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KJC3_008764-T1, KJC3_008764-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008764-T1
Unique NameKJC3_008764-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2943876..2946525+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008764-T1 ID=KJC3_008764-T1|Name=KJC3_008764-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2650bp|location=Sequence derived from alignment at ch6:2943876..2946525+ (Aspergillus niger KJC3)
CCGCGCCGAAGTTTCCCGGCATTTGGATCCACCATCTTTTAGCTTCAACC
ATTCATACTCAATCAGGATCTCCGTCATGCTGCCGGGCTTTCTCTCTACT
TCCTCGCCGTGAATCTCGATTCCTTCCTTTGTGTCGCCTTTTGTCCTCAA
GCCCGGCCATGGAGTCCCCCTCGTCCTCGCCATACGCCGGCCAGAAACGC
AAAATCGCCGACATGAGCTCCGATGAAGAGGAAGAAGAAGATTACCGCCC
AACCATGGGCTTTCGCGGTTTTGCTCGCGCGTCGTCTCGCTCTGAGTCGC
CTCCTTCTCACGGCGGGCTAGGAAGCTCTCGTCGCAATCCTCGGAACAAC
ACCGCGCAGTCAGCGATGAAAGGCGGAGGCAACAATGCTGGCAAAGGAAT
GTCCGGAGGCAACTCCTTCGCCGCGCGCATGATGGCCAAGATGGGTTACG
TCGAGGGACAGGGTTTGGGTTCTTCCGGTCAAGGTATCGTCAACCCGATC
GAGGCCCAGGCTCGTCCTACAGGTGCCGGTCTGGGTGCGGTCCGTGAGAA
GACAAAGCAAGCGCGAGAAGAGGAAAAGCGGGCAGCAGCTCTCCGGGGCG
AGTCCGTCGAGGATAGCTCAGATGAAGAGCGCAAGAGGCGACGGAAAAAG
AAGGAGGAGCGTAAACGAGAGGGCCGGAGCGGGACCGGGACACCAGTGGC
TCGCGCGAAGCCCCAGTTCCGAACTGCGCGCGAGATGGAAAAGGATATGG
AGGGCTTGGAAGTTCCGAACGTGCTAAAGTCGCTTATCGATGCGACCGGG
AAGGACCAGAAGGTGCTCACGTCTACAGCTGGTCTGATGACGCCGCAAAC
ATTCGTTACTCAAGGCGAGGGAGAAGCCTGGAAAATCGCGCAACGTGCTC
GGAACGACCTAGAGGCGTTTGCAGACGAGTGGAAGGGTCTGACAGAGCGG
AAAAAATACATCGAGCTAGAGGAAGCCCAGGTCGTGGAACAACTTGATAC
AAATCAGCTCAAGGTCGACCAGCTGTCTGAGCTCGTCACAGCCATCGGGC
AACTAGAGATCTTCCAGAAGGAAGACACTCGAGCAAAGTTCGACGAAATC
ACCGATAAGCTGGAGTCCATGGAGATCAAGTACCGCAGCGAGATTGATGA
ATACCGACTGCCAGAAACGGCCGTCGCAGCCATCCATCCTCTTTTCCGCC
AAGCGATGGAAGAATGGGAGCCTCTCAGGGACCCGACGTTCCTCGTATCC
AACCTCCGTCGTCTCCAGCCCCTACTCCTTCGAAAGGCCAACAACGAGCA
CACCCAGCGACAATCCACCTCCCCCTATGAGACCATGATCTACACCTTAT
GGCTGCCCCGCGTGCGCTCCGCCCTCCTCAACGACTGGGACGTATACGAG
CCCGCCCCAGCAACCTCCCTTATAGTCGCCTGGAAAGAGCTCCTCCCCCC
CTTCGTCTACACCAACGTCCTCGACCAACTCGTCGTACCGAAGCTCTCTA
ACGGCCTGAAAGAATGGAAACCCCGAAGCAGCAGCCGCCGTCACCACAAC
TCATCCTCCAACAGCTCCCGCTTCCCCTGGTGGCTCTTCACTTGGCTCCA
ATACCTCGACGAGCGGCACACCAACCCCAAGCAACCCACGGGCCTACTCT
CCGACGCGAAGCGCAAATTCCGCGTCGTCCTCGACAGCTGGGACCTCAAC
