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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2923230..2925633- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008755-T1 ID=KJC3_008755-T1|Name=KJC3_008755-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2404bp|location=Sequence derived from alignment at ch6:2923230..2925633- (Aspergillus niger KJC3)
AATGAAATCTCCCAATTAACCCCTTGTTAAGCGCCTCGTGTTGAACTAGC
ATTCTTCTCCTCCCTCATTTCTGAACTGTCACTGGCAGTCTCCTGTTCAT
TGCAATGCATCCTAACCACCCCGTTACAGGCACAACCCCCCAGCCCGTAC
ATCACACATCCCCTTACACATGACATGCATATCAATCCACCCCTCCAATG
AGTGTAAAATCCAGCTATGCCACTTTCATCCCACGACGTGGGGTATCCCG
CCGAATTGGCCTCCGCCGGCGTCTATTCCGGGGCCTGTTGATCTGTGTCC
TCATCTGGACCGCTCTGGATGTACTGTACATCCATCACCTCGTTTCGTCC
TCCTCTTACCGGACCAATGACATTACTCGGCCATCACTCGTCTCAGAACG
ACTGTTCATCGCCAGCACCCATTGGAACAATGAGGCTATCCTCCGCAGCC
ATTGGAACGATGCCATCATAGAACTAGCGAAAGCCTTCGGTCCAGATAAC
ATCTTCGTGAGCATCTTCGAAAGCGGAAGCTGGGATGATACCAAGGGGGC
ACTGCGAGATCTTGACGCGAACCTGGACCGACTTGGCGTGCGGCGCAACA
TCACATTGTCGAATACAACGCATGAGGATGAGATCTCCGCGTCGCCGGGT
GAGGGCTGGATCGACACGCCCCGGCATAAGAAGGAGCTAAGGCGCATATC
TTATCTTGCTCGGTTGCGCAATTGGTCCTTGCGGCCGTTGGAGGATCTGT
CGCGGCGGGGGATAACGTTTGATAAAGTGTTGTTTTTGAATGATGTGGTG
TTTACGGTGTGTTTTACTGGTTGTGTCAGTTGCAGGAAGATTAGGTTGAT
TGACAGCTCCATCTATCTAGGTCGATGATGTTATTTCGCTACTTGAGACA
AATGACGGTTCCTATGCTGCTGCTTGCTCCCTGGACTTCTCCAAACCACC
TTTATACTATGACACGTTTGCTCTTCGTGATGCGAATGGCGATGAGCATG
TGATGCAGACATGGCCTTATTTCCGCTCTGAAGTGTCGCGCAATGCTCTA
TATTCCATGTCTCCAGTACCGGTGAAGAGTTGCTGGAATGGAATGGGTCA
GTGACTTTCCCTCACATTGCTTCATACTACACCATTGATTAACAGGCCGT
CATAGTTGCTATGCCTGCGGAGCTCTTCATATCCACTACTCCATTGCGAT
TCCGTGCCATTTCCGATTCCCTTGCAAAATCACACCTCGAGGGTTCGGAG
TGTTGTTTAATTCACGCGGATAACCCTCTTTCCCAGCAGCTTGGGGTTTA
CCTGAACCCTAATGTCCGCGTTGGCTACAATCCTGCAGCTTACGAAGCTG
TTCATCCTACTGGCGCCTGGCTGTCGCTGCAGCATGTGACATTGGCTCTA
TGGGAGAATAGAATTCGACGCTGGGTTACAACGCCATTGTTCAAGAAGCT
TCTCGTTCGCAGAAGGCTTGGTCGCTGGCAGGATGTCCATCCAGATGAGA
AAGAGCCTGGCGACTTTTGTCTTATTAATGAGATGCAGGTGCTTGCCTAT
AATGGATGGGCACACGTATGATCTAAGACCTTGGGGCGGTTCTATCTCAG
GTCCTATTTGCAACCCACCACTCACTGCAGCCTTCACAGCTACCCACTAT
TCCTCTCTTATGCCCTGGGATGTCAATCCGATTGGCCTGCAGGTTGCATG
TCAGCGGACTGGATGCGCGAGGCGCTATTCCCAATCGCTGGGGAGCTTAT
AGTGACTATGACTCTTTGTACCTCAAATCGGCGATACTGGACGGTAGGAG
CAGGCAGATGGTCCACAGTCAGGTCGTGCATCTGTCTCACGGGCCTCCTG
CGTTCTGCCAGCGGCATTGCCTCTGAGGCAAGAACTTTAGGGTTCATATT
GCAAGGCGATTGATCGAGCCAGGAATCCGCTTCGTACGAGTACGAAGCGC
CATGGTGATGCTCGCATCAGCGCAACCATACAACCACATGCTATCATATC
GGAGATCGCGTTGCAGGATTGGGCAGTGGGGTCACCCAGTTTTGCTACGG
