|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2976692..2978164- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008771-T1 ID=KJC3_008771-T1|Name=KJC3_008771-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1473bp|location=Sequence derived from alignment at ch6:2976692..2978164- (Aspergillus niger KJC3)
CCAATTAATCCCCAGCTGTCCAGCACCAGCTTCACCTGCAATCCGCAGCA
ATTCCCCTCCAACTCACCAAGAGTAGGCTCTCAAAATGGCCGAACTCGCA
CAAGATGATCTACAGAATCAATTCTACGTACTAGTAACCGGCGCAAACAG
GTACCCATCCCTCCATACCACCTCACCACCACGCCCCCCTCGCAGCACAC
CAAACAATCTAACAAATACACCAGCGGCCTCGGCCTCGCCATCTGCGCCC
GTCTAATAACGGACTTCCTCACCACGCACCCATCAACCCACCACCTAACC
ATAATCTTCACGACCCGGAGCCCCAAAAAAGCCTCCTCGACCCTCCACCA
CCTCCAAACCCTCCTCCCACCTATATCCTCCCCCACTCAATCCTCCAGAA
TAACCCTCCACCCCGAAACCGTCGACCTCTCCTCCCTCCCCTCCGTCCGC
GCCCTCTCCCAGCGACTCACAACCACCATCCCTAAACTCGACTCCATCGT
CCTCAACGCCGGCATCGGCGGCTGGACAGGGATCGACTGGCCGCGCGCAA
TCTGGGGAACCCTCACAGACCTCGTACATAGTGTGTCATGGTTCGCGCAC
AAGATAGCCCCCGTGGGGATGATCACCCCTCCTCAAACTACACAGCCTTC
GGAGCCGCGGCTGGGAAGCGTCTTCACGGCGAACGTATTCGGACACTACA
TGCTCTCGCATAACGTCATGGGCCTGCTGCGGAAATCCACCCAGCCGGGA
CGAGTAATCTGGGTATCGAGTATCGAGGCCACCGTGAACCATTTCAATGT
CGATGATATCCAGGGACTGAGGACGAAGGTGCCTTATGAGAGTTCGAAGA
CACTTACGGATATTCTCGCGCTCACGGCCGAGTCGCCTTCCACTCAAAAA
TGGATAGAGGGGTTTTATGCCCCCCCTGATAGTAATGGGGAGAAGGGTGA
AGGGGATGGTGAAGGTACACGCCCACGCATGTACCTCTCGCACCCTGGTG
TCTGCGGAACTGGGATCCTGCCGCTGGCGCTCCCGCTGTTCTGGGCGATG
ATCGCGTCGTTTTATATTGCGCGGTTGCTGGGATCGCCGTGGCATACGCT
GTCGACGTATGCGGGGGCGTGTGCGCCGACGTGGTTGGCTGTGAGTCGGC
AGGATGAGCTGGACGCTGCGGAGGAGGTGTATCGGGCTCATGGTGGGGGG
AAGGTTAAATGGGGGTCGTCGTGTGATCGGTTGGGGAGGGATAAGGCTGT
TTCGACAGAGGTGGATGGGTGGGGACATGGGGGCGTGGTTGGGGAGGCGG
TGGTGATGGAGGATCGGTGTCGGAGGAGGAAGCGCGGGGCGAAGGATTTG
ACGGCGGAGGAGAAGGTCGAGTTTGAGGAGTTAGGAAGGAAGTGTTGGCA
GGGGATGGAGGAGTTGAGGGTGCAGTGGGAGGAGATCTTGGAGAGGGAAG
AAAGGGAGGGCGGTGCTGCTTAG back to topCoding sequence (CDS) from alignment at ch6:2976692..2978164- >KJC3_008771-T1 ID=KJC3_008771-T1|Name=KJC3_008771-T1|organism=Aspergillus niger KJC3|type=CDS|length=2628bp|location=Sequence derived from alignment at ch6:2976692..2978164- (Aspergillus niger KJC3)
CGGCCTCGGCCTCGCCATCTGCGCCCGTCTAATAACGGACTTCCTCACCA
CGCACCCATCAACCCACCACCTAACCATAATCTTCACGACCCGGAGCCCC
AAAAAAGCCTCCTCGACCCTCCACCACCTCCAAACCCTCCTCCCACCTAT
ATCCTCCCCCACTCAATCCTCCAGAATAACCCTCCACCCCGAAACCGTCG
ACCTCTCCTCCCTCCCCTCCGTCCGCGCCCTCTCCCAGCGACTCACAACC
ACCATCCCTAAACTCGACTCCATCGTCCTCAACGCCGGCATCGGCGGCTG
GACAGGGATCGACTGGCCGCGCGCAATCTGGGGAACCCTCACAGACCTCG
TACATAGTGTGTCATGGTTCGCGCACAAGATAGCCCCCGTGGGGATGATC
