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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2971682..2973874+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008769-T1 ID=KJC3_008769-T1|Name=KJC3_008769-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2193bp|location=Sequence derived from alignment at ch6:2971682..2973874+ (Aspergillus niger KJC3)
TGGCCATATATCTGGTTTCTGGTATATCTGCGTCATGACTTCTTCAATTG
TACTCGTGCCATGACGATCATGGCCGCGCACGATCCTCAATCCAATTTCT
GGATCGTATACGCAGTACCATACAACATGAGTCGTTGCCTGTCTACAACC
CGTGGTTCAGATCGGATACCGATGACTAGAACATCATCATAGAGTCAATC
TCAAAGGCGTCGCTTCTTTGTCACAAACTATATAACTGGACACGCACTGC
AGGCGCGTTCACAACGCATCTGCAGACTAGATACTTTAATGCACCTTCCT
CTCTTGGCGTCTCTGGATCAATCTCTATCTTTGATCTCCCCGAGCTAGAC
GGATCTCCGCAACGGGTTCGACATTGGTTTCTGGAGTGAGCAGCAAACGG
TTTTCCAACTAATATGCCCTGTGGCATGAACCCCGCTATACGACATTGAT
GATGTCCAAAAGGGTCATCTTCCTCATGGGTGCGCCCACGTCGCGGAATC
TTCAGTGGAATGAAGAGGAGCTGCTGGACACACCGATATCTCCATTTCAT
AGTCTGGATACGCAAGATGAAGGCCATTGGCCTTTCCCCGATACTCAGCC
CGTGAAATGGAGACTATTGCGGGATCTACGCAGTCCAGGGCTTCTCCCAG
AAATCTACAGATGGGAACCAAGTCGAGATGCTCGCTTCCTCGCTATACGT
GACATTGCAGTCTCTGAAGATATATCACGGACAAAGCCGGACGATTCAGT
GCTATCGCAGTTCTACAACCATTCCTTTACCGTTCATGAAACCTCGGAGA
TCTCGACCCCGGGGTTTCACTCTGGAGATACCATGCGAAGTAGCAGTTTA
TCGGCTGGGACCTCTTTTGCGACAAGCAGCGAGAGGGACGGGCCAACACC
AGGGTTACCAATCCAGGGGCCCCTCACCGATCTCCGGGATATCCCCACTG
CGACATATCTGAATTCGATCGTGCCACAGACGATGACGGTGAATCTGATT
GTGGCGATTATCGCCATCCACCCTCCCAGGCGGGTGGTAACGCGGCAATG
GAAGCAAGAATTGGATCTGGTTGAGGTGGTGGTTGGGGATGATACAAGAA
GTGGGTTTGGGGTTACGTTCTGGCTTCCTCCCGTGAATCATGCGGTCATG
GCTGGGGAAGGTGACGACGAAGGAGATGCGCTGGGAGTGTCGTTGGCAAC
GCTGCGTCCACGGGACATTGTTCTGATGCGGATGGTAGGACTGAGCTCCT
TCCGGGAACGGGTATACGGGCAGAGTTTGAGGAAAGGGGTCACGAAGGTT
AACCTGCTGCACCGCCAGCGGGTCGACGTAACCGAAGCAGGCGGGCTCTA
CAGTGCGAAGCAACTCCGGGATATTCATCAGGACCCTGCAGCCAAGCGTG
AGGAAGATCTACTACCGCTGATGAAGGTGAGCAAGGTGCGCGAGTGGATC
AGGAGATTTGTATTAAATCCGGTAGGCGGTGAAGGGGGCCGGGGGCCTTT
TACACGTGGCTTGGCTGGGAAGGGCCATTCACTGCCCCCAGACACGCAGG
AGTGAGCAGGCAAAGCGTGATTTATATATAGATAATGGCCTGAAGTAAGG
TCTGCTGCCTACTGTCTATATACTTATACTGGCTGGGAACTCTGTTTGCT
TCCCTAATCCTTAATCTCTTGATTCATTAATTTCCTTGTTTATCCTGCAG
TTCTAAGGCGCTCATGTAACCTGCCACCATCCTTTATGAACCCGTGACCA
