCCGTAACGTGGATTTGATCTCGTGCCTGCTTACCTCGAAGACATTGCA
CGCCGCCACCCTCAGTGTGTTGTACCGGAACATGACATTCCCCCACTCCA
TCATCTTTTCTAAAGCTCTCAATCATATCTCTCGCTATCCGGCTCTGGGC
ACGCTGGTTCGCCGCCTTGACTTTTCGCACTTTACGTCGGTTGGACTGGG
TCGCACCAAGCAGATGAACGCTGAGATCCAGAACCTCACCTCCAAGACGC
TCCTCCAGTGTCTGGAACTGCTGCCAAACCTCAAGGAATGCTTGTTGCAG
GAACATGTCGAGGGCGATATCAGCTTGGATGTGCTTCGGAAGCTGTTCAC
CGGTCTCCCGAACCTGTCAGCCGTCGATTTCTGCGGCTGCTCCTCTCAGT
CCTTCTCCACTCTCTTCTTGGAGGCCTTGATTTCCGGTCCTGGTCTCCCC
ATGACCCTGCCGAACTTGCGACGGGTTTCCCTGCATGAATGCAGCAGTCT
TCCCGCGGCTGCTTTTGAGATTCTCCTGCCGCGCCTGGTCAATCTCACTC
ACCTCGATGTCACCCACACGCAGATCAGCGAGGAGGCGCTGTTCTCTATC
CCCGAGACCGCCAAGATCACTCATCTCAGCATCTCCCGCTGCTCCCGTCT
GCGGGGCTCTCGAGTCGTCGAGTTTCTGTCCACCCACCCAGCCGTCTGCG
ACTCGCTGGTGTTCCTGAACGTGCTTACCGACCCCACCCGGTCCCGGCTC
CTGGAGGAGGAGGATGTGCAGGCACTCCTTCCTCGGTTGCCTTCTACCCT
TCGTTCGCTCAACCTTGGAGGGGCCAAGGTGACTTCCGCCCATACCCAGG
CTTTGTTACCCTTGACGAAGCATCTGGAAGAGCTGGGGTTGAGCTCATGC
GAGCTCAATGGCCAGGATCTCAACACCTTCTTTGTGCCGCCCAAGCCGGT
GGAGGGAGAGCCGATCACCCCCTGGGTTCCATCCACGCTGTGCTACCTGG
ATTTGAACAAGGCCAACCAGCTGACGATCGGCACCATTTTCAACCCTAAC
GCGTGCGTCATTCTCTCGCCGCAGAGCTACCCGCTGCAGGTCATCGAGTT
CAGCGACAAGCTTATCGCTCCTCTGCGCGAGCGGGCGCGCAACACGCGCA
CCTCGCCGGACTGGACGGTGCGCGAGCTGGGCCGTCGGGGATGGTACGTG
CGGGACCCGGCCTCCATGCCGGAAGTCATGCTCGACGACGGTGCGCGTTC
CTGGAAGATGGGCGCCCGTTGGTGGGGCATGCGGAAGATTCCCGTGGCCG
TGGGCGACGTAGGCGGGCTCTACGGGCACTACATGTTCAAGAAATGAGCA
TTGCCCAGTCCTTCGTCGATACCCACATCGAACATTCCCCTCAAGAGCCC
ACCAAGCGCAACCCCATTGAGATGCAGCCCGACTTTTGCTGCCCCTGCGG
TGGTTTTCTCGGCTGGAAGCAGATCCGGCTGGGTGGCAAGAGTCTGAGTC
GGAGCTACAGCGATCTCCGCAGCCTGGGGAACTTGCACGCCCGCGGTTGG
GCCTGGGATACACCCGATGTCACTCCGCCTAGCAAGCCATTGCCGGTGGA
AGAGCAGAAACTGCAGGTGCCGGAAGTGAAGGAGGTGGAAGTGGAGCAGA
AGCCGCCTGCAGGCACATCGGCTCTGGAAAGGCTTCCCCCGGAGGTTCTT
GATGTCGGCCGCCACCACCGTCCCGCTGTCTTTGCACAAGACATCACAGC
CTAGATACTCTCCCGCTGTCTCGGGAAACAGCTCGCCTACTGAAGGCTCC
CGCAACGCCTCCCCTCATCCCTCCACCTGCTCCTCCCAGAACTCCCGGTC
CAGCAGTCGCCGCCGGGAGTCATTTGGTTCCATCAAGGAAGACGTGGATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008735-T1.utr3p1 | KJC3_008735-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008735-T1.utr5p1 | KJC3_008735-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032675 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2869679..2872677 - |
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