You are here

Home

KJC3_008762-T1, KJC3_008762-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008762-T1
Unique NameKJC3_008762-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2940707..2942516-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008762-T1 ID=KJC3_008762-T1|Name=KJC3_008762-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1810bp|location=Sequence derived from alignment at ch6:2940707..2942516- (Aspergillus niger KJC3)
CCTCCCATCTCCTCCGCTTCTTCCTCCATTCCTCCCCCCATGTCTGATGA
CAGTCCGGGAGAAAGGCGCGGCTTCCGGGCCTTCTTCGCCAATGCTCTCC
GGCCCAAGAAATCCCGGCAAGTCTTGCGCAAGGGCTACAGCGCATCCACT
CCAGACCTCCGAGCCGGCTTCAAGCGGCCCAGCACTACCAGCGAAGATGT
CCCTCCGCTGCCCTCCCTGGCGCCATTGGAGGCACATCGCCTCAAATACC
GAGGACTCAACGCCAACAAAGACACCCAGCTCGGTGAAAGCCGCGATCAC
ACCGAACTCCTGCACGCCATCGGCGTTCAGGATCTCGATCCCTCAGACCC
TTACGCCAACCGCGCCGAGTTCGACAACCGTCCTCCTGGCGAGCCGGTAA
TCGCCAGTCTCCCCCCCATCCTCTGGGAGGAGATCTGCTCCTATCTCACG
CCCGCAGACCAAGCCAGTCTCGCCTTCGCCAGCAAAACCCTCCGCTCCAA
GCTCGCCCCGCTCCAACCCTGGCAAGCCCTCAACCACCCTTCCAACCGCG
AATACCGCTCCGACTTCCTCGTCTCCCAAGATTGCTACCTCCCCCATCAT
CTCCTCTGCTTTCCATGCGCCCGCTACCACCGTCGCACCCAAGAGGGCCA
TGAGAAACTTCAACCCGCCCATGTCATCAATCCTCTCTTCAACTGCCCGA
ACATGCGCAACACTCTCCTCCCGCCCCCTCGTCACCGCATCACCCACGGC
CGCACCCTCCCCTTCAGCTTCGTCCAACTCGTCATGCGCGCCCACAAATT
CTCCCCTTCTTACGGCCTCGCCCCGGAATCCCTCTCCCGCCGCTGGCGCC
GCGATGACTGGTCCCACCACACCCGCTTCCACATCCACAAAGGCCACCTG
CTAATGCGGGTCATCAGCACCCGCTTCGCAGACCCAGACCTTCCTCCCAG
CTCACAACGTCTCCTCCTCTACTCCCGCGAAGACTACTGGCCATACTTCT
CCGCGTGCGCGCACTGGCGCGACGGCGAACTCATGAACGTGTGCAAATGT
GCCCTCACTCATGTCCCCGCACCCCGCGACACCTCTGCCCTACAGGGCCT
CGAACACCGCGCTAAGGATATCATGGCGCGGCGCATCCACAACCCTAACT
CAATTGCCACCCTATGCGGGAAATGTCGTCCCATGCGCCGCTGTCCGGAG
TGTCCGTCTGAATATCTCGTCGAGATCAAGTTGACCGAGGATCGCGCGGA
CCCACGCGCGCTGCACTTCCGACATGCGATTGTGGTTACGCGGTGGTGTG
ATCTGGGCGATGGGACGTCGCCGCGGCTGTCGAGGGAATGGGCAGCGTGT
AATGGGTTGCTGGAGGGGTATGATTCGTTCCAGATGCTAGGGAAGCGGTC
TATTTCGGGGATTTTCGAATCTTCGATTACGGATGATACGTTACCTGGGC
AGAGGATTATATCCATGAATCCGAAAGGGAAGAAAAGGGGAGAGGATGGA
ACGGGGTGGTATTGATTTTTTCCCCTCCTCAAAATTTTGGAGTTTTGGGT
ATCTTGTATGGGAGTTTTTTTCATATGGTTAGGTTTGCGGATTGCATTGG
GTATGGCGGATAACGTACTACTTTTACTACTCACATGGCATTATATAGAT
TGACACACTAAAGCAGGCTAGGGTAGGCTGGAATAGGCAGGACAGGACAG
GGCAGGCGTGTATGGAGTATTTTACTATCTTGTTGCATTATTATAAAACG
GTGTCTTTCTTTTACTGACTATTAAGTAGTTGGGAATCATACATCAATCT
ATCTAGATCT
back to top