ACCCCTCCTCAAACTACACAGCCTTCGGAGCCGCGGCTGGGAAGCGTCTT
CACGGCGAACGTATTCGGACACTACATGCTCTCGCATAACGTCATGGGCC
TGCTGCGGAAATCCACCCAGCCGGGACGAGTAATCTGGGTATCGAGTATC
GAGGCCACCGTGAACCATTTCAATGTCGATGATATCCAGGGACTGAGGAC
GAAGGTGCCTTATGAGAGTTCGAAGACACTTACGGATATTCTCGCGCTCA
CGGCCGAGTCGCCTTCCACTCAAAAATGGATAGAGGGGTTTTATGCCCCC
CCTGATAGTAATGGGGAGAAGGGTGAAGGGGATGGTGAAGGTACACGCCC
ACGCATGTACCTCTCGCACCCTGGTGTCTGCGGAACTGGGATCCTGCCGC
TGGCGCTCCCGCTGTTCTGGGCGATGATCGCGTCGTTTTATATTGCGCGG
TTGCTGGGATCGCCGTGGCATACGCTGTCGACGTATGCGGGGGCGTGTGC
GCCGACGTGGTTGGCTGTGAGTCGGCAGGATGAGCTGGACGCTGCGGAGG
AGGTGTATCGGGCTCATGGTGGGGGGAAGGTTAAATGGGGGTCGTCGTGT
GATCGGTTGGGGAGGGATAAGGCTGTTTCGACAGAGGTGGATGGGTGGGG
ACATGGGGGCGTGGTTGGGGAGGCGGTGGTGATGGAGGATCGGTGTCGGA
GGAGGAAGCGCGGGGCGAAGGATTTGACGGCGGAGGAGAAGGTCGAGTTT
GAGGAGTTAGGAAGGAAGTGTTGGCAGGGGATGGAGGAGTTGAGGGTGCA
GTGGGAGGAGATCTTGGAGAGGGAAGAAAGGGAGGGCGGTGCTGCTTAGA
TGGCCGAACTCGCACAAGATGATCTACAGAATCAATTCTACGTACTAGTA
ACCGGCGCAAACAGCGGCCTCGGCCTCGCCATCTGCGCCCGTCTAATAAC
GGACTTCCTCACCACGCACCCATCAACCCACCACCTAACCATAATCTTCA
CGACCCGGAGCCCCAAAAAAGCCTCCTCGACCCTCCACCACCTCCAAACC
CTCCTCCCACCTATATCCTCCCCCACTCAATCCTCCAGAATAACCCTCCA
CCCCGAAACCGTCGACCTCTCCTCCCTCCCCTCCGTCCGCGCCCTCTCCC
AGCGACTCACAACCACCATCCCTAAACTCGACTCCATCGTCCTCAACGCC
GGCATCGGCGGCTGGACAGGGATCGACTGGCCGCGCGCAATCTGGGGAAC
CCTCACAGACCTCGTACATAGTGTGTCATGGTTCGCGCACAAGATAGCCC
CCGTGGGGATGATCACCCCTCCTCAAACTACACAGCCTTCGGAGCCGCGG
CTGGGAAGCGTCTTCACGGCGAACGTATTCGGACACTACATGCTCTCGCA
TAACGTCATGGGCCTGCTGCGGAAATCCACCCAGCCGGGACGAGTAATCT
GGGTATCGAGTATCGAGGCCACCGTGAACCATTTCAATGTCGATGATATC
CAGGGACTGAGGACGAAGGTGCCTTATGAGAGTTCGAAGACACTTACGGA
TATTCTCGCGCTCACGGCCGAGTCGCCTTCCACTCAAAAATGGATAGAGG
GGTTTTATGCCCCCCCTGATAGTAATGGGGAGAAGGGTGAAGGGGATGGT
GAAGGTACACGCCCACGCATGTACCTCTCGCACCCTGGTGTCTGCGGAAC
TGGGATCCTGCCGCTGGCGCTCCCGCTGTTCTGGGCGATGATCGCGTCGT
TTTATATTGCGCGGTTGCTGGGATCGCCGTGGCATACGCTGTCGACGTAT
GCGGGGGCGTGTGCGCCGACGTGGTTGGCTGTGAGTCGGCAGGATGAGCT
GGACGCTGCGGAGGAGGTGTATCGGGCTCATGGTGGGGGGAAGGTTAAAT
GGGGGTCGTCGTGTGATCGGTTGGGGAGGGATAAGGCTGTTTCGACAGAG
GTGGATGGGTGGGGACATGGGGGCGTGGTTGGGGAGGCGGTGGTGATGGA
GGATCGGTGTCGGAGGAGGAAGCGCGGGGCGAAGGATTTGACGGCGGAGG
AGAAGGTCGAGTTTGAGGAGTTAGGAAGGAAGTGTTGGCAGGGGATGGAG
GAGTTGAGGGTGCAGTGGGAGGAGATCTTGGAGAGGGAAGAAAGGGAGGG
CGGTGCTGCTTAGATGGCCGAACTCGCACAAGATGATCTACAGAATCAAT
TCTACGTACTAGTAACCGGCGCAAACAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008771-T1.utr5p1 | KJC3_008771-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262SR7 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2976692..2978164 - |
|