CACCAACAGTTGGCCGGTATACTATATTTGCAGTCGGTTTATTCTCATAT
ACAACCGTTTCTCCAGAAATCTAACCCGGCTACATCTCCGTTGCTATGGA
TAGTACAGGTTACGCTGACCCACAACTGAATATATATACTATCCAACCTA
AGTTATTCGTGATTCTCAATACAATCACTCAGTGCAATAACCACGATCAT
CGCTACGTCTGACTCGGGTCCTATTAACATGAATTTGCCGAGCCCAGTCA
ACTTCGATTAAGAGATAGAAAAATAATACAAACACATACAAAGCGAGCAT
GGGCTACCGCACATCCTGTAACGCAATAAATGGGGAGGGAAAAAAAGATA
CAAA back to topCoding sequence (CDS) from alignment at ch6:2923230..2925633- >KJC3_008755-T1 ID=KJC3_008755-T1|Name=KJC3_008755-T1|organism=Aspergillus niger KJC3|type=CDS|length=3753bp|location=Sequence derived from alignment at ch6:2923230..2925633- (Aspergillus niger KJC3)
TTGCTATGCCTGCGGAGCTCTTCATATCCACTACTCCATTGCGATTCCGT
GCCATTTCCGATTCCCTTGCAAAATCACACCTCGAGGGTTCGGAGTGTTG
TTTAATTCACGCGGATAACCCTCTTTCCCAGCAGCTTGGGGTTTACCTGA
ACCCTAATGTCCGCGTTGGCTACAATCCTGCAGCTTACGAAGCTGTTCAT
CCTACTGGCGCCTGGCTGTCGCTGCAGCATGTGACATTGGCTCTATGGGA
GAATAGAATTCGACGCTGGGTTACAACGCCATTGTTCAAGAAGCTTCTCG
TTCGCAGAAGGCTTGGTCGCTGGCAGGATGTCCATCCAGATGAGAAAGAG
CCTGGCGACTTTTGTCTTATTAATGAGATGCAGGTGCTTGCCTATAATGG
ATGGGCACACGTATGAGTCGATGATGTTATTTCGCTACTTGAGACAAATG
ACGGTTCCTATGCTGCTGCTTGCTCCCTGGACTTCTCCAAACCACCTTTA
TACTATGACACGTTTGCTCTTCGTGATGCGAATGGCGATGAGCATGTGAT
GCAGACATGGCCTTATTTCCGCTCTGAAGTGTCGCGCAATGCTCTATATT
CCATGTCTCCAGTACCGGTGAAGAGTTGCTGGAATGGAATGGATGAGTGT
AAAATCCAGCTATGCCACTTTCATCCCACGACGTGGGGTATCCCGCCGAA
TTGGCCTCCGCCGGCGTCTATTCCGGGGCCTGTTGATCTGTGTCCTCATC
TGGACCGCTCTGGATGTACTGTACATCCATCACCTCGTTTCGTCCTCCTC
TTACCGGACCAATGACATTACTCGGCCATCACTCGTCTCAGAACGACTGT
TCATCGCCAGCACCCATTGGAACAATGAGGCTATCCTCCGCAGCCATTGG
AACGATGCCATCATAGAACTAGCGAAAGCCTTCGGTCCAGATAACATCTT
CGTGAGCATCTTCGAAAGCGGAAGCTGGGATGATACCAAGGGGGCACTGC
GAGATCTTGACGCGAACCTGGACCGACTTGGCGTGCGGCGCAACATCACA
TTGTCGAATACAACGCATGAGGATGAGATCTCCGCGTCGCCGGGTGAGGG
CTGGATCGACACGCCCCGGCATAAGAAGGAGCTAAGGCGCATATCTTATC
TTGCTCGGTTGCGCAATTGGTCCTTGCGGCCGTTGGAGGATCTGTCGCGG
CGGGGGATAACGTTTGATAAAGTGTTGTTTTTGAATGATGTGGTGTTTAC
GTTGCTATGCCTGCGGAGCTCTTCATATCCACTACTCCATTGCGATTCCG
TGCCATTTCCGATTCCCTTGCAAAATCACACCTCGAGGGTTCGGAGTGTT
GTTTAATTCACGCGGATAACCCTCTTTCCCAGCAGCTTGGGGTTTACCTG
AACCCTAATGTCCGCGTTGGCTACAATCCTGCAGCTTACGAAGCTGTTCA
TCCTACTGGCGCCTGGCTGTCGCTGCAGCATGTGACATTGGCTCTATGGG
AGAATAGAATTCGACGCTGGGTTACAACGCCATTGTTCAAGAAGCTTCTC
GTTCGCAGAAGGCTTGGTCGCTGGCAGGATGTCCATCCAGATGAGAAAGA
GCCTGGCGACTTTTGTCTTATTAATGAGATGCAGGTGCTTGCCTATAATG
GATGGGCACACGTATGAGTCGATGATGTTATTTCGCTACTTGAGACAAAT
GACGGTTCCTATGCTGCTGCTTGCTCCCTGGACTTCTCCAAACCACCTTT