Coding sequence (CDS) from alignment at ch6:2940707..2942516-

>KJC3_008762-T1 ID=KJC3_008762-T1|Name=KJC3_008762-T1|organism=Aspergillus niger KJC3|type=CDS|length=1476bp|location=Sequence derived from alignment at ch6:2940707..2942516- (Aspergillus niger KJC3)
ATGTCTGATGACAGTCCGGGAGAAAGGCGCGGCTTCCGGGCCTTCTTCGC
CAATGCTCTCCGGCCCAAGAAATCCCGGCAAGTCTTGCGCAAGGGCTACA
GCGCATCCACTCCAGACCTCCGAGCCGGCTTCAAGCGGCCCAGCACTACC
AGCGAAGATGTCCCTCCGCTGCCCTCCCTGGCGCCATTGGAGGCACATCG
CCTCAAATACCGAGGACTCAACGCCAACAAAGACACCCAGCTCGGTGAAA
GCCGCGATCACACCGAACTCCTGCACGCCATCGGCGTTCAGGATCTCGAT
CCCTCAGACCCTTACGCCAACCGCGCCGAGTTCGACAACCGTCCTCCTGG
CGAGCCGGTAATCGCCAGTCTCCCCCCCATCCTCTGGGAGGAGATCTGCT
CCTATCTCACGCCCGCAGACCAAGCCAGTCTCGCCTTCGCCAGCAAAACC
CTCCGCTCCAAGCTCGCCCCGCTCCAACCCTGGCAAGCCCTCAACCACCC
TTCCAACCGCGAATACCGCTCCGACTTCCTCGTCTCCCAAGATTGCTACC
TCCCCCATCATCTCCTCTGCTTTCCATGCGCCCGCTACCACCGTCGCACC
CAAGAGGGCCATGAGAAACTTCAACCCGCCCATGTCATCAATCCTCTCTT
CAACTGCCCGAACATGCGCAACACTCTCCTCCCGCCCCCTCGTCACCGCA
TCACCCACGGCCGCACCCTCCCCTTCAGCTTCGTCCAACTCGTCATGCGC
GCCCACAAATTCTCCCCTTCTTACGGCCTCGCCCCGGAATCCCTCTCCCG
CCGCTGGCGCCGCGATGACTGGTCCCACCACACCCGCTTCCACATCCACA
AAGGCCACCTGCTAATGCGGGTCATCAGCACCCGCTTCGCAGACCCAGAC
CTTCCTCCCAGCTCACAACGTCTCCTCCTCTACTCCCGCGAAGACTACTG
GCCATACTTCTCCGCGTGCGCGCACTGGCGCGACGGCGAACTCATGAACG
TGTGCAAATGTGCCCTCACTCATGTCCCCGCACCCCGCGACACCTCTGCC
CTACAGGGCCTCGAACACCGCGCTAAGGATATCATGGCGCGGCGCATCCA
CAACCCTAACTCAATTGCCACCCTATGCGGGAAATGTCGTCCCATGCGCC
GCTGTCCGGAGTGTCCGTCTGAATATCTCGTCGAGATCAAGTTGACCGAG
GATCGCGCGGACCCACGCGCGCTGCACTTCCGACATGCGATTGTGGTTAC
GCGGTGGTGTGATCTGGGCGATGGGACGTCGCCGCGGCTGTCGAGGGAAT
GGGCAGCGTGTAATGGGTTGCTGGAGGGGTATGATTCGTTCCAGATGCTA
GGGAAGCGGTCTATTTCGGGGATTTTCGAATCTTCGATTACGGATGATAC
GTTACCTGGGCAGAGGATTATATCCATGAATCCGAAAGGGAAGAAAAGGG
GAGAGGATGGAACGGGGTGGTATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008762KJC3_008762Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008762-T1.cdsKJC3_008762-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008762-T1.utr3p1KJC3_008762-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008762-T1.exon1KJC3_008762-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008762-T1.utr5p1KJC3_008762-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008762-T1KJC3_008762-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036047
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2940707..2942516 -
Powered by Drupal