CCACACTGGGGGACGTTAGGAAATGGCGGCAACAAAGAAAACAGGGTGAT
CAGGAGACACGGAATGGAATTGATGCTTATTCCTCCTGCATCCATTCTGG
GTAACCCACTAAGGTAGGTACTACGTTGTGCTAAATTGAAGAGGGAATGC
AACCCGATAGTTTAAACGCCATCGGTGACCAAGTACCAAGTATGAGGCCA
CCCTTTCATTGGATATTATGATGGCGACTGGGGAGTAGTAAGTACATAGT
AGTTTCCGAATGGGTTACTAGTATTTCTGCTATTCCTTCTTTTCTTGCCA
TTTCCCACCAACGATCAATTTGGGGGGGGAGGCATATGCACGTACTGCGT
CAATCGTGCATCAGCTGTAATGTAAGTCTACTTCTCCTCCTCCTCATCAT
CTTCATCATCATGATTGTGATATATGCGAGATTTCGTAACCCA back to topCoding sequence (CDS) from alignment at ch6:2971682..2973874+ >KJC3_008769-T1 ID=KJC3_008769-T1|Name=KJC3_008769-T1|organism=Aspergillus niger KJC3|type=CDS|length=1107bp|location=Sequence derived from alignment at ch6:2971682..2973874+ (Aspergillus niger KJC3)
ATGATGTCCAAAAGGGTCATCTTCCTCATGGGTGCGCCCACGTCGCGGAA
TCTTCAGTGGAATGAAGAGGAGCTGCTGGACACACCGATATCTCCATTTC
ATAGTCTGGATACGCAAGATGAAGGCCATTGGCCTTTCCCCGATACTCAG
CCCGTGAAATGGAGACTATTGCGGGATCTACGCAGTCCAGGGCTTCTCCC
AGAAATCTACAGATGGGAACCAAGTCGAGATGCTCGCTTCCTCGCTATAC
GTGACATTGCAGTCTCTGAAGATATATCACGGACAAAGCCGGACGATTCA
GTGCTATCGCAGTTCTACAACCATTCCTTTACCGTTCATGAAACCTCGGA
GATCTCGACCCCGGGGTTTCACTCTGGAGATACCATGCGAAGTAGCAGTT
TATCGGCTGGGACCTCTTTTGCGACAAGCAGCGAGAGGGACGGGCCAACA
CCAGGGTTACCAATCCAGGGGCCCCTCACCGATCTCCGGGATATCCCCAC
TGCGACATATCTGAATTCGATCGTGCCACAGACGATGACGGTGAATCTGA
TTGTGGCGATTATCGCCATCCACCCTCCCAGGCGGGTGGTAACGCGGCAA
TGGAAGCAAGAATTGGATCTGGTTGAGGTGGTGGTTGGGGATGATACAAG
AAGTGGGTTTGGGGTTACGTTCTGGCTTCCTCCCGTGAATCATGCGGTCA
TGGCTGGGGAAGGTGACGACGAAGGAGATGCGCTGGGAGTGTCGTTGGCA
ACGCTGCGTCCACGGGACATTGTTCTGATGCGGATGGTAGGACTGAGCTC
CTTCCGGGAACGGGTATACGGGCAGAGTTTGAGGAAAGGGGTCACGAAGG
TTAACCTGCTGCACCGCCAGCGGGTCGACGTAACCGAAGCAGGCGGGCTC
TACAGTGCGAAGCAACTCCGGGATATTCATCAGGACCCTGCAGCCAAGCG
TGAGGAAGATCTACTACCGCTGATGAAGGTGAGCAAGGTGCGCGAGTGGA
TCAGGAGATTTGTATTAAATCCGGTAGGCGGTGAAGGGGGCCGGGGGCCT
TTTACACGTGGCTTGGCTGGGAAGGGCCATTCACTGCCCCCAGACACGCA
GGAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008769-T1.utr5p1 | KJC3_008769-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008769-T1.utr3p1 | KJC3_008769-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2971682..2973874 + |
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