AAGGGGCTGATCAACGGCATCGAACTCTGGCGCGACGCCCTAGGCTCCGA
ATTCGACATCTGTCTCCGCAACCACCTCCTCCCCCGCCTAGGCCGCCACC
TCCGCGAAGACTTCGAAGTCAACCCGCAAGACCAAGACCTCACGGCCCTC
GAAAACGTCCTGAAATGGAAAGACTTCTTCAAACTCAACGTCATGGGTCT
TCTCCTCGTCGCCGAATTCTTCCCGAAATGGCACAACATCCTCTACATCT
GGCTCACCAACGACCCCAACTACGAAGAAGTCGCCGAATGGTTCACCTGG
TGGCGCACCCAAATCCCCACCGATATCAACGACCTCACTATCGTCGATGA
TGAATGGAACAAGGGTCTCCAAACTATGGACTTCGCCTCCCAACTCGGCG
ACCGTGCCGCTGCTGAACTTCCTCCTCCTTCATCTACCACCGAACACCCC
TCAACAACCAAACCCACCGCCACGACAACAGCGGCAGAACAAGAAAAACA
ACAACAACAACAATCCCGCAAACCCAAAATCATCGAAGAAGTCGCCTTCA
AAGATATTCTTGAATCCTGGTGCATGGAACAAGGCCTCATCATGCTGCCG
TTGCGTGAAGCGCATCCGCAAAACGGTCAGCCTTTGTTCCGCATTACGGC
TAGCGCGACGGGTAAGGGAGGTGTTGTGGCGTTCGTGCAGGGTGATGTGG
TCTGGGTGCAGAATAAGAAGGCTAAGGAGATGTGGGAGCCTATGGGGTTG
GAGGATCAGTTGGTGGAGAGAGCGGAGGGGAGGTAGATAGATACTTGCCC
TTAACACTGATTATATACATTATTTTCTACTATGCTGGGTTATGGTTTGG
ATCAGAGGTGTCTTTTACTTCTTGCTATTGTTTTTGTGGGTTAGTTGTGA
TACCATACCATACATACATATCACTATGGATCTTATGCTTCATGTTGGGG
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Coding sequence (CDS) from alignment at ch6:2943876..2946525+

>KJC3_008764-T1 ID=KJC3_008764-T1|Name=KJC3_008764-T1|organism=Aspergillus niger KJC3|type=CDS|length=2328bp|location=Sequence derived from alignment at ch6:2943876..2946525+ (Aspergillus niger KJC3)
ATGGAGTCCCCCTCGTCCTCGCCATACGCCGGCCAGAAACGCAAAATCGC
CGACATGAGCTCCGATGAAGAGGAAGAAGAAGATTACCGCCCAACCATGG
GCTTTCGCGGTTTTGCTCGCGCGTCGTCTCGCTCTGAGTCGCCTCCTTCT
CACGGCGGGCTAGGAAGCTCTCGTCGCAATCCTCGGAACAACACCGCGCA
GTCAGCGATGAAAGGCGGAGGCAACAATGCTGGCAAAGGAATGTCCGGAG
GCAACTCCTTCGCCGCGCGCATGATGGCCAAGATGGGTTACGTCGAGGGA
CAGGGTTTGGGTTCTTCCGGTCAAGGTATCGTCAACCCGATCGAGGCCCA
GGCTCGTCCTACAGGTGCCGGTCTGGGTGCGGTCCGTGAGAAGACAAAGC
AAGCGCGAGAAGAGGAAAAGCGGGCAGCAGCTCTCCGGGGCGAGTCCGTC
GAGGATAGCTCAGATGAAGAGCGCAAGAGGCGACGGAAAAAGAAGGAGGA
GCGTAAACGAGAGGGCCGGAGCGGGACCGGGACACCAGTGGCTCGCGCGA
AGCCCCAGTTCCGAACTGCGCGCGAGATGGAAAAGGATATGGAGGGCTTG
GAAGTTCCGAACGTGCTAAAGTCGCTTATCGATGCGACCGGGAAGGACCA
GAAGGTGCTCACGTCTACAGCTGGTCTGATGACGCCGCAAACATTCGTTA
CTCAAGGCGAGGGAGAAGCCTGGAAAATCGCGCAACGTGCTCGGAACGAC
CTAGAGGCGTTTGCAGACGAGTGGAAGGGTCTGACAGAGCGGAAAAAATA
CATCGAGCTAGAGGAAGCCCAGGTCGTGGAACAACTTGATACAAATCAGC
TCAAGGTCGACCAGCTGTCTGAGCTCGTCACAGCCATCGGGCAACTAGAG