ATACTATGACACGTTTGCTCTTCGTGATGCGAATGGCGATGAGCATGTGA
TGCAGACATGGCCTTATTTCCGCTCTGAAGTGTCGCGCAATGCTCTATAT
TCCATGTCTCCAGTACCGGTGAAGAGTTGCTGGAATGGAATGGATGAGTG
TAAAATCCAGCTATGCCACTTTCATCCCACGACGTGGGGTATCCCGCCGA
ATTGGCCTCCGCCGGCGTCTATTCCGGGGCCTGTTGATCTGTGTCCTCAT
CTGGACCGCTCTGGATGTACTGTACATCCATCACCTCGTTTCGTCCTCCT
CTTACCGGACCAATGACATTACTCGGCCATCACTCGTCTCAGAACGACTG
TTCATCGCCAGCACCCATTGGAACAATGAGGCTATCCTCCGCAGCCATTG
GAACGATGCCATCATAGAACTAGCGAAAGCCTTCGGTCCAGATAACATCT
TCGTGAGCATCTTCGAAAGCGGAAGCTGGGATGATACCAAGGGGGCACTG
CGAGATCTTGACGCGAACCTGGACCGACTTGGCGTGCGGCGCAACATCAC
ATTGTCGAATACAACGCATGAGGATGAGATCTCCGCGTCGCCGGGTGAGG
GCTGGATCGACACGCCCCGGCATAAGAAGGAGCTAAGGCGCATATCTTAT
CTTGCTCGGTTGCGCAATTGGTCCTTGCGGCCGTTGGAGGATCTGTCGCG
GCGGGGGATAACGTTTGATAAAGTGTTGTTTTTGAATGATGTGGTGTTTA
CGTTGCTATGCCTGCGGAGCTCTTCATATCCACTACTCCATTGCGATTCC
GTGCCATTTCCGATTCCCTTGCAAAATCACACCTCGAGGGTTCGGAGTGT
TGTTTAATTCACGCGGATAACCCTCTTTCCCAGCAGCTTGGGGTTTACCT
GAACCCTAATGTCCGCGTTGGCTACAATCCTGCAGCTTACGAAGCTGTTC
ATCCTACTGGCGCCTGGCTGTCGCTGCAGCATGTGACATTGGCTCTATGG
GAGAATAGAATTCGACGCTGGGTTACAACGCCATTGTTCAAGAAGCTTCT
CGTTCGCAGAAGGCTTGGTCGCTGGCAGGATGTCCATCCAGATGAGAAAG
AGCCTGGCGACTTTTGTCTTATTAATGAGATGCAGGTGCTTGCCTATAAT
GGATGGGCACACGTATGAGTCGATGATGTTATTTCGCTACTTGAGACAAA
TGACGGTTCCTATGCTGCTGCTTGCTCCCTGGACTTCTCCAAACCACCTT
TATACTATGACACGTTTGCTCTTCGTGATGCGAATGGCGATGAGCATGTG
ATGCAGACATGGCCTTATTTCCGCTCTGAAGTGTCGCGCAATGCTCTATA
TTCCATGTCTCCAGTACCGGTGAAGAGTTGCTGGAATGGAATGGATGAGT
GTAAAATCCAGCTATGCCACTTTCATCCCACGACGTGGGGTATCCCGCCG
AATTGGCCTCCGCCGGCGTCTATTCCGGGGCCTGTTGATCTGTGTCCTCA
TCTGGACCGCTCTGGATGTACTGTACATCCATCACCTCGTTTCGTCCTCC
TCTTACCGGACCAATGACATTACTCGGCCATCACTCGTCTCAGAACGACT
GTTCATCGCCAGCACCCATTGGAACAATGAGGCTATCCTCCGCAGCCATT
GGAACGATGCCATCATAGAACTAGCGAAAGCCTTCGGTCCAGATAACATC
TTCGTGAGCATCTTCGAAAGCGGAAGCTGGGATGATACCAAGGGGGCACT
GCGAGATCTTGACGCGAACCTGGACCGACTTGGCGTGCGGCGCAACATCA
CATTGTCGAATACAACGCATGAGGATGAGATCTCCGCGTCGCCGGGTGAG
GGCTGGATCGACACGCCCCGGCATAAGAAGGAGCTAAGGCGCATATCTTA
TCTTGCTCGGTTGCGCAATTGGTCCTTGCGGCCGTTGGAGGATCTGTCGC
GGCGGGGGATAACGTTTGATAAAGTGTTGTTTTTGAATGATGTGGTGTTT
ACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008755-T1.utr3p1 | KJC3_008755-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008755-T1.utr5p1 | KJC3_008755-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT69 |
| DBxref | InterPro:IPR021047 |
| DBxref | PFAM:PF11735 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2923230..2925633 - |
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