ATCTTCCAGAAGGAAGACACTCGAGCAAAGTTCGACGAAATCACCGATAA
GCTGGAGTCCATGGAGATCAAGTACCGCAGCGAGATTGATGAATACCGAC
TGCCAGAAACGGCCGTCGCAGCCATCCATCCTCTTTTCCGCCAAGCGATG
GAAGAATGGGAGCCTCTCAGGGACCCGACGTTCCTCGTATCCAACCTCCG
TCGTCTCCAGCCCCTACTCCTTCGAAAGGCCAACAACGAGCACACCCAGC
GACAATCCACCTCCCCCTATGAGACCATGATCTACACCTTATGGCTGCCC
CGCGTGCGCTCCGCCCTCCTCAACGACTGGGACGTATACGAGCCCGCCCC
AGCAACCTCCCTTATAGTCGCCTGGAAAGAGCTCCTCCCCCCCTTCGTCT
ACACCAACGTCCTCGACCAACTCGTCGTACCGAAGCTCTCTAACGGCCTG
AAAGAATGGAAACCCCGAAGCAGCAGCCGCCGTCACCACAACTCATCCTC
CAACAGCTCCCGCTTCCCCTGGTGGCTCTTCACTTGGCTCCAATACCTCG
ACGAGCGGCACACCAACCCCAAGCAACCCACGGGCCTACTCTCCGACGCG
AAGCGCAAATTCCGCGTCGTCCTCGACAGCTGGGACCTCAACAAGGGGCT
GATCAACGGCATCGAACTCTGGCGCGACGCCCTAGGCTCCGAATTCGACA
TCTGTCTCCGCAACCACCTCCTCCCCCGCCTAGGCCGCCACCTCCGCGAA
GACTTCGAAGTCAACCCGCAAGACCAAGACCTCACGGCCCTCGAAAACGT
CCTGAAATGGAAAGACTTCTTCAAACTCAACGTCATGGGTCTTCTCCTCG
TCGCCGAATTCTTCCCGAAATGGCACAACATCCTCTACATCTGGCTCACC
AACGACCCCAACTACGAAGAAGTCGCCGAATGGTTCACCTGGTGGCGCAC
CCAAATCCCCACCGATATCAACGACCTCACTATCGTCGATGATGAATGGA
ACAAGGGTCTCCAAACTATGGACTTCGCCTCCCAACTCGGCGACCGTGCC
GCTGCTGAACTTCCTCCTCCTTCATCTACCACCGAACACCCCTCAACAAC
CAAACCCACCGCCACGACAACAGCGGCAGAACAAGAAAAACAACAACAAC
AACAATCCCGCAAACCCAAAATCATCGAAGAAGTCGCCTTCAAAGATATT
CTTGAATCCTGGTGCATGGAACAAGGCCTCATCATGCTGCCGTTGCGTGA
AGCGCATCCGCAAAACGGTCAGCCTTTGTTCCGCATTACGGCTAGCGCGA
CGGGTAAGGGAGGTGTTGTGGCGTTCGTGCAGGGTGATGTGGTCTGGGTG
CAGAATAAGAAGGCTAAGGAGATGTGGGAGCCTATGGGGTTGGAGGATCA
GTTGGTGGAGAGAGCGGAGGGGAGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008764KJC3_008764Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008764-T1.utr5p1KJC3_008764-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008764-T1.exon1KJC3_008764-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008764-T1.cdsKJC3_008764-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008764-T1.utr3p1KJC3_008764-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008764-T1KJC3_008764-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR022783
DBxrefInterPro:IPR000467
DBxrefPFAM:PF07842
DBxrefPFAM:PF12656
DBxrefPFAM:PF01585
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2943876..2946525 